RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 PRSS22Q9GZN4 317 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 BANF2Q9H503 90 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 SEBOXQ9HB31 216 aaPredicted RBP8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 IDI2-AS1Q9NZ38 188 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 CNOT2Q9NZN8 540 aaKnown RBP8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 DPM3Q9P2X0 92 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 PSORS1C1Q9UIG5 152 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 ERGIC3Q9Y282 383 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 HSPE1-MOB4S4R3N1 261 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 IGHV3-43A0A0B4J1X8 118 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 KBTBD11-OT1A0A1B0GTJ5 212 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 TMEM30CPA0ZSE6 113 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 H3BUI4 141 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 CASQ2O14958 399 aaPredicted RBP8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 CRTAPO75718 401 aaPredicted RBP8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 IL1AP01583 271 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 IGHV3-43DP0DP04 118 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 GTF2F2P13984 249 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 MNDAP41218 407 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 ECI1P42126 302 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 KIR2DS4P43632 304 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 BLCAPP62952 87 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 BDH1Q02338 343 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 DOC2BQ14184 412 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 HES1Q14469 280 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 INSL4Q14641 139 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 MED22Q15528 200 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 C17orf58Q2M2W7 97 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 NKAPLQ5M9Q1 402 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 RBM48Q5RL73 367 aaKnown RBP8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 TPTE2P1Q5T6R2 138 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 RTN4RL2Q86UN3 420 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 ZNF565Q8N9K5 539 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 OR10X1Q8NGY0 326 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 SGCDQ92629 289 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 DERL3Q96Q80 235 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 SLC25A33Q9BSK2 321 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 MND1Q9BWT6 205 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 CCDC90BQ9GZT6 254 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 DCLRE1BQ9H816 532 aa8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 PAK1IP1Q9NWT1 392 aaPredicted RBP8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 AMMECR1Q9Y4X0 333 aaPredicted RBP8.12□□□□□ -1.11
GTF3C1-206ENST00000566779 NOTCH1P46531 2555 aa8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 SHISA3A0PJX4 238 aa8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 BUB1B-PAK6H3BSN5 160 aa8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 AIPO00170 330 aa8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 SDCBPO00560 298 aaPredicted RBP8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 ALDOBP05062 364 aa8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 HSMCR30P0CW71 290 aa8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 CD28P10747 220 aa8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 IGFBP3P17936 291 aaPredicted RBP8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 FSTP19883 344 aa8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 MAPK3P27361 379 aaPredicted RBP8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 VHLP40337 213 aa8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 REG1BP48304 166 aa8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 RPS11P62280 158 aaKnown RBP eCLIP8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 HNF4GQ14541 408 aa8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 ABCA11PQ4W5N1 156 aa8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 FBLN7Q53RD9 439 aa8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 FAM27D1Q5T7N8 215 aa8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 OR56B4Q8NH76 319 aa8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 OR9G1Q8NH87 305 aa8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 TFAP2CQ92754 450 aa8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 CORO2AQ92828 525 aa8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 MYDGFQ969H8 173 aa8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 AKR1E2Q96JD6 320 aa8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 SSBP4Q9BWG4 385 aaPredicted RBP8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 SELENOIQ9C0D9 397 aa8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 MMP28Q9H239 520 aa8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 PCDHB16Q9NRJ7 776 aa8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 SCN3BQ9NY72 215 aa8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 IL36GQ9NZH8 169 aa8.11□□□□□ -1.11
GTF3C1-206ENST00000566779 TRBV5-7A0A0A0MS05 114 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 UBE2QL1A1L167 161 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 H0YHG0 523 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 ZNF780AO75290 641 aaPredicted RBP8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 MPIG6BO95866 241 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 IGLV1-47P01700 117 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 CDK1P06493 297 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 LPLP06858 475 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 SNRNP70P08621 437 aaKnown RBP8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 MGMTP16455 207 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 ADMP35318 185 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 GPR50Q13585 617 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 DIAPH2-AS1Q14236 149 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 MPV17LQ2QL34 196 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 RAB12Q6IQ22 244 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 FAM53AQ6NSI3 398 aaPredicted RBP8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 CCDC144NLQ6NUI1 221 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 C11orf88Q6PI97 169 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 DRAM1Q8N682 238 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 NANOGP1Q8N7R0 232 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 ZNF485Q8NCK3 441 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 OR10V1Q8NGI7 309 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 OR4K15Q8NH41 348 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 NRG4Q8WWG1 115 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 ARL11Q969Q4 196 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 TMEM203Q969S6 136 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 CREB3L1Q96BA8 519 aa8.1□□□□□ -1.11
GTF3C1-206ENST00000566779 CYYR1Q96J86 154 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms