RNA–Protein interactions for RNA: ENST00000571805.5

VPS53-211, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-211ENST00000571805 C17orf78Q8N4C9 275 aa19.41■□□□□ 0.7
VPS53-211ENST00000571805 LFNGQ8NES3 379 aa19.41■□□□□ 0.7
VPS53-211ENST00000571805 OR5C1Q8NGR4 320 aa19.41■□□□□ 0.7
VPS53-211ENST00000571805 ABHD14AQ9BUJ0 271 aa19.41■□□□□ 0.7
VPS53-211ENST00000571805 PBDC1Q9BVG4 233 aa19.41■□□□□ 0.7
VPS53-211ENST00000571805 ZNF44P15621 663 aa19.4■□□□□ 0.7
VPS53-211ENST00000571805 APLNRP35414 380 aa19.4■□□□□ 0.7
VPS53-211ENST00000571805 MCEMP1Q8IX19 187 aa19.4■□□□□ 0.7
VPS53-211ENST00000571805 TAAR3PQ9P1P4 343 aa19.4■□□□□ 0.7
VPS53-211ENST00000571805 OR2W1Q9Y3N9 320 aa19.4■□□□□ 0.7
VPS53-211ENST00000571805 RNF115Q9Y4L5 304 aa19.4■□□□□ 0.7
VPS53-211ENST00000571805 UMAD1C9J7I0 102 aa19.4■□□□□ 0.7
VPS53-211ENST00000571805 F2RP25116 425 aa19.4■□□□□ 0.7
VPS53-211ENST00000571805 DYNLT3P51808 116 aa19.4■□□□□ 0.7
VPS53-211ENST00000571805 TMEM164Q5U3C3 297 aa19.4■□□□□ 0.7
VPS53-211ENST00000571805 OR51I2Q9H344 312 aa19.4■□□□□ 0.7
VPS53-211ENST00000571805 TUBA4BQ9H853 241 aa19.4■□□□□ 0.7
VPS53-211ENST00000571805 COA4Q9NYJ1 87 aa19.4■□□□□ 0.7
VPS53-211ENST00000571805 DLL3Q9NYJ7 618 aa19.4■□□□□ 0.7
VPS53-211ENST00000571805 IL17BQ9UHF5 180 aa19.4■□□□□ 0.7
VPS53-211ENST00000571805 LIPGQ9Y5X9 500 aa19.4■□□□□ 0.7
VPS53-211ENST00000571805 A0A1B0GV50 99 aa19.39■□□□□ 0.69
VPS53-211ENST00000571805 CHST1O43916 411 aa19.39■□□□□ 0.69
VPS53-211ENST00000571805 PAX9P55771 341 aa19.39■□□□□ 0.69
VPS53-211ENST00000571805 CCL20P78556 96 aa19.39■□□□□ 0.69
VPS53-211ENST00000571805 H1FOOQ8IZA3 346 aaPredicted RBP19.39■□□□□ 0.69
VPS53-211ENST00000571805 MDS2Q8NDY4 140 aa19.39■□□□□ 0.69
VPS53-211ENST00000571805 OR1K1Q8NGR3 316 aa19.39■□□□□ 0.69
VPS53-211ENST00000571805 PKIBQ9C010 78 aa19.39■□□□□ 0.69
VPS53-211ENST00000571805 OR51B6Q9H340 312 aa19.39■□□□□ 0.69
VPS53-211ENST00000571805 ZNF98A6NK75 572 aa19.39■□□□□ 0.69
VPS53-211ENST00000571805 RHBDL1O75783 438 aa19.39■□□□□ 0.69
VPS53-211ENST00000571805 CST7O76096 145 aa19.39■□□□□ 0.69
VPS53-211ENST00000571805 CLN3Q13286 438 aa19.39■□□□□ 0.69
VPS53-211ENST00000571805 IGFBP7Q16270 282 aa19.39■□□□□ 0.69
VPS53-211ENST00000571805 SHEQ5VZ18 495 aa19.39■□□□□ 0.69
VPS53-211ENST00000571805 OR2T2Q6IF00 324 aa19.39■□□□□ 0.69
VPS53-211ENST00000571805 SPSB3Q6PJ21 355 aa19.39■□□□□ 0.69
VPS53-211ENST00000571805 IL22RA1Q8N6P7 574 aa19.39■□□□□ 0.69
VPS53-211ENST00000571805 BCL2L2Q92843 193 aaPredicted RBP19.39■□□□□ 0.69
VPS53-211ENST00000571805 C12orf49Q9H741 205 aa19.39■□□□□ 0.69
VPS53-211ENST00000571805 IFT22Q9H7X7 185 aa19.39■□□□□ 0.69
VPS53-211ENST00000571805 A0A0G2JRQ6 117 aa19.38■□□□□ 0.69
VPS53-211ENST00000571805 EPHA1P21709 976 aa19.38■□□□□ 0.69
VPS53-211ENST00000571805 CA6P23280 308 aa19.38■□□□□ 0.69
VPS53-211ENST00000571805 HLA-DRB3P79483 266 aa19.38■□□□□ 0.69
VPS53-211ENST00000571805 BAXQ07812 192 aa19.38■□□□□ 0.69
VPS53-211ENST00000571805 SP5Q6BEB4 398 aaPredicted RBP19.38■□□□□ 0.69
VPS53-211ENST00000571805 ZFP62Q8NB50 900 aaPredicted RBP19.38■□□□□ 0.69
VPS53-211ENST00000571805 OR10J5Q8NHC4 309 aa19.38■□□□□ 0.69
VPS53-211ENST00000571805 RARRES2Q99969 163 aa19.38■□□□□ 0.69
VPS53-211ENST00000571805 CABLES2Q9BTV7 478 aa19.38■□□□□ 0.69
VPS53-211ENST00000571805 C20orf24Q9BUV8 137 aa19.38■□□□□ 0.69
VPS53-211ENST00000571805 GP6Q9HCN6 339 aa19.38■□□□□ 0.69
VPS53-211ENST00000571805 GPR37O15354 613 aa19.37■□□□□ 0.69
VPS53-211ENST00000571805 CD59P13987 128 aa19.37■□□□□ 0.69
VPS53-211ENST00000571805 KCNJ16Q9NPI9 418 aa19.37■□□□□ 0.69
VPS53-211ENST00000571805 KLF13Q9Y2Y9 288 aaPredicted RBP19.37■□□□□ 0.69
VPS53-211ENST00000571805 ARGFXA6NJG6 315 aa19.37■□□□□ 0.69
VPS53-211ENST00000571805 CDRT15L2A8MXV6 281 aa19.37■□□□□ 0.69
VPS53-211ENST00000571805 M0R036 132 aa19.37■□□□□ 0.69
VPS53-211ENST00000571805 HSPA12AO43301 675 aa19.37■□□□□ 0.69
VPS53-211ENST00000571805 NXPH3O95157 252 aa19.37■□□□□ 0.69
VPS53-211ENST00000571805 DAOP14920 347 aa19.37■□□□□ 0.69
VPS53-211ENST00000571805 RNF212Q495C1 297 aa19.37■□□□□ 0.69
VPS53-211ENST00000571805 Q6P435 159 aa19.37■□□□□ 0.69
VPS53-211ENST00000571805 ERRFI1Q9UJM3 462 aaPredicted RBP19.37■□□□□ 0.69
VPS53-211ENST00000571805 MT-ND4LP03901 98 aa19.36■□□□□ 0.69
VPS53-211ENST00000571805 PTAFRP25105 342 aa19.36■□□□□ 0.69
VPS53-211ENST00000571805 MDP1Q86V88 176 aa19.36■□□□□ 0.69
VPS53-211ENST00000571805 OR8G5Q8NG78 346 aa19.36■□□□□ 0.69
VPS53-211ENST00000571805 SMDT1Q9H4I9 107 aa19.36■□□□□ 0.69
VPS53-211ENST00000571805 KIAA1324LA8MWY0 1029 aaPredicted RBP19.36■□□□□ 0.69
VPS53-211ENST00000571805 SLC33A1O00400 549 aaPredicted RBP19.36■□□□□ 0.69
VPS53-211ENST00000571805 OR13C7P0DN81 318 aa19.36■□□□□ 0.69
VPS53-211ENST00000571805 SLC10A1Q14973 349 aa19.36■□□□□ 0.69
VPS53-211ENST00000571805 TMEM217Q8N7C4 229 aa19.36■□□□□ 0.69
VPS53-211ENST00000571805 GPR146Q96CH1 333 aa19.36■□□□□ 0.69
VPS53-211ENST00000571805 KLRC4-KLRK1H3BQV0 150 aa19.35■□□□□ 0.69
VPS53-211ENST00000571805 MT-CO3P00414 261 aa19.35■□□□□ 0.69
VPS53-211ENST00000571805 RAB5BP61020 215 aa19.35■□□□□ 0.69
VPS53-211ENST00000571805 FBXW9Q5XUX1 488 aa19.35■□□□□ 0.69
VPS53-211ENST00000571805 SNIP1Q8TAD8 396 aaKnown RBP19.35■□□□□ 0.69
VPS53-211ENST00000571805 SFT2D1Q8WV19 159 aa19.35■□□□□ 0.69
VPS53-211ENST00000571805 ISOC2Q96AB3 205 aa19.35■□□□□ 0.69
VPS53-211ENST00000571805 FAM186AA6NE01 2351 aa19.35■□□□□ 0.69
VPS53-211ENST00000571805 GPR179Q6PRD1 2367 aa19.35■□□□□ 0.69
VPS53-211ENST00000571805 PCP4L1A6NKN8 68 aa19.35■□□□□ 0.69
VPS53-211ENST00000571805 J3QT63 122 aa19.35■□□□□ 0.69
VPS53-211ENST00000571805 DEGS1O15121 323 aa19.35■□□□□ 0.69
VPS53-211ENST00000571805 WNT2P09544 360 aa19.35■□□□□ 0.69
VPS53-211ENST00000571805 ZNF154Q13106 437 aa19.35■□□□□ 0.69
VPS53-211ENST00000571805 SPATA46Q5T0L3 261 aa19.35■□□□□ 0.69
VPS53-211ENST00000571805 ZNF295-AS1Q8N0V1 137 aa19.35■□□□□ 0.69
VPS53-211ENST00000571805 DEFB123Q8N688 67 aa19.35■□□□□ 0.69
VPS53-211ENST00000571805 GNPNAT1Q96EK6 184 aaPredicted RBP19.35■□□□□ 0.69
VPS53-211ENST00000571805 OR1A1Q9P1Q5 309 aa19.35■□□□□ 0.69
VPS53-211ENST00000571805 RBFOX3A6NFN3 312 aa19.34■□□□□ 0.69
VPS53-211ENST00000571805 IGLV2-14P01704 120 aa19.34■□□□□ 0.69
VPS53-211ENST00000571805 PSG2P11465 335 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms