RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 ARL11Q969Q4 196 aa14.25□□□□□ -0.13
CTDNEP1-207ENST00000572043 CREB3L1Q96BA8 519 aa14.25□□□□□ -0.13
CTDNEP1-207ENST00000572043 CNBD2Q96M20 576 aa14.25□□□□□ -0.13
CTDNEP1-207ENST00000572043 ANKRD60Q9BZ19 345 aa14.25□□□□□ -0.13
CTDNEP1-207ENST00000572043 VCX3BQ9H321 246 aa14.25□□□□□ -0.13
CTDNEP1-207ENST00000572043 ETAA1Q9NY74 926 aa14.25□□□□□ -0.13
CTDNEP1-207ENST00000572043 PEX16Q9Y5Y5 336 aa14.25□□□□□ -0.13
CTDNEP1-207ENST00000572043 IGHV3-43A0A0B4J1X8 118 aa14.24□□□□□ -0.13
CTDNEP1-207ENST00000572043 H3BUI4 141 aa14.24□□□□□ -0.13
CTDNEP1-207ENST00000572043 RGS10O43665 173 aa14.24□□□□□ -0.13
CTDNEP1-207ENST00000572043 MT-ND4P03905 459 aa14.24□□□□□ -0.13
CTDNEP1-207ENST00000572043 CSF1P09603 554 aa14.24□□□□□ -0.13
CTDNEP1-207ENST00000572043 IGHV3-43DP0DP04 118 aa14.24□□□□□ -0.13
CTDNEP1-207ENST00000572043 MNDAP41218 407 aa14.24□□□□□ -0.13
CTDNEP1-207ENST00000572043 PAX5Q02548 391 aa14.24□□□□□ -0.13
CTDNEP1-207ENST00000572043 GPR50Q13585 617 aa14.24□□□□□ -0.13
CTDNEP1-207ENST00000572043 DIAPH2-AS1Q14236 149 aa14.24□□□□□ -0.13
CTDNEP1-207ENST00000572043 IRF3Q14653 427 aa14.24□□□□□ -0.13
CTDNEP1-207ENST00000572043 UNQ9370/PRO34162Q6UXP9 181 aa14.24□□□□□ -0.13
CTDNEP1-207ENST00000572043 CDH26Q8IXH8 852 aa14.24□□□□□ -0.13
CTDNEP1-207ENST00000572043 Q8N2B8 174 aa14.24□□□□□ -0.13
CTDNEP1-207ENST00000572043 MS4A15Q8N5U1 240 aa14.24□□□□□ -0.13
CTDNEP1-207ENST00000572043 DTX3Q8N9I9 347 aa14.24□□□□□ -0.13
CTDNEP1-207ENST00000572043 OR4K15Q8NH41 348 aa14.24□□□□□ -0.13
CTDNEP1-207ENST00000572043 SLC25A33Q9BSK2 321 aa14.24□□□□□ -0.13
CTDNEP1-207ENST00000572043 LINC00574Q9H8X3 128 aa14.24□□□□□ -0.13
CTDNEP1-207ENST00000572043 TRAPPC2LQ9UL33 140 aa14.24□□□□□ -0.13
CTDNEP1-207ENST00000572043 AMMECR1Q9Y4X0 333 aaPredicted RBP14.24□□□□□ -0.13
CTDNEP1-207ENST00000572043 UBE2QL1A1L167 161 aa14.23□□□□□ -0.13
CTDNEP1-207ENST00000572043 SDCBPO00560 298 aaPredicted RBP14.23□□□□□ -0.13
CTDNEP1-207ENST00000572043 KCNAB3O43448 404 aa14.23□□□□□ -0.13
CTDNEP1-207ENST00000572043 MPIG6BO95866 241 aa14.23□□□□□ -0.13
CTDNEP1-207ENST00000572043 CD28P10747 220 aa14.23□□□□□ -0.13
CTDNEP1-207ENST00000572043 VDAC2P45880 294 aaPredicted RBP14.23□□□□□ -0.13
CTDNEP1-207ENST00000572043 MAP2K4P45985 399 aa14.23□□□□□ -0.13
CTDNEP1-207ENST00000572043 OR10K2Q6IF99 312 aa14.23□□□□□ -0.13
CTDNEP1-207ENST00000572043 CCDC144NLQ6NUI1 221 aa14.23□□□□□ -0.13
CTDNEP1-207ENST00000572043 ZNF497Q6ZNH5 498 aa14.23□□□□□ -0.13
CTDNEP1-207ENST00000572043 LRRTM1Q86UE6 522 aa14.23□□□□□ -0.13
CTDNEP1-207ENST00000572043 PRR18Q8N4B5 295 aa14.23□□□□□ -0.13
CTDNEP1-207ENST00000572043 OR10X1Q8NGY0 326 aa14.23□□□□□ -0.13
CTDNEP1-207ENST00000572043 MRPS24Q96EL2 167 aaKnown RBP14.23□□□□□ -0.13
CTDNEP1-207ENST00000572043 UQCC2Q9BRT2 126 aa14.23□□□□□ -0.13
CTDNEP1-207ENST00000572043 KCNK15Q9H427 330 aa14.23□□□□□ -0.13
CTDNEP1-207ENST00000572043 DUSP21Q9H596 190 aa14.23□□□□□ -0.13
CTDNEP1-207ENST00000572043 SPACA1Q9HBV2 294 aa14.23□□□□□ -0.13
CTDNEP1-207ENST00000572043 RCC2Q9P258 522 aaKnown RBP14.23□□□□□ -0.13
CTDNEP1-207ENST00000572043 C15orf65H3BRN8 121 aa14.22□□□□□ -0.13
CTDNEP1-207ENST00000572043 WIPF1O43516 503 aa14.22□□□□□ -0.13
CTDNEP1-207ENST00000572043 GZMHP20718 246 aa14.22□□□□□ -0.13
CTDNEP1-207ENST00000572043 RPS25P62851 125 aaKnown RBP14.22□□□□□ -0.13
CTDNEP1-207ENST00000572043 MADCAM1Q13477 382 aa14.22□□□□□ -0.13
CTDNEP1-207ENST00000572043 ABCA11PQ4W5N1 156 aa14.22□□□□□ -0.13
CTDNEP1-207ENST00000572043 HSD17B12Q53GQ0 312 aa14.22□□□□□ -0.13
CTDNEP1-207ENST00000572043 NKAPLQ5M9Q1 402 aa14.22□□□□□ -0.13
CTDNEP1-207ENST00000572043 SYT6Q5T7P8 510 aaPredicted RBP14.22□□□□□ -0.13
CTDNEP1-207ENST00000572043 GLT8D1Q68CQ7 371 aa14.22□□□□□ -0.13
CTDNEP1-207ENST00000572043 OR56B4Q8NH76 319 aa14.22□□□□□ -0.13
CTDNEP1-207ENST00000572043 CFHR4Q92496 578 aa14.22□□□□□ -0.13
CTDNEP1-207ENST00000572043 Q96M66 194 aa14.22□□□□□ -0.13
CTDNEP1-207ENST00000572043 OOSP1A8MZH6 123 aa14.21□□□□□ -0.13
CTDNEP1-207ENST00000572043 FBXO24O75426 580 aa14.21□□□□□ -0.13
CTDNEP1-207ENST00000572043 LPLP06858 475 aa14.21□□□□□ -0.13
CTDNEP1-207ENST00000572043 SNRNP70P08621 437 aaKnown RBP14.21□□□□□ -0.13
CTDNEP1-207ENST00000572043 SRMP19623 302 aa14.21□□□□□ -0.13
CTDNEP1-207ENST00000572043 CRHBPP24387 322 aa14.21□□□□□ -0.13
CTDNEP1-207ENST00000572043 REG1BP48304 166 aa14.21□□□□□ -0.13
CTDNEP1-207ENST00000572043 DEFA6Q01524 100 aa14.21□□□□□ -0.13
CTDNEP1-207ENST00000572043 NSUN5P1Q3KNT7 163 aa14.21□□□□□ -0.13
CTDNEP1-207ENST00000572043 DRAM1Q8N682 238 aa14.21□□□□□ -0.13
CTDNEP1-207ENST00000572043 OR10A7Q8NGE5 316 aa14.21□□□□□ -0.13
CTDNEP1-207ENST00000572043 AKR1E2Q96JD6 320 aa14.21□□□□□ -0.13
CTDNEP1-207ENST00000572043 RBM14Q96PK6 669 aaKnown RBP14.21□□□□□ -0.13
CTDNEP1-207ENST00000572043 LIN7BQ9HAP6 207 aa14.21□□□□□ -0.13
CTDNEP1-207ENST00000572043 DSCAML1Q8TD84 2053 aa14.21□□□□□ -0.14
CTDNEP1-207ENST00000572043 A0A1W2PPI3 338 aa14.2□□□□□ -0.14
CTDNEP1-207ENST00000572043 C12orf77C9JDV5 145 aa14.2□□□□□ -0.14
CTDNEP1-207ENST00000572043 OR2F2O95006 317 aa14.2□□□□□ -0.14
CTDNEP1-207ENST00000572043 FAM106CPP0CH98 169 aa14.2□□□□□ -0.14
CTDNEP1-207ENST00000572043 HES1Q14469 280 aa14.2□□□□□ -0.14
CTDNEP1-207ENST00000572043 HNF4GQ14541 408 aa14.2□□□□□ -0.14
CTDNEP1-207ENST00000572043 C9orf152Q5JTZ5 239 aa14.2□□□□□ -0.14
CTDNEP1-207ENST00000572043 SIGIRRQ6IA17 410 aa14.2□□□□□ -0.14
CTDNEP1-207ENST00000572043 C16orf82Q7Z2V1 217 aa14.2□□□□□ -0.14
CTDNEP1-207ENST00000572043 OR10V1Q8NGI7 309 aa14.2□□□□□ -0.14
CTDNEP1-207ENST00000572043 OR1L1Q8NH94 360 aa14.2□□□□□ -0.14
CTDNEP1-207ENST00000572043 CST11Q9H112 138 aa14.2□□□□□ -0.14
CTDNEP1-207ENST00000572043 GFOD1Q9NXC2 390 aa14.2□□□□□ -0.14
CTDNEP1-207ENST00000572043 GHRLQ9UBU3 117 aa14.2□□□□□ -0.14
CTDNEP1-207ENST00000572043 ORC5O43913 435 aa14.19□□□□□ -0.14
CTDNEP1-207ENST00000572043 PDCD6O75340 191 aa14.19□□□□□ -0.14
CTDNEP1-207ENST00000572043 SC5DO75845 299 aa14.19□□□□□ -0.14
CTDNEP1-207ENST00000572043 UCHL1P09936 223 aa14.19□□□□□ -0.14
CTDNEP1-207ENST00000572043 VSIG8P0DPA2 414 aa14.19□□□□□ -0.14
CTDNEP1-207ENST00000572043 RCC1P18754 421 aaPredicted RBP14.19□□□□□ -0.14
CTDNEP1-207ENST00000572043 FUT3P21217 361 aa14.19□□□□□ -0.14
CTDNEP1-207ENST00000572043 HSPA13P48723 471 aa14.19□□□□□ -0.14
CTDNEP1-207ENST00000572043 TMEM91Q6ZNR0 172 aa14.19□□□□□ -0.14
CTDNEP1-207ENST00000572043 SLC16A12Q6ZSM3 486 aa14.19□□□□□ -0.14
CTDNEP1-207ENST00000572043 PRSS48Q7RTY5 328 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms