RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	OR52B2	Q96RD2	323 aa		1.09	□□□□□ -2.23
UBR1-209	ENST00000569243	EBNA1BP2	Q99848	306 aa	Known RBP	1.09	□□□□□ -2.23
UBR1-209	ENST00000569243	PECR	Q9BY49	303 aa		1.09	□□□□□ -2.23
UBR1-209	ENST00000569243	SLIRP	Q9GZT3	109 aa	Known RBP	1.09	□□□□□ -2.23
UBR1-209	ENST00000569243	COA1	Q9GZY4	146 aa		1.09	□□□□□ -2.23
UBR1-209	ENST00000569243	FAM107B	Q9H098	131 aa		1.09	□□□□□ -2.23
UBR1-209	ENST00000569243	MS4A6A	Q9H2W1	248 aa		1.09	□□□□□ -2.23
UBR1-209	ENST00000569243	OR51I1	Q9H343	314 aa		1.09	□□□□□ -2.23
UBR1-209	ENST00000569243	TRABD	Q9H4I3	376 aa		1.09	□□□□□ -2.23
UBR1-209	ENST00000569243	MYOZ1	Q9NP98	299 aa	Predicted RBP	1.09	□□□□□ -2.23
UBR1-209	ENST00000569243	MED4	Q9NPJ6	270 aa		1.09	□□□□□ -2.23
UBR1-209	ENST00000569243	SLC2A9	Q9NRM0	540 aa		1.09	□□□□□ -2.23
UBR1-209	ENST00000569243	RGS18	Q9NS28	235 aa		1.09	□□□□□ -2.23
UBR1-209	ENST00000569243	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	1.09	□□□□□ -2.23
UBR1-209	ENST00000569243	RBFOX1	Q9NWB1	397 aa	Known RBP	1.09	□□□□□ -2.23
UBR1-209	ENST00000569243	FAM206A	Q9NX38	181 aa		1.09	□□□□□ -2.23
UBR1-209	ENST00000569243	VAX2	Q9UIW0	290 aa		1.09	□□□□□ -2.23
UBR1-209	ENST00000569243	ANXA10	Q9UJ72	324 aa		1.09	□□□□□ -2.23
UBR1-209	ENST00000569243	STOML2	Q9UJZ1	356 aa		1.09	□□□□□ -2.23
UBR1-209	ENST00000569243	RAB23	Q9ULC3	237 aa		1.09	□□□□□ -2.23
UBR1-209	ENST00000569243	SLC22A7	Q9Y694	548 aa		1.09	□□□□□ -2.23
UBR1-209	ENST00000569243	USH1C	Q9Y6N9	552 aa		1.09	□□□□□ -2.23
UBR1-209	ENST00000569243	ZBED9	Q6R2W3	1325 aa		1.09	□□□□□ -2.24
UBR1-209	ENST00000569243	NACAD	O15069	1562 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	PCF11	O94913	1555 aa	Known RBP	1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	HELZ2	Q9BYK8	2649 aa	Known RBP	1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	PRRC2B	Q5JSZ5	2229 aa	Known RBP	1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	COL11A1	P12107	1806 aa	Predicted RBP	1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	CCDC144A	A2RUR9	1427 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	PBRM1	Q86U86	1689 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	SNAPC4	Q5SXM2	1469 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	GNG14	A0A1W2PPG7	69 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	DAPL1	A0PJW8	107 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	FUOM	A2VDF0	154 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	CEACAM18	A8MTB9	384 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	LINC01619	G3V211	115 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243		H3BP45	60 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243		M0R036	132 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	TNFRSF11B	O00300	401 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	KPNA3	O00505	521 aa	Predicted RBP	1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	MFNG	O00587	321 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	TAAR5	O14804	337 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	FABP7	O15540	132 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	GATC	O43716	136 aa	Known RBP	1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	SSNA1	O43805	119 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	FADS1	O60427	444 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	GATB	O75879	557 aa	Known RBP	1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	TTC4	O95801	387 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	APOE	P02649	317 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	ISG15	P05161	165 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	PFN1	P07737	140 aa	Known RBP	1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	C8orf88	P0DMB2	117 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	HIST1H1E	P10412	219 aa	Known RBP	1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	HRES1	P13985	223 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	GABRA1	P14867	456 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	AKR1C4	P17516	323 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	CXCL3	P19876	107 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	HTR1D	P28221	377 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	RPL12	P30050	165 aa	Known RBP	1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	TSPO	P30536	169 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	PYCR1	P32322	319 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	RPA3	P35244	121 aa	Predicted RBP	1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	CD79B	P40259	229 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	PSMD8	P48556	350 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	ACOT2	P49753	483 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	OR4D2	P58180	307 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	MTPN	P58546	118 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	TAS2R39	P59534	338 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	TAS2R46	P59540	309 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	KRTAP12-1	P59990	96 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	ARF6	P62330	175 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	OR1Q1	Q15612	314 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	ALX1	Q15699	326 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	LRRC75B	Q2VPJ9	315 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	TMEM176B	Q3YBM2	270 aa	Predicted RBP	1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	ZCWPW2	Q504Y3	356 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	C1orf195	Q5TG92	126 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	LRRN1	Q6UXK5	716 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	RASSF6	Q6ZTQ3	369 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	SMIM15	Q7Z3B0	74 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	LYG2	Q86SG7	212 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	GID4	Q8IVV7	300 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	CPNE9	Q8IYJ1	553 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	ZCCHC24	Q8N2G6	241 aa	Known RBP	1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	SPIC	Q8N5J4	248 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	ACBD4	Q8NC06	268 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	CHST4	Q8NCG5	386 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	PXT1	Q8NFP0	134 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	OR4C13	Q8NGP0	309 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	OR6Q1	Q8NGQ2	317 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	OR11L1	Q8NGX0	322 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	OR10X1	Q8NGY0	326 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	OR6K3	Q8NGY3	331 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	SPPL2B	Q8TCT7	592 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	SLC37A2	Q8TED4	501 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	FAM172A	Q8WUF8	416 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	BLNK	Q8WV28	456 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	RASSF5	Q8WWW0	418 aa		1.08	□□□□□ -2.24
UBR1-209	ENST00000569243	TMEM159	Q96B96	161 aa		1.08	□□□□□ -2.24

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms