RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-215	ENST00000569001	FOXA1	P55317	472 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	DLX6	P56179	175 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	RAB8A	P61006	207 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	CLEC12B	Q2HXU8	276 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	ACTBL2	Q562R1	376 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	FAM45BP	Q6NSW5	357 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	WDR59	Q6PJI9	974 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	FAM131A	Q6UXB0	335 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	CYHR1	Q6ZMK1	362 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	TMEM144	Q7Z5S9	345 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	DPPA2	Q7Z7J5	298 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	MARCH3	Q86UD3	253 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	NIT1	Q86X76	327 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	CPNE9	Q8IYJ1	553 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	ZFP82	Q8N141	532 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	BPIFB6	Q8NFQ5	453 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	OR5L1	Q8NGL2	311 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	OR4C13	Q8NGP0	309 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	RNASEH2C	Q8TDP1	164 aa	Known RBP	0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	TWIST2	Q8WVJ9	160 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	APOBEC3D	Q96AK3	386 aa	Predicted RBP	0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	CMBL	Q96DG6	245 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	PGLYRP3	Q96LB9	341 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	ZNF426	Q9BUY5	554 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	OR51E2	Q9H255	320 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	TXNIP	Q9H3M7	391 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	VSIR	Q9H7M9	311 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	EURL	Q9NYK6	297 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	ZNF492	Q9P255	531 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	NOSIP	Q9Y314	301 aa	Known RBP	0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	TBL2	Q9Y4P3	447 aa	Known RBP	0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	ZNF706	Q9Y5V0	76 aa	Predicted RBP	0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	SSH2	Q76I76	1423 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	RIMS2	Q9UQ26	1411 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	CEP170	Q5SW79	1584 aa		0.94	□□□□□ -2.26
BBS4-215	ENST00000569001	DNMT1	P26358	1616 aa	Known RBP	0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	CLUH	O75153	1309 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	GOLGA6L10	A6NI86	522 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001		A8MWP4	228 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001		D6RAR5	112 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	FTCDNL1	E5RQL4	147 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	C15orf65	H3BRN8	121 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	GPR171	O14626	319 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	AQP9	O43315	295 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	DENR	O43583	198 aa	Known RBP	0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	MPZL2	O60487	215 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	LTA	P01374	205 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	OPN1SW	P03999	348 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	PSKH1	P11801	424 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	SPN	P16150	400 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	HIST1H1C	P16403	213 aa	Known RBP	0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	PYCR1	P32322	319 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	ACTR1B	P42025	376 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	HSPA13	P48723	471 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	EMP2	P54851	167 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	GTF2B	Q00403	316 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	SKP2	Q13309	424 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	MED21	Q13503	144 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	PYCR3	Q53H96	274 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	LDLRAD2	Q5SZI1	272 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	SDHAF4	Q5VUM1	108 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	NXNL2	Q5VZ03	156 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	SPNS3	Q6ZMD2	512 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	TCF24	Q7RTU0	167 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	LYZL2	Q7Z4W2	148 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	VN1R4	Q7Z5H5	301 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	KRTCAP2	Q8N6L1	136 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	FER1L6-AS1	Q8NA97	138 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	GATD1	Q8NB37	220 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001		Q8NDZ9	215 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	LFNG	Q8NES3	379 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	OR4P4	Q8NGL7	312 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	OR2K2	Q8NGT1	345 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	STOML3	Q8TAV4	291 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	CCDC12	Q8WUD4	166 aa	Predicted RBP	0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	KCTD4	Q8WVF5	259 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	ZNF514	Q96K75	400 aa	Predicted RBP	0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	OR2V2	Q96R30	315 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	LINC01587	Q99440	93 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	ANAPC13	Q9BS18	74 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	TAPBPL	Q9BX59	468 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	BBS2	Q9BXC9	721 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	ZNF436	Q9C0F3	470 aa	Predicted RBP	0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	OR2D2	Q9H210	308 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	IMP3	Q9NV31	184 aa	Known RBP	0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	TAS2R13	Q9NYV9	303 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	SCML1	Q9UN30	329 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	POMP	Q9Y244	141 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001		R4GN34	69 aa		0.93	□□□□□ -2.26
BBS4-215	ENST00000569001	ATAD5	Q96QE3	1844 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	TENM1	Q9UKZ4	2725 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001		A0A1B0GU33	70 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	OR5H14	A6NHG9	310 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	ZNF729	A6NN14	1252 aa	Predicted RBP	0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	EFCAB9	A8MZ26	197 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001		H3BP45	60 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	KLRC4-KLRK1	H3BQV0	150 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001		H3BSA7	217 aa		0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	CPSF4	O95639	269 aa	Known RBP	0.92	□□□□□ -2.26
BBS4-215	ENST00000569001	GPR75	O95800	540 aa		0.92	□□□□□ -2.26

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