RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 TRAT1Q6PIZ9 186 aa12.22□□□□□ -0.45
SPG7-213ENST00000566221 TRAPPC6BQ86SZ2 158 aa12.22□□□□□ -0.45
SPG7-213ENST00000566221 SNX29P2Q8IUI4 249 aa12.22□□□□□ -0.45
SPG7-213ENST00000566221 SETD6Q8TBK2 473 aa12.22□□□□□ -0.45
SPG7-213ENST00000566221 SMIM4Q8WVI0 70 aa12.22□□□□□ -0.45
SPG7-213ENST00000566221 NUDCD2Q8WVJ2 157 aa12.22□□□□□ -0.45
SPG7-213ENST00000566221 DEDD2Q8WXF8 326 aa12.22□□□□□ -0.45
SPG7-213ENST00000566221 HDHD3Q9BSH5 251 aaPredicted RBP12.22□□□□□ -0.45
SPG7-213ENST00000566221 THAP7Q9BT49 309 aaPredicted RBP12.22□□□□□ -0.45
SPG7-213ENST00000566221 LPAR2Q9HBW0 351 aa12.22□□□□□ -0.45
SPG7-213ENST00000566221 TRAPPC2LQ9UL33 140 aa12.22□□□□□ -0.45
SPG7-213ENST00000566221 TRAV20A0A0B4J274 112 aa12.21□□□□□ -0.45
SPG7-213ENST00000566221 SMAD7O15105 426 aaKnown RBP12.21□□□□□ -0.45
SPG7-213ENST00000566221 PPIAL4GP0DN37 164 aa12.21□□□□□ -0.45
SPG7-213ENST00000566221 IL7P13232 177 aa12.21□□□□□ -0.45
SPG7-213ENST00000566221 DTYMKP23919 212 aa12.21□□□□□ -0.45
SPG7-213ENST00000566221 PAX2Q02962 417 aa12.21□□□□□ -0.45
SPG7-213ENST00000566221 MADCAM1Q13477 382 aa12.21□□□□□ -0.45
SPG7-213ENST00000566221 C6orf183Q5T699 404 aa12.21□□□□□ -0.45
SPG7-213ENST00000566221 TRIQKQ629K1 86 aa12.21□□□□□ -0.45
SPG7-213ENST00000566221 BTNL3Q6UXE8 466 aa12.21□□□□□ -0.45
SPG7-213ENST00000566221 CIARTQ8N365 385 aaPredicted RBP12.21□□□□□ -0.45
SPG7-213ENST00000566221 LY6G5BQ8NDX9 201 aa12.21□□□□□ -0.45
SPG7-213ENST00000566221 OR4K15Q8NH41 348 aa12.21□□□□□ -0.45
SPG7-213ENST00000566221 CORO2AQ92828 525 aa12.21□□□□□ -0.45
SPG7-213ENST00000566221 DACT3Q96B18 629 aaPredicted RBP12.21□□□□□ -0.45
SPG7-213ENST00000566221 TAS2R8Q9NYW2 309 aa12.21□□□□□ -0.45
SPG7-213ENST00000566221 ZNF107Q9UII5 783 aaPredicted RBP12.21□□□□□ -0.45
SPG7-213ENST00000566221 ELF5Q9UKW6 265 aaPredicted RBP12.21□□□□□ -0.45
SPG7-213ENST00000566221 MGAT4AQ9UM21 535 aa12.21□□□□□ -0.45
SPG7-213ENST00000566221 UBE2J1Q9Y385 318 aaPredicted RBP12.21□□□□□ -0.45
SPG7-213ENST00000566221 FCGR3AP08637 254 aa12.2□□□□□ -0.46
SPG7-213ENST00000566221 GSTT2BP0CG30 244 aa12.2□□□□□ -0.46
SPG7-213ENST00000566221 PTHLHP12272 177 aa12.2□□□□□ -0.46
SPG7-213ENST00000566221 CBX5P45973 191 aa12.2□□□□□ -0.46
SPG7-213ENST00000566221 INPP1P49441 399 aa12.2□□□□□ -0.46
SPG7-213ENST00000566221 AP3S2P59780 193 aa12.2□□□□□ -0.46
SPG7-213ENST00000566221 ZNF273Q14593 569 aa12.2□□□□□ -0.46
SPG7-213ENST00000566221 TMEM200BQ69YZ2 307 aa12.2□□□□□ -0.46
SPG7-213ENST00000566221 ZNF880Q6PDB4 577 aa12.2□□□□□ -0.46
SPG7-213ENST00000566221 TCF23Q7RTU1 214 aa12.2□□□□□ -0.46
SPG7-213ENST00000566221 ZNF554Q86TJ5 538 aa12.2□□□□□ -0.46
SPG7-213ENST00000566221 GLCCI1Q86VQ1 547 aa12.2□□□□□ -0.46
SPG7-213ENST00000566221 KIR3DL3Q8N743 410 aa12.2□□□□□ -0.46
SPG7-213ENST00000566221 ZNF565Q8N9K5 539 aa12.2□□□□□ -0.46
SPG7-213ENST00000566221 OR13A1Q8NGR1 328 aa12.2□□□□□ -0.46
SPG7-213ENST00000566221 MRGPRDQ8TDS7 321 aa12.2□□□□□ -0.46
SPG7-213ENST00000566221 MSI2Q96DH6 328 aaKnown RBP12.2□□□□□ -0.46
SPG7-213ENST00000566221 ZNF714Q96N38 554 aa12.2□□□□□ -0.46
SPG7-213ENST00000566221 GAL3ST2Q9H3Q3 398 aa12.2□□□□□ -0.46
SPG7-213ENST00000566221 ABCB10Q9NRK6 738 aa12.2□□□□□ -0.46
SPG7-213ENST00000566221 MBNL3Q9NUK0 354 aaKnown RBP12.2□□□□□ -0.46
SPG7-213ENST00000566221 TAS2R3Q9NYW6 316 aa12.2□□□□□ -0.46
SPG7-213ENST00000566221 RBMX2Q9Y388 322 aaKnown RBP12.2□□□□□ -0.46
SPG7-213ENST00000566221 CSPG4Q6UVK1 2322 aa12.2□□□□□ -0.46
SPG7-213ENST00000566221 ZNF729A6NN14 1252 aaPredicted RBP12.19□□□□□ -0.46
SPG7-213ENST00000566221 SSX5O60225 188 aa12.19□□□□□ -0.46
SPG7-213ENST00000566221 RBBP9O75884 186 aa12.19□□□□□ -0.46
SPG7-213ENST00000566221 LPLP06858 475 aa12.19□□□□□ -0.46
SPG7-213ENST00000566221 ZNF16P17020 682 aaPredicted RBP12.19□□□□□ -0.46
SPG7-213ENST00000566221 GATA3P23771 443 aa12.19□□□□□ -0.46
SPG7-213ENST00000566221 DVL1P1P54792 670 aaPredicted RBP12.19□□□□□ -0.46
SPG7-213ENST00000566221 GUCA2AQ02747 115 aa12.19□□□□□ -0.46
SPG7-213ENST00000566221 BAK1Q16611 211 aa12.19□□□□□ -0.46
SPG7-213ENST00000566221 CYB5R2Q6BCY4 276 aa12.19□□□□□ -0.46
SPG7-213ENST00000566221 LYSMD2Q8IV50 215 aa12.19□□□□□ -0.46
SPG7-213ENST00000566221 CCDC107Q8WV48 283 aa12.19□□□□□ -0.46
SPG7-213ENST00000566221 GCDHQ92947 438 aaPredicted RBP12.19□□□□□ -0.46
SPG7-213ENST00000566221 TMEM186Q96B77 213 aa12.19□□□□□ -0.46
SPG7-213ENST00000566221 C18orf12Q96KH6 178 aa12.19□□□□□ -0.46
SPG7-213ENST00000566221 Q9N2K0 584 aa12.19□□□□□ -0.46
SPG7-213ENST00000566221 RAB9BQ9NP90 201 aa12.19□□□□□ -0.46
SPG7-213ENST00000566221 KCNIP1Q9NZI2 227 aa12.19□□□□□ -0.46
SPG7-213ENST00000566221 ONECUT1Q9UBC0 465 aa12.19□□□□□ -0.46
SPG7-213ENST00000566221 OPN4Q9UHM6 478 aa12.19□□□□□ -0.46
SPG7-213ENST00000566221 TRAV39A0A0B4J263 110 aa12.18□□□□□ -0.46
SPG7-213ENST00000566221 KIR2DS1A0A191URI9 304 aa12.18□□□□□ -0.46
SPG7-213ENST00000566221 MEX3AA1L020 520 aaKnown RBP12.18□□□□□ -0.46
SPG7-213ENST00000566221 M0R1W7 72 aa12.18□□□□□ -0.46
SPG7-213ENST00000566221 ORC5O43913 435 aa12.18□□□□□ -0.46
SPG7-213ENST00000566221 RBP4P02753 201 aa12.18□□□□□ -0.46
SPG7-213ENST00000566221 ZNF728P0DKX0 622 aa12.18□□□□□ -0.46
SPG7-213ENST00000566221 RCC1P18754 421 aaPredicted RBP12.18□□□□□ -0.46
SPG7-213ENST00000566221 GZMHP20718 246 aa12.18□□□□□ -0.46
SPG7-213ENST00000566221 ACTBP60709 375 aa12.18□□□□□ -0.46
SPG7-213ENST00000566221 ACTG1P63261 375 aa12.18□□□□□ -0.46
SPG7-213ENST00000566221 SRSF7Q16629 238 aaKnown RBP eCLIP12.18□□□□□ -0.469e-7■□□□□ 10.6
SPG7-213ENST00000566221 RGS21Q2M5E4 152 aa12.18□□□□□ -0.46
SPG7-213ENST00000566221 CR1LQ2VPA4 569 aa12.18□□□□□ -0.46
SPG7-213ENST00000566221 DCAF12L2Q5VW00 463 aa12.18□□□□□ -0.46
SPG7-213ENST00000566221 STEAP3Q658P3 488 aa12.18□□□□□ -0.46
SPG7-213ENST00000566221 Q6ZPA2 131 aa12.18□□□□□ -0.46
SPG7-213ENST00000566221 Q6ZS49 121 aa12.18□□□□□ -0.46
SPG7-213ENST00000566221 MINDY2Q8NBR6 621 aa12.18□□□□□ -0.46
SPG7-213ENST00000566221 GPX8Q8TED1 209 aa12.18□□□□□ -0.46
SPG7-213ENST00000566221 OCSTAMPQ9BR26 566 aa12.18□□□□□ -0.46
SPG7-213ENST00000566221 C7orf50Q9BRJ6 194 aaKnown RBP12.18□□□□□ -0.46
SPG7-213ENST00000566221 ZNF286AQ9HBT8 521 aa12.18□□□□□ -0.46
SPG7-213ENST00000566221 IFT46Q9NQC8 304 aa12.18□□□□□ -0.46
SPG7-213ENST00000566221 MMP26Q9NRE1 261 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms