RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 STX19Q8N4C7 294 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 NKAIN3Q8N8D7 197 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 DTX3Q8N9I9 347 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 ZNF565Q8N9K5 539 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 OR10A7Q8NGE5 316 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 OR56B4Q8NH76 319 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 RFESDQ8TAC1 157 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 TOMM40LQ969M1 308 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 CREB3L1Q96BA8 519 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 Q96M66 194 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 OR5M11Q96RB7 305 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 CITED2Q99967 270 aaPredicted RBP6.23□□□□□ -1.41
CDH3-209ENST00000569080 SLC25A33Q9BSK2 321 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 BARHL1Q9BZE3 327 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 DCLRE1BQ9H816 532 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 CHCHD3Q9NX63 227 aaKnown RBP6.23□□□□□ -1.41
CDH3-209ENST00000569080 CKLFQ9UBR5 152 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 ING4Q9UNL4 249 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 MRPS28Q9Y2Q9 187 aaKnown RBP6.23□□□□□ -1.41
CDH3-209ENST00000569080 NOTCH3Q9UM47 2321 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 A0A1W2PPE3 182 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 SH2D7A6NKC9 451 aaPredicted RBP6.22□□□□□ -1.41
CDH3-209ENST00000569080 C12orf77C9JDV5 145 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 G3V4G9 280 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 TOR1AO14656 332 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 MT-ND4P03905 459 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 CSTBP04080 98 aaKnown RBP6.22□□□□□ -1.41
CDH3-209ENST00000569080 MAS1P04201 325 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 SNRNP70P08621 437 aaKnown RBP6.22□□□□□ -1.41
CDH3-209ENST00000569080 CD37P11049 281 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 MGMTP16455 207 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 BRS3P32247 399 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 GNG10P50151 68 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 PRRX1P54821 245 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 CD83Q01151 205 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 MADCAM1Q13477 382 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 GPR176Q14439 515 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 RBM39Q14498 530 aaKnown RBP6.22□□□□□ -1.41
CDH3-209ENST00000569080 LTC4SQ16873 150 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 BEAN1Q3B7T3 259 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 ABCA11PQ4W5N1 156 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 C6orf141Q5SZD1 244 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 AWAT2Q6E213 333 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 C10orf99Q6UWK7 81 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 UNQ9370/PRO34162Q6UXP9 181 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 Q6ZPA2 131 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 SLC16A12Q6ZSM3 486 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 THNSL2Q86YJ6 484 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 JAGN1Q8N5M9 183 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 LINC00311Q8N616 119 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 DRAM1Q8N682 238 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 C5orf56Q8N8D9 126 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 C8orf31Q8N9H6 132 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 ZNF439Q8NDP4 499 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 OR52M1Q8NGK5 317 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 UBALD1Q8TB05 177 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 ST6GALNAC6Q969X2 333 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 RPEQ96AT9 228 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 MRPS24Q96EL2 167 aaKnown RBP6.22□□□□□ -1.41
CDH3-209ENST00000569080 UQCC2Q9BRT2 126 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 MND1Q9BWT6 205 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 ANKRD60Q9BZ19 345 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 VCXQ9H320 206 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 BANF2Q9H503 90 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 SPACA1Q9HBV2 294 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 PCDHB16Q9NRJ7 776 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 GFOD1Q9NXC2 390 aa6.22□□□□□ -1.41
CDH3-209ENST00000569080 AMMECR1Q9Y4X0 333 aaPredicted RBP6.22□□□□□ -1.41
CDH3-209ENST00000569080 FAM90A10PA6NDY2 464 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 FAM90A7PA6NKC0 464 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 FAM90A23PA8MXZ1 464 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 AIPO00170 330 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 HSD17B6O14756 317 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 SLC31A2O15432 143 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 ORC5O43913 435 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 LPLP06858 475 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 MYF6P23409 242 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 MAPK3P27361 379 aaPredicted RBP6.21□□□□□ -1.42
CDH3-209ENST00000569080 VHLP40337 213 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 MNDAP41218 407 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 ARHGDIBP52566 201 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 ZNF137PP52743 207 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 ZNF816Q0VGE8 651 aaPredicted RBP6.21□□□□□ -1.42
CDH3-209ENST00000569080 EBI3Q14213 229 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 SPHARQ15513 63 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 NSUN5P1Q3KNT7 163 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 Q3ZCU0 254 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 C1orf100Q5SVJ3 147 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 ATAD3CQ5T2N8 411 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 RAB12Q6IQ22 244 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 IZUMO1Q8IYV9 350 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 OR8H3Q8N146 312 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 Q8N6K4 173 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 PHYHIPQ92561 330 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 THRSPQ92748 146 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 AKR1E2Q96JD6 320 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 S100A13Q99584 98 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 GFI1Q99684 422 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 DUSP21Q9H596 190 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 MBNL3Q9NUK0 354 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms