RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 RFESDQ8TAC1 157 aa6.63□□□□□ -1.35
SMG1-216ENST00000569122 APOL4Q9BPW4 351 aa6.63□□□□□ -1.35
SMG1-216ENST00000569122 FAM110AQ9BQ89 295 aa6.63□□□□□ -1.35
SMG1-216ENST00000569122 ZNF251Q9BRH9 671 aa6.63□□□□□ -1.35
SMG1-216ENST00000569122 PPIL3Q9H2H8 161 aaKnown RBP6.63□□□□□ -1.35
SMG1-216ENST00000569122 SLA2Q9H6Q3 261 aa6.63□□□□□ -1.35
SMG1-216ENST00000569122 SLC2A8Q9NY64 477 aa6.63□□□□□ -1.35
SMG1-216ENST00000569122 ETAA1Q9NY74 926 aa6.63□□□□□ -1.35
SMG1-216ENST00000569122 SIGLEC8Q9NYZ4 499 aa6.63□□□□□ -1.35
SMG1-216ENST00000569122 H2AFY2Q9P0M6 372 aaPredicted RBP6.63□□□□□ -1.35
SMG1-216ENST00000569122 KIAA1456Q9P272 454 aa6.63□□□□□ -1.35
SMG1-216ENST00000569122 KIF25Q9UIL4 384 aa6.63□□□□□ -1.35
SMG1-216ENST00000569122 A0A1W2PN81 502 aa6.62□□□□□ -1.35
SMG1-216ENST00000569122 H0YJX3 145 aa6.62□□□□□ -1.35
SMG1-216ENST00000569122 NDUFB8O95169 186 aa6.62□□□□□ -1.35
SMG1-216ENST00000569122 MRPL3P09001 348 aaKnown RBP6.62□□□□□ -1.35
SMG1-216ENST00000569122 UBCP0CG48 685 aaKnown RBP6.62□□□□□ -1.35
SMG1-216ENST00000569122 MED14OSP0DP75 135 aa6.62□□□□□ -1.35
SMG1-216ENST00000569122 SLC2A2P11168 524 aaPredicted RBP6.62□□□□□ -1.35
SMG1-216ENST00000569122 SNRPBP14678 240 aaKnown RBP6.62□□□□□ -1.35
SMG1-216ENST00000569122 ZNF20P17024 532 aa6.62□□□□□ -1.35
SMG1-216ENST00000569122 CHRNA7P36544 502 aa6.62□□□□□ -1.35
SMG1-216ENST00000569122 MAGEA2P43356 314 aa6.62□□□□□ -1.35
SMG1-216ENST00000569122 CDK5Q00535 292 aa6.62□□□□□ -1.35
SMG1-216ENST00000569122 TMEM30BQ3MIR4 351 aa6.62□□□□□ -1.35
SMG1-216ENST00000569122 STEAP3Q658P3 488 aa6.62□□□□□ -1.35
SMG1-216ENST00000569122 ZNF660Q6AZW8 331 aaPredicted RBP6.62□□□□□ -1.35
SMG1-216ENST00000569122 LGALS9CQ6DKI2 356 aa6.62□□□□□ -1.35
SMG1-216ENST00000569122 RPP25LQ8N5L8 163 aaKnown RBP6.62□□□□□ -1.35
SMG1-216ENST00000569122 GIPC3Q8TF64 312 aa6.62□□□□□ -1.35
SMG1-216ENST00000569122 OPALINQ96PE5 141 aa6.62□□□□□ -1.35
SMG1-216ENST00000569122 FEVQ99581 238 aa6.62□□□□□ -1.35
SMG1-216ENST00000569122 NIPSNAP1Q9BPW8 284 aa6.62□□□□□ -1.35
SMG1-216ENST00000569122 MAGIXQ9H6Y5 334 aa6.62□□□□□ -1.35
SMG1-216ENST00000569122 RETNQ9HD89 108 aa6.62□□□□□ -1.35
SMG1-216ENST00000569122 FAM53CQ9NYF3 392 aa6.62□□□□□ -1.35
SMG1-216ENST00000569122 DHDHQ9UQ10 334 aa6.62□□□□□ -1.35
SMG1-216ENST00000569122 IGHV7-81A0A0B4J1V7 117 aa6.61□□□□□ -1.35
SMG1-216ENST00000569122 A0A0G2JLM5 398 aa6.61□□□□□ -1.35
SMG1-216ENST00000569122 A0A1W2PPE3 182 aa6.61□□□□□ -1.35
SMG1-216ENST00000569122 SDCBPO00560 298 aaPredicted RBP6.61□□□□□ -1.35
SMG1-216ENST00000569122 ARPC2O15144 300 aa6.61□□□□□ -1.35
SMG1-216ENST00000569122 RPP14O95059 124 aaKnown RBP6.61□□□□□ -1.35
SMG1-216ENST00000569122 BRI3O95415 125 aa6.61□□□□□ -1.35
SMG1-216ENST00000569122 MT-ND2P03891 347 aa6.61□□□□□ -1.35
SMG1-216ENST00000569122 OSMP13725 252 aa6.61□□□□□ -1.35
SMG1-216ENST00000569122 SSTR5P35346 364 aa6.61□□□□□ -1.35
SMG1-216ENST00000569122 ZNF137PP52743 207 aa6.61□□□□□ -1.35
SMG1-216ENST00000569122 CRIP2P52943 208 aaPredicted RBP6.61□□□□□ -1.35
SMG1-216ENST00000569122 ODF4Q2M2E3 257 aa6.61□□□□□ -1.35
SMG1-216ENST00000569122 C5orf64Q2M2E5 130 aa6.61□□□□□ -1.35
SMG1-216ENST00000569122 TMEM244Q5VVB8 128 aa6.61□□□□□ -1.35
SMG1-216ENST00000569122 SLC25A48Q6ZT89 311 aaKnown RBP6.61□□□□□ -1.35
SMG1-216ENST00000569122 HAPLN4Q86UW8 402 aa6.61□□□□□ -1.35
SMG1-216ENST00000569122 SLC35F2Q8IXU6 374 aa6.61□□□□□ -1.35
SMG1-216ENST00000569122 BBS1Q8NFJ9 593 aa6.61□□□□□ -1.35
SMG1-216ENST00000569122 OR9G4Q8NGQ1 327 aa6.61□□□□□ -1.35
SMG1-216ENST00000569122 ARL11Q969Q4 196 aa6.61□□□□□ -1.35
SMG1-216ENST00000569122 CPNE2Q96FN4 548 aaPredicted RBP6.61□□□□□ -1.35
SMG1-216ENST00000569122 RHOVQ96L33 236 aa6.61□□□□□ -1.35
SMG1-216ENST00000569122 SPACA5Q96QH8 159 aa6.61□□□□□ -1.35
SMG1-216ENST00000569122 PRRG3Q9BZD7 231 aa6.61□□□□□ -1.35
SMG1-216ENST00000569122 FGFR1OP2Q9NVK5 253 aa6.61□□□□□ -1.35
SMG1-216ENST00000569122 CLN6Q9NWW5 311 aa6.61□□□□□ -1.35
SMG1-216ENST00000569122 GFOD1Q9NXC2 390 aa6.61□□□□□ -1.35
SMG1-216ENST00000569122 KMT2AQ03164 3969 aa6.61□□□□□ -1.35
SMG1-216ENST00000569122 HECTD4Q9Y4D8 3996 aa6.6□□□□□ -1.35
SMG1-216ENST00000569122 IGKV1-9A0A0C4DH69 117 aa6.6□□□□□ -1.35
SMG1-216ENST00000569122 IGKV1-12A0A0C4DH73 117 aa6.6□□□□□ -1.35
SMG1-216ENST00000569122 C13orf42A0A1B0GVH6 325 aa6.6□□□□□ -1.35
SMG1-216ENST00000569122 PRR32B1ATL7 298 aa6.6□□□□□ -1.35
SMG1-216ENST00000569122 ZNF736B4DX44 427 aaPredicted RBP6.6□□□□□ -1.35
SMG1-216ENST00000569122 HSPB6O14558 160 aa6.6□□□□□ -1.35
SMG1-216ENST00000569122 NBR2O15453 112 aa6.6□□□□□ -1.35
SMG1-216ENST00000569122 LANCL1O43813 399 aa6.6□□□□□ -1.35
SMG1-216ENST00000569122 ORC5O43913 435 aa6.6□□□□□ -1.35
SMG1-216ENST00000569122 AIREO43918 545 aa6.6□□□□□ -1.35
SMG1-216ENST00000569122 SULT1C4O75897 302 aa6.6□□□□□ -1.35
SMG1-216ENST00000569122 IGKV1D-12P01611 117 aa6.6□□□□□ -1.35
SMG1-216ENST00000569122 IGHV3-11P01762 117 aa6.6□□□□□ -1.35
SMG1-216ENST00000569122 RPSAP08865 295 aaKnown RBP6.6□□□□□ -1.35
SMG1-216ENST00000569122 TMEM225BP0DP42 221 aa6.6□□□□□ -1.35
SMG1-216ENST00000569122 ATF4P18848 351 aaPredicted RBP6.6□□□□□ -1.35
SMG1-216ENST00000569122 PRDX6P30041 224 aa6.6□□□□□ -1.35
SMG1-216ENST00000569122 BLVRBP30043 206 aaPredicted RBP6.6□□□□□ -1.35
SMG1-216ENST00000569122 TPPP2P59282 170 aa6.6□□□□□ -1.35
SMG1-216ENST00000569122 CD81P60033 236 aa6.6□□□□□ -1.35
SMG1-216ENST00000569122 ACTBP60709 375 aa6.6□□□□□ -1.35
SMG1-216ENST00000569122 PPP1R8Q12972 351 aaKnown RBP6.6□□□□□ -1.35
SMG1-216ENST00000569122 PMS2P11Q13670 270 aa6.6□□□□□ -1.35
SMG1-216ENST00000569122 KLF5Q13887 457 aaPredicted RBP6.6□□□□□ -1.35
SMG1-216ENST00000569122 IL13RA2Q14627 380 aa6.6□□□□□ -1.35
SMG1-216ENST00000569122 CDK5R1Q15078 307 aa6.6□□□□□ -1.35
SMG1-216ENST00000569122 ECSCRQ19T08 205 aa6.6□□□□□ -1.35
SMG1-216ENST00000569122 FAM98BQ52LJ0 330 aaKnown RBP6.6□□□□□ -1.35
SMG1-216ENST00000569122 AKIRIN2Q53H80 203 aa6.6□□□□□ -1.35
SMG1-216ENST00000569122 ACTBL2Q562R1 376 aa6.6□□□□□ -1.35
SMG1-216ENST00000569122 RSBN1Q5VWQ0 802 aaPredicted RBP6.6□□□□□ -1.35
SMG1-216ENST00000569122 ELP2Q6IA86 826 aa6.6□□□□□ -1.35
SMG1-216ENST00000569122 CD200R1LQ6Q8B3 271 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms