RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 GAL3ST2Q9H3Q3 398 aa12.91□□□□□ -0.34
SPG7-218ENST00000568205 MBNL3Q9NUK0 354 aaKnown RBP12.91□□□□□ -0.34
SPG7-218ENST00000568205 CALYQ9NYX4 217 aa12.91□□□□□ -0.34
SPG7-218ENST00000568205 MRPS7Q9Y2R9 242 aaKnown RBP12.91□□□□□ -0.34
SPG7-218ENST00000568205 AUP1Q9Y679 476 aa12.91□□□□□ -0.34
SPG7-218ENST00000568205 MTORP42345 2549 aa12.91□□□□□ -0.34
SPG7-218ENST00000568205 KBTBD11-OT1A0A1B0GTJ5 212 aa12.9□□□□□ -0.34
SPG7-218ENST00000568205 C17orf98A8MV24 154 aa12.9□□□□□ -0.34
SPG7-218ENST00000568205 A8MV72 311 aaPredicted RBP12.9□□□□□ -0.34
SPG7-218ENST00000568205 CLPXO76031 633 aa12.9□□□□□ -0.34
SPG7-218ENST00000568205 HLA-DQB1P01920 261 aa12.9□□□□□ -0.34
SPG7-218ENST00000568205 RBP4P02753 201 aa12.9□□□□□ -0.34
SPG7-218ENST00000568205 PTHLHP12272 177 aa12.9□□□□□ -0.34
SPG7-218ENST00000568205 MMP9P14780 707 aa12.9□□□□□ -0.34
SPG7-218ENST00000568205 GZMHP20718 246 aa12.9□□□□□ -0.34
SPG7-218ENST00000568205 TNFSF8P32971 234 aa12.9□□□□□ -0.34
SPG7-218ENST00000568205 S100A5P33763 92 aa12.9□□□□□ -0.34
SPG7-218ENST00000568205 PITPNAQ00169 270 aa12.9□□□□□ -0.34
SPG7-218ENST00000568205 MADCAM1Q13477 382 aa12.9□□□□□ -0.34
SPG7-218ENST00000568205 C17orf58Q2M2W7 97 aa12.9□□□□□ -0.34
SPG7-218ENST00000568205 TRAT1Q6PIZ9 186 aa12.9□□□□□ -0.34
SPG7-218ENST00000568205 Q6ZPA2 131 aa12.9□□□□□ -0.34
SPG7-218ENST00000568205 C11orf42Q8N5U0 333 aa12.9□□□□□ -0.34
SPG7-218ENST00000568205 Q8N7P7 452 aa12.9□□□□□ -0.34
SPG7-218ENST00000568205 SETD6Q8TBK2 473 aa12.9□□□□□ -0.34
SPG7-218ENST00000568205 OPN4Q9UHM6 478 aa12.9□□□□□ -0.34
SPG7-218ENST00000568205 ARHGAP32A7KAX9 2087 aa12.9□□□□□ -0.34
SPG7-218ENST00000568205 hCG_1809904A0A1W2PP81 198 aa12.89□□□□□ -0.35
SPG7-218ENST00000568205 A0A1W2PPE2 198 aa12.89□□□□□ -0.35
SPG7-218ENST00000568205 A0A1W2PR64 198 aa12.89□□□□□ -0.35
SPG7-218ENST00000568205 A0A1W2PRV1 198 aa12.89□□□□□ -0.35
SPG7-218ENST00000568205 C12orf77C9JDV5 145 aa12.89□□□□□ -0.35
SPG7-218ENST00000568205 ORC5O43913 435 aa12.89□□□□□ -0.35
SPG7-218ENST00000568205 SSX5O60225 188 aa12.89□□□□□ -0.35
SPG7-218ENST00000568205 TPPPO94811 219 aa12.89□□□□□ -0.35
SPG7-218ENST00000568205 TOX4O94842 621 aa12.89□□□□□ -0.35
SPG7-218ENST00000568205 FCGR3AP08637 254 aa12.89□□□□□ -0.35
SPG7-218ENST00000568205 SSTR5P35346 364 aa12.89□□□□□ -0.35
SPG7-218ENST00000568205 PRAMEF5Q5TYX0 476 aa12.89□□□□□ -0.35
SPG7-218ENST00000568205 BAIAP2L2Q6UXY1 529 aa12.89□□□□□ -0.35
SPG7-218ENST00000568205 ZNF554Q86TJ5 538 aa12.89□□□□□ -0.35
SPG7-218ENST00000568205 SNX29P2Q8IUI4 249 aa12.89□□□□□ -0.35
SPG7-218ENST00000568205 OR6Q1Q8NGQ2 317 aa12.89□□□□□ -0.35
SPG7-218ENST00000568205 ARL11Q969Q4 196 aa12.89□□□□□ -0.35
SPG7-218ENST00000568205 TBX15Q96SF7 602 aa12.89□□□□□ -0.35
SPG7-218ENST00000568205 PCGF1Q9BSM1 259 aa12.89□□□□□ -0.35
SPG7-218ENST00000568205 GSX1Q9H4S2 264 aaPredicted RBP12.89□□□□□ -0.35
SPG7-218ENST00000568205 METTL8Q9H825 291 aaKnown RBP12.89□□□□□ -0.35
SPG7-218ENST00000568205 LINC00574Q9H8X3 128 aa12.89□□□□□ -0.35
SPG7-218ENST00000568205 TAF9BQ9HBM6 251 aa12.89□□□□□ -0.35
SPG7-218ENST00000568205 Q9N2K0 584 aa12.89□□□□□ -0.35
SPG7-218ENST00000568205 PTTG2Q9NZH5 202 aa12.89□□□□□ -0.35
SPG7-218ENST00000568205 KCNIP1Q9NZI2 227 aa12.89□□□□□ -0.35
SPG7-218ENST00000568205 NPIPB11E5RHQ5 1161 aa12.88□□□□□ -0.35
SPG7-218ENST00000568205 C15orf65H3BRN8 121 aa12.88□□□□□ -0.35
SPG7-218ENST00000568205 AVPP01185 164 aa12.88□□□□□ -0.35
SPG7-218ENST00000568205 DTYMKP23919 212 aa12.88□□□□□ -0.35
SPG7-218ENST00000568205 PRTN3P24158 256 aa12.88□□□□□ -0.35
SPG7-218ENST00000568205 PRSS3P35030 304 aa12.88□□□□□ -0.35
SPG7-218ENST00000568205 ERVFRD-1P60508 538 aa12.88□□□□□ -0.35
SPG7-218ENST00000568205 HEPN1Q6WQI6 88 aa12.88□□□□□ -0.35
SPG7-218ENST00000568205 VMO1Q7Z5L0 202 aa12.88□□□□□ -0.35
SPG7-218ENST00000568205 RFESDQ8TAC1 157 aa12.88□□□□□ -0.35
SPG7-218ENST00000568205 UBALD1Q8TB05 177 aa12.88□□□□□ -0.35
SPG7-218ENST00000568205 C15orf40Q8WUR7 153 aa12.88□□□□□ -0.35
SPG7-218ENST00000568205 GCDHQ92947 438 aaPredicted RBP12.88□□□□□ -0.35
SPG7-218ENST00000568205 UPRTQ96BW1 309 aa12.88□□□□□ -0.35
SPG7-218ENST00000568205 UNKLQ9H9P5 680 aaKnown RBP12.88□□□□□ -0.35
SPG7-218ENST00000568205 SIRT7Q9NRC8 400 aa12.88□□□□□ -0.35
SPG7-218ENST00000568205 ZNF230Q9UIE0 474 aaPredicted RBP12.88□□□□□ -0.35
SPG7-218ENST00000568205 MGAT4AQ9UM21 535 aa12.88□□□□□ -0.35
SPG7-218ENST00000568205 SESN1Q9Y6P5 492 aa12.88□□□□□ -0.35
SPG7-218ENST00000568205 YLPM1P49750 1951 aaKnown RBP12.88□□□□□ -0.35
SPG7-218ENST00000568205 WNK2Q9Y3S1 2297 aa12.88□□□□□ -0.35
SPG7-218ENST00000568205 HIVEP2P31629 2446 aa12.88□□□□□ -0.35
SPG7-218ENST00000568205 SONP18583 2426 aaKnown RBP12.87□□□□□ -0.35
SPG7-218ENST00000568205 SPINT2O43291 252 aa12.87□□□□□ -0.35
SPG7-218ENST00000568205 MMP23AO75900 390 aa12.87□□□□□ -0.35
SPG7-218ENST00000568205 HBZP02008 142 aa12.87□□□□□ -0.35
SPG7-218ENST00000568205 IGHV1-8P0DP01 117 aa12.87□□□□□ -0.35
SPG7-218ENST00000568205 OMGP23515 440 aa12.87□□□□□ -0.35
SPG7-218ENST00000568205 GDNFP39905 211 aa12.87□□□□□ -0.35
SPG7-218ENST00000568205 HLA-DRB3P79483 266 aa12.87□□□□□ -0.35
SPG7-218ENST00000568205 GUCA2AQ02747 115 aa12.87□□□□□ -0.35
SPG7-218ENST00000568205 HMGN3Q15651 99 aa12.87□□□□□ -0.35
SPG7-218ENST00000568205 ZNF782Q6ZMW2 699 aaPredicted RBP12.87□□□□□ -0.35
SPG7-218ENST00000568205 C1orf229Q6ZS94 237 aaPredicted RBP12.87□□□□□ -0.35
SPG7-218ENST00000568205 CCDC190Q86UF4 302 aa12.87□□□□□ -0.35
SPG7-218ENST00000568205 OR1L1Q8NH94 360 aa12.87□□□□□ -0.35
SPG7-218ENST00000568205 MAFIPQ8WZ33 124 aa12.87□□□□□ -0.35
SPG7-218ENST00000568205 ABHD1Q96SE0 405 aa12.87□□□□□ -0.35
SPG7-218ENST00000568205 SCPEP1Q9HB40 452 aa12.87□□□□□ -0.35
SPG7-218ENST00000568205 RAB9BQ9NP90 201 aa12.87□□□□□ -0.35
SPG7-218ENST00000568205 IDI2-AS1Q9NZ38 188 aa12.87□□□□□ -0.35
SPG7-218ENST00000568205 RABL2AQ9UBK7 228 aaPredicted RBP12.87□□□□□ -0.35
SPG7-218ENST00000568205 RABL2BQ9UNT1 228 aa12.87□□□□□ -0.35
SPG7-218ENST00000568205 DOCK11Q5JSL3 2073 aa12.87□□□□□ -0.35
SPG7-218ENST00000568205 TRDCB7Z8K6 153 aa12.86□□□□□ -0.35
SPG7-218ENST00000568205 CBX5P45973 191 aa12.86□□□□□ -0.35
SPG7-218ENST00000568205 DLX1P56177 255 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms