RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 SVEP1Q4LDE5 3571 aa13.71□□□□□ -0.21
COMMD4-224ENST00000568877 XRCC3O43542 346 aa13.71□□□□□ -0.21
COMMD4-224ENST00000568877 ORC5O43913 435 aa13.71□□□□□ -0.21
COMMD4-224ENST00000568877 CLPXO76031 633 aa13.71□□□□□ -0.21
COMMD4-224ENST00000568877 FSHBP01225 129 aa13.71□□□□□ -0.21
COMMD4-224ENST00000568877 CD3GP09693 182 aa13.71□□□□□ -0.21
COMMD4-224ENST00000568877 IGHV1-8P0DP01 117 aa13.71□□□□□ -0.21
COMMD4-224ENST00000568877 RCC1P18754 421 aaPredicted RBP13.71□□□□□ -0.21
COMMD4-224ENST00000568877 ELK1P19419 428 aa13.71□□□□□ -0.21
COMMD4-224ENST00000568877 SSTR5P35346 364 aa13.71□□□□□ -0.21
COMMD4-224ENST00000568877 SRP14P37108 136 aaKnown RBP13.71□□□□□ -0.21
COMMD4-224ENST00000568877 DLX1P56177 255 aa13.71□□□□□ -0.21
COMMD4-224ENST00000568877 MRPS15P82914 257 aaKnown RBP13.71□□□□□ -0.21
COMMD4-224ENST00000568877 PRB3Q04118 309 aaPredicted RBP13.71□□□□□ -0.21
COMMD4-224ENST00000568877 KLF17Q5JT82 389 aaPredicted RBP13.71□□□□□ -0.21
COMMD4-224ENST00000568877 C6orf183Q5T699 404 aa13.71□□□□□ -0.21
COMMD4-224ENST00000568877 HEPN1Q6WQI6 88 aa13.71□□□□□ -0.21
COMMD4-224ENST00000568877 DTX3Q8N9I9 347 aa13.71□□□□□ -0.21
COMMD4-224ENST00000568877 TNFRSF14Q92956 283 aa13.71□□□□□ -0.21
COMMD4-224ENST00000568877 LHX4Q969G2 390 aa13.71□□□□□ -0.21
COMMD4-224ENST00000568877 LINC00574Q9H8X3 128 aa13.71□□□□□ -0.21
COMMD4-224ENST00000568877 TRBV6-6A0A0A6YYG2 114 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 TRAV40A0A0B4J280 105 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 A6NHS1 94 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 POM121CA8CG34 1229 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 C12orf77C9JDV5 145 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 NPIPB11E5RHQ5 1161 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 CTDSP2O14595 271 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 RGS5O15539 181 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 MMP23AO75900 390 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 IGHV4-38-2P0DP08 117 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 HOXB4P17483 251 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-224ENST00000568877 OMGP23515 440 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 ARFRP1Q13795 201 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 CHRFAM7AQ494W8 412 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 TMEM69Q5SWH9 247 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 PRAMEF5Q5TYX0 476 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 HACD4Q5VWC8 232 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 NCR3LG1Q68D85 454 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 ZNF880Q6PDB4 577 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 TRAT1Q6PIZ9 186 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 ZNF782Q6ZMW2 699 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-224ENST00000568877 Q6ZPA2 131 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 IZUMO1Q8IYV9 350 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 MCFD2Q8NI22 146 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 RFESDQ8TAC1 157 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 SETD6Q8TBK2 473 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 ARL11Q969Q4 196 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 NXF2Q9GZY0 626 aaKnown RBP13.7□□□□□ -0.22
COMMD4-224ENST00000568877 HEXA-AS1Q9H8Q6 139 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 IDI2-AS1Q9NZ38 188 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 KCNIP1Q9NZI2 227 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 ELF5Q9UKW6 265 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-224ENST00000568877 SESN1Q9Y6P5 492 aa13.7□□□□□ -0.22
COMMD4-224ENST00000568877 IGHV3OR16-10A0A075B7F0 116 aa13.69□□□□□ -0.22
COMMD4-224ENST00000568877 CENPVL3A0A0U1RRI6 287 aa13.69□□□□□ -0.22
COMMD4-224ENST00000568877 TMEM235A6NFC5 223 aa13.69□□□□□ -0.22
COMMD4-224ENST00000568877 FAM25AB3EWG3 89 aa13.69□□□□□ -0.22
COMMD4-224ENST00000568877 FAM25CB3EWG5 89 aa13.69□□□□□ -0.22
COMMD4-224ENST00000568877 FAM25GB3EWG6 89 aa13.69□□□□□ -0.22
COMMD4-224ENST00000568877 RNASEK-C17orf49H0YIS7 233 aa13.69□□□□□ -0.22
COMMD4-224ENST00000568877 C15orf65H3BRN8 121 aa13.69□□□□□ -0.22
COMMD4-224ENST00000568877 GDNFP39905 211 aa13.69□□□□□ -0.22
COMMD4-224ENST00000568877 KLRD1Q13241 179 aa13.69□□□□□ -0.22
COMMD4-224ENST00000568877 PNLIPRP3Q17RR3 467 aa13.69□□□□□ -0.22
COMMD4-224ENST00000568877 GPR157Q5UAW9 335 aa13.69□□□□□ -0.22
COMMD4-224ENST00000568877 HCP5Q6MZN7 132 aa13.69□□□□□ -0.22
COMMD4-224ENST00000568877 MOB1BQ7L9L4 216 aa13.69□□□□□ -0.22
COMMD4-224ENST00000568877 ZNF554Q86TJ5 538 aa13.69□□□□□ -0.22
COMMD4-224ENST00000568877 PDZD9Q8IXQ8 264 aa13.69□□□□□ -0.22
COMMD4-224ENST00000568877 OR10A7Q8NGE5 316 aa13.69□□□□□ -0.22
COMMD4-224ENST00000568877 MIXL1Q9H2W2 232 aa13.69□□□□□ -0.22
COMMD4-224ENST00000568877 TAF9BQ9HBM6 251 aa13.69□□□□□ -0.22
COMMD4-224ENST00000568877 RAB9BQ9NP90 201 aa13.69□□□□□ -0.22
COMMD4-224ENST00000568877 NUP50Q9UKX7 468 aa13.69□□□□□ -0.22
COMMD4-224ENST00000568877 IGHV1-69DA0A0B4J2H0 117 aa13.68□□□□□ -0.22
COMMD4-224ENST00000568877 SPINT2O43291 252 aa13.68□□□□□ -0.22
COMMD4-224ENST00000568877 CRLF1O75462 422 aa13.68□□□□□ -0.22
COMMD4-224ENST00000568877 IGHV1-69P01742 117 aa13.68□□□□□ -0.22
COMMD4-224ENST00000568877 MELTFP08582 738 aa13.68□□□□□ -0.22
COMMD4-224ENST00000568877 TALDO1P37837 337 aa13.68□□□□□ -0.22
COMMD4-224ENST00000568877 MNDAP41218 407 aa13.68□□□□□ -0.22
COMMD4-224ENST00000568877 UBE2E1P51965 193 aa13.68□□□□□ -0.22
COMMD4-224ENST00000568877 TAS2R20P59543 309 aa13.68□□□□□ -0.22
COMMD4-224ENST00000568877 GNG2P59768 71 aa13.68□□□□□ -0.22
COMMD4-224ENST00000568877 PITPNAQ00169 270 aa13.68□□□□□ -0.22
COMMD4-224ENST00000568877 GUCA2AQ02747 115 aa13.68□□□□□ -0.22
COMMD4-224ENST00000568877 HMGN3Q15651 99 aa13.68□□□□□ -0.22
COMMD4-224ENST00000568877 OR52W1Q6IF63 320 aa13.68□□□□□ -0.22
COMMD4-224ENST00000568877 LURAP1LQ8IV03 231 aa13.68□□□□□ -0.22
COMMD4-224ENST00000568877 LAX1Q8IWV1 398 aa13.68□□□□□ -0.22
COMMD4-224ENST00000568877 PRR18Q8N4B5 295 aa13.68□□□□□ -0.22
COMMD4-224ENST00000568877 OR13D1Q8NGV5 346 aa13.68□□□□□ -0.22
COMMD4-224ENST00000568877 UBALD1Q8TB05 177 aa13.68□□□□□ -0.22
COMMD4-224ENST00000568877 KIRREL1Q96J84 757 aa13.68□□□□□ -0.22
COMMD4-224ENST00000568877 C6orf62Q9GZU0 229 aaPredicted RBP13.68□□□□□ -0.22
COMMD4-224ENST00000568877 TMEM133Q9H2Q1 129 aa13.68□□□□□ -0.22
COMMD4-224ENST00000568877 AUNIPQ9H7T9 357 aa13.68□□□□□ -0.22
COMMD4-224ENST00000568877 Q9N2K0 584 aa13.68□□□□□ -0.22
COMMD4-224ENST00000568877 BATF3Q9NR55 127 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms