RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 RSBN1Q5VWQ0 802 aaPredicted RBP12.86□□□□□ -0.35
CDH3-205ENST00000566808 OR5D18Q8NGL1 313 aa12.86□□□□□ -0.35
CDH3-205ENST00000566808 ADAT3Q96EY9 351 aaPredicted RBP12.86□□□□□ -0.35
CDH3-205ENST00000566808 LRGUKQ96M69 825 aa12.86□□□□□ -0.35
CDH3-205ENST00000566808 ADGRL4Q9HBW9 690 aa12.86□□□□□ -0.35
CDH3-205ENST00000566808 NEK6Q9HC98 313 aa12.86□□□□□ -0.35
CDH3-205ENST00000566808 H0Y980 276 aa12.85□□□□□ -0.35
CDH3-205ENST00000566808 HSPB1P04792 205 aaKnown RBP12.85□□□□□ -0.35
CDH3-205ENST00000566808 OCM2P0CE71 109 aa12.85□□□□□ -0.35
CDH3-205ENST00000566808 OCMP0CE72 109 aaPredicted RBP12.85□□□□□ -0.35
CDH3-205ENST00000566808 KCNJ3P48549 501 aa12.85□□□□□ -0.35
CDH3-205ENST00000566808 ZNF137PP52743 207 aa12.85□□□□□ -0.35
CDH3-205ENST00000566808 SPATS1Q496A3 300 aa12.85□□□□□ -0.35
CDH3-205ENST00000566808 OR52M1Q8NGK5 317 aa12.85□□□□□ -0.35
CDH3-205ENST00000566808 THAP7Q9BT49 309 aaPredicted RBP12.85□□□□□ -0.35
CDH3-205ENST00000566808 IGHV7-81A0A0B4J1V7 117 aa12.84□□□□□ -0.35
CDH3-205ENST00000566808 TRAV24A0A0B4J272 114 aa12.84□□□□□ -0.35
CDH3-205ENST00000566808 TCRBV5S2A0A599 114 aa12.84□□□□□ -0.35
CDH3-205ENST00000566808 ZNF20P17024 532 aa12.84□□□□□ -0.35
CDH3-205ENST00000566808 BLVRBP30043 206 aaPredicted RBP12.84□□□□□ -0.35
CDH3-205ENST00000566808 C19orf54Q5BKX5 351 aa12.84□□□□□ -0.35
CDH3-205ENST00000566808 TMEM236Q5W0B7 351 aa12.84□□□□□ -0.35
CDH3-205ENST00000566808 SPACA5Q96QH8 159 aa12.84□□□□□ -0.35
CDH3-205ENST00000566808 ST6GALNAC5Q9BVH7 336 aa12.84□□□□□ -0.35
CDH3-205ENST00000566808 ZNF556Q9HAH1 456 aa12.84□□□□□ -0.35
CDH3-205ENST00000566808 FAM118AQ9NWS6 357 aa12.84□□□□□ -0.35
CDH3-205ENST00000566808 TVP23BQ9NYZ1 205 aa12.84□□□□□ -0.35
CDH3-205ENST00000566808 FOXA2Q9Y261 457 aaPredicted RBP12.84□□□□□ -0.35
CDH3-205ENST00000566808 A0A1W2PN81 502 aa12.83□□□□□ -0.36
CDH3-205ENST00000566808 SDCBPO00560 298 aaPredicted RBP12.83□□□□□ -0.36
CDH3-205ENST00000566808 SOX15O60248 233 aa12.83□□□□□ -0.36
CDH3-205ENST00000566808 RGS11O94810 467 aa12.83□□□□□ -0.36
CDH3-205ENST00000566808 CHRNA7P36544 502 aa12.83□□□□□ -0.36
CDH3-205ENST00000566808 ECSCRQ19T08 205 aa12.83□□□□□ -0.36
CDH3-205ENST00000566808 FAM98BQ52LJ0 330 aaKnown RBP12.83□□□□□ -0.36
CDH3-205ENST00000566808 LINC00322Q6ZN03 302 aaPredicted RBP12.83□□□□□ -0.36
CDH3-205ENST00000566808 SSX6Q7RTT6 188 aa12.83□□□□□ -0.36
CDH3-205ENST00000566808 RPP25LQ8N5L8 163 aaKnown RBP12.83□□□□□ -0.36
CDH3-205ENST00000566808 TCTEX1D1Q8N7M0 179 aa12.83□□□□□ -0.36
CDH3-205ENST00000566808 PLPPR1Q8TBJ4 325 aa12.83□□□□□ -0.36
CDH3-205ENST00000566808 TMEM106AQ96A25 262 aa12.83□□□□□ -0.36
CDH3-205ENST00000566808 CST11Q9H112 138 aa12.83□□□□□ -0.36
CDH3-205ENST00000566808 SHISA3A0PJX4 238 aa12.82□□□□□ -0.36
CDH3-205ENST00000566808 NUPR2A6NF83 97 aa12.82□□□□□ -0.36
CDH3-205ENST00000566808 MT-ND2P03891 347 aa12.82□□□□□ -0.36
CDH3-205ENST00000566808 DBTP11182 482 aaKnown RBP12.82□□□□□ -0.36
CDH3-205ENST00000566808 MNAT1P51948 309 aa12.82□□□□□ -0.36
CDH3-205ENST00000566808 CRIP2P52943 208 aaPredicted RBP12.82□□□□□ -0.36
CDH3-205ENST00000566808 RAB40BQ12829 278 aa12.82□□□□□ -0.36
CDH3-205ENST00000566808 LSAMPQ13449 338 aa12.82□□□□□ -0.36
CDH3-205ENST00000566808 Q3ZCU0 254 aa12.82□□□□□ -0.36
CDH3-205ENST00000566808 PYHIN1Q6K0P9 492 aa12.82□□□□□ -0.36
CDH3-205ENST00000566808 FAHD1Q6P587 224 aa12.82□□□□□ -0.36
CDH3-205ENST00000566808 RDH10Q8IZV5 341 aa12.82□□□□□ -0.36
CDH3-205ENST00000566808 PRSS35Q8N3Z0 413 aa12.82□□□□□ -0.36
CDH3-205ENST00000566808 CNIH3Q8TBE1 160 aa12.82□□□□□ -0.36
CDH3-205ENST00000566808 GFOD1Q9NXC2 390 aa12.82□□□□□ -0.36
CDH3-205ENST00000566808 ERGIC3Q9Y282 383 aa12.82□□□□□ -0.36
CDH3-205ENST00000566808 TRAV39A0A0B4J263 110 aa12.81□□□□□ -0.36
CDH3-205ENST00000566808 IGHV3-11P01762 117 aa12.81□□□□□ -0.36
CDH3-205ENST00000566808 GZMHP20718 246 aa12.81□□□□□ -0.36
CDH3-205ENST00000566808 VHLP40337 213 aa12.81□□□□□ -0.36
CDH3-205ENST00000566808 LCN12Q6JVE5 192 aa12.81□□□□□ -0.36
CDH3-205ENST00000566808 SLC25A48Q6ZT89 311 aaKnown RBP12.81□□□□□ -0.36
CDH3-205ENST00000566808 CASTOR1Q8WTX7 329 aa12.81□□□□□ -0.36
CDH3-205ENST00000566808 FGGYQ96C11 551 aa12.81□□□□□ -0.36
CDH3-205ENST00000566808 NABP2Q9BQ15 211 aa12.81□□□□□ -0.36
CDH3-205ENST00000566808 CXorf65A6NEN9 183 aa12.8□□□□□ -0.36
CDH3-205ENST00000566808 METTL15A6NJ78 407 aa12.8□□□□□ -0.36
CDH3-205ENST00000566808 C15orf65H3BRN8 121 aa12.8□□□□□ -0.36
CDH3-205ENST00000566808 SULT1C4O75897 302 aa12.8□□□□□ -0.36
CDH3-205ENST00000566808 BRI3O95415 125 aa12.8□□□□□ -0.36
CDH3-205ENST00000566808 ZP3P21754 424 aa12.8□□□□□ -0.36
CDH3-205ENST00000566808 ACTBP60709 375 aa12.8□□□□□ -0.36
CDH3-205ENST00000566808 NDPQ00604 133 aa12.8□□□□□ -0.36
CDH3-205ENST00000566808 IL13RA2Q14627 380 aa12.8□□□□□ -0.36
CDH3-205ENST00000566808 C5orf64Q2M2E5 130 aa12.8□□□□□ -0.36
CDH3-205ENST00000566808 ANKRD60Q9BZ19 345 aa12.8□□□□□ -0.36
CDH3-205ENST00000566808 PRRG3Q9BZD7 231 aa12.8□□□□□ -0.36
CDH3-205ENST00000566808 MYRFQ9Y2G1 1151 aa12.8□□□□□ -0.36
CDH3-205ENST00000566808 NBR2O15453 112 aa12.79□□□□□ -0.36
CDH3-205ENST00000566808 PRKYO43930 277 aa12.79□□□□□ -0.36
CDH3-205ENST00000566808 CST1P01037 141 aa12.79□□□□□ -0.36
CDH3-205ENST00000566808 CSTBP04080 98 aaKnown RBP12.79□□□□□ -0.36
CDH3-205ENST00000566808 TMEM225BP0DP42 221 aa12.79□□□□□ -0.36
CDH3-205ENST00000566808 FSTP19883 344 aa12.79□□□□□ -0.36
CDH3-205ENST00000566808 TMEM244Q5VVB8 128 aa12.79□□□□□ -0.36
CDH3-205ENST00000566808 ELP2Q6IA86 826 aa12.79□□□□□ -0.36
CDH3-205ENST00000566808 Q8N402 240 aa12.79□□□□□ -0.36
CDH3-205ENST00000566808 OR13C9Q8NGT0 318 aa12.79□□□□□ -0.36
CDH3-205ENST00000566808 ARL11Q969Q4 196 aa12.79□□□□□ -0.36
CDH3-205ENST00000566808 UTP4Q969X6 686 aaKnown RBP12.79□□□□□ -0.36
CDH3-205ENST00000566808 NR1H4Q96RI1 486 aaPredicted RBP12.79□□□□□ -0.36
CDH3-205ENST00000566808 TBX5Q99593 518 aa12.79□□□□□ -0.36
CDH3-205ENST00000566808 ZNF251Q9BRH9 671 aa12.79□□□□□ -0.36
CDH3-205ENST00000566808 PLEKHA3Q9HB20 300 aa12.79□□□□□ -0.36
CDH3-205ENST00000566808 FBXO7Q9Y3I1 522 aa12.79□□□□□ -0.36
CDH3-205ENST00000566808 IGHV3-43A0A0B4J1X8 118 aa12.78□□□□□ -0.36
CDH3-205ENST00000566808 SLC31A2O15432 143 aa12.78□□□□□ -0.36
CDH3-205ENST00000566808 LANCL1O43813 399 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms