RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 SPIN3Q5JUX0 258 aa8.63□□□□□ -1.03
VPS53-207ENST00000570510 ZNF529Q6P280 563 aa8.63□□□□□ -1.03
VPS53-207ENST00000570510 CDH26Q8IXH8 852 aa8.63□□□□□ -1.03
VPS53-207ENST00000570510 SMIM19Q96E16 107 aa8.63□□□□□ -1.03
VPS53-207ENST00000570510 CEP19Q96LK0 163 aa8.63□□□□□ -1.03
VPS53-207ENST00000570510 OPALINQ96PE5 141 aa8.63□□□□□ -1.03
VPS53-207ENST00000570510 OR5B12Q96R08 314 aa8.63□□□□□ -1.03
VPS53-207ENST00000570510 TTTY10Q9BZA0 68 aa8.63□□□□□ -1.03
VPS53-207ENST00000570510 ZCCHC4Q9H5U6 513 aa8.63□□□□□ -1.03
VPS53-207ENST00000570510 TUBA4BQ9H853 241 aa8.63□□□□□ -1.03
VPS53-207ENST00000570510 ZNF286AQ9HBT8 521 aa8.63□□□□□ -1.03
VPS53-207ENST00000570510 AMBNQ9NP70 447 aa8.63□□□□□ -1.03
VPS53-207ENST00000570510 FKBP14Q9NWM8 211 aa8.63□□□□□ -1.03
VPS53-207ENST00000570510 SCN3BQ9NY72 215 aa8.63□□□□□ -1.03
VPS53-207ENST00000570510 FAM230AA0A1W2PPH8 454 aa8.62□□□□□ -1.03
VPS53-207ENST00000570510 PSPNO60542 156 aa8.62□□□□□ -1.03
VPS53-207ENST00000570510 GPR12P47775 334 aa8.62□□□□□ -1.03
VPS53-207ENST00000570510 P2RX3P56373 397 aa8.62□□□□□ -1.03
VPS53-207ENST00000570510 ST3GAL4Q11206 333 aa8.62□□□□□ -1.03
VPS53-207ENST00000570510 ZNF146Q15072 292 aa8.62□□□□□ -1.03
VPS53-207ENST00000570510 ZNF485Q8NCK3 441 aa8.62□□□□□ -1.03
VPS53-207ENST00000570510 PXT1Q8NFP0 134 aa8.62□□□□□ -1.03
VPS53-207ENST00000570510 OR13C3Q8NGS6 347 aa8.62□□□□□ -1.03
VPS53-207ENST00000570510 OR9G1Q8NH87 305 aa8.62□□□□□ -1.03
VPS53-207ENST00000570510 CNIH3Q8TBE1 160 aa8.62□□□□□ -1.03
VPS53-207ENST00000570510 DCUN1D4Q92564 292 aa8.62□□□□□ -1.03
VPS53-207ENST00000570510 GGHQ92820 318 aa8.62□□□□□ -1.03
VPS53-207ENST00000570510 EMG1Q92979 244 aaKnown RBP8.62□□□□□ -1.03
VPS53-207ENST00000570510 OR4C12Q96R67 309 aa8.62□□□□□ -1.03
VPS53-207ENST00000570510 RASL11BQ9BPW5 248 aa8.62□□□□□ -1.03
VPS53-207ENST00000570510 ANKRD60Q9BZ19 345 aa8.62□□□□□ -1.03
VPS53-207ENST00000570510 TAS2R3Q9NYW6 316 aa8.62□□□□□ -1.03
VPS53-207ENST00000570510 DHDHQ9UQ10 334 aa8.62□□□□□ -1.03
VPS53-207ENST00000570510 ERGIC3Q9Y282 383 aa8.62□□□□□ -1.03
VPS53-207ENST00000570510 PCLOQ9Y6V0 5065 aa8.62□□□□□ -1.03
VPS53-207ENST00000570510 FAM90A18PA6NE21 464 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 FAM90A16PA6NEW6 464 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 FAM90A20PA6NIJ5 464 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 FAM90A9PA6NNJ1 464 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 FAM90A12PA8MX19 464 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 FAM90A5PA8MXJ8 464 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 LY6LH3BQJ8 138 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 MAGEB3O15480 346 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 SULT1B1O43704 296 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 MRPS14O60783 128 aaKnown RBP8.61□□□□□ -1.03
VPS53-207ENST00000570510 FAM90A15PP0C7V4 464 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 FAM90A13PP0C7W8 464 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 FAM90A14PP0C7W9 464 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 FAM90A24PP0C7X0 464 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 OCM2P0CE71 109 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 OCMP0CE72 109 aaPredicted RBP8.61□□□□□ -1.03
VPS53-207ENST00000570510 OR5H8P0DN80 308 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 ARSBP15848 533 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 MAPK3P27361 379 aaPredicted RBP8.61□□□□□ -1.03
VPS53-207ENST00000570510 CD34P28906 385 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 ERP29P30040 261 aaKnown RBP8.61□□□□□ -1.03
VPS53-207ENST00000570510 PTGFRP43088 359 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 ETV1P50549 477 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 RAB7AP51149 207 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 MTCP1P56278 107 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 PDZK1IP1Q13113 114 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 MADCAM1Q13477 382 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 SMN1Q16637 294 aaKnown RBP8.61□□□□□ -1.03
VPS53-207ENST00000570510 C6orf141Q5SZD1 244 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 DMKNQ6E0U4 476 aaPredicted RBP8.61□□□□□ -1.03
VPS53-207ENST00000570510 LYPD6Q86Y78 171 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 TGIF2LXQ8IUE1 241 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 STX19Q8N4C7 294 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 MS4A15Q8N5U1 240 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 RNF152Q8N8N0 203 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 CHST4Q8NCG5 386 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 OR52N4Q8NGI2 321 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 LINC00476Q8WZB0 136 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 SLAMF9Q96A28 289 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 FGGYQ96C11 551 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 ADAT3Q96EY9 351 aaPredicted RBP8.61□□□□□ -1.03
VPS53-207ENST00000570510 ABCG5Q9H222 651 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 NCOR1P1Q9H4R4 102 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 ISG20L2Q9H9L3 353 aaKnown RBP8.61□□□□□ -1.03
VPS53-207ENST00000570510 LIN7CQ9NUP9 197 aaKnown RBP8.61□□□□□ -1.03
VPS53-207ENST00000570510 PAK1IP1Q9NWT1 392 aaPredicted RBP8.61□□□□□ -1.03
VPS53-207ENST00000570510 ING3Q9NXR8 418 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 RAB26Q9ULW5 256 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 VSIG4Q9Y279 399 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 TPRKBQ9Y3C4 175 aa8.61□□□□□ -1.03
VPS53-207ENST00000570510 IGKV1-9A0A0C4DH69 117 aa8.6□□□□□ -1.03
VPS53-207ENST00000570510 A6NIN4 97 aa8.6□□□□□ -1.03
VPS53-207ENST00000570510 MYL12BO14950 172 aa8.6□□□□□ -1.03
VPS53-207ENST00000570510 ZNF780AO75290 641 aaPredicted RBP8.6□□□□□ -1.03
VPS53-207ENST00000570510 KDM4BO94953 1096 aa8.6□□□□□ -1.03
VPS53-207ENST00000570510 IGHG4P01861 327 aa8.6□□□□□ -1.03
VPS53-207ENST00000570510 OR8U9P0C7N5 309 aa8.6□□□□□ -1.03
VPS53-207ENST00000570510 RAB3AP20336 220 aa8.6□□□□□ -1.03
VPS53-207ENST00000570510 DUSP1P28562 367 aa8.6□□□□□ -1.03
VPS53-207ENST00000570510 MTNR1BP49286 362 aa8.6□□□□□ -1.03
VPS53-207ENST00000570510 SNU13P55769 128 aaKnown RBP8.6□□□□□ -1.03
VPS53-207ENST00000570510 WNT4P56705 351 aa8.6□□□□□ -1.03
VPS53-207ENST00000570510 PAX5Q02548 391 aa8.6□□□□□ -1.03
VPS53-207ENST00000570510 HAGHQ16775 308 aa8.6□□□□□ -1.03
VPS53-207ENST00000570510 ELP2Q6IA86 826 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms