RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 RFESDQ8TAC1 157 aa10.98□□□□□ -0.65
VPS9D1-204ENST00000565023 FAM110DQ8TAY7 271 aaPredicted RBP10.98□□□□□ -0.65
VPS9D1-204ENST00000565023 MRGPRDQ8TDS7 321 aa10.98□□□□□ -0.65
VPS9D1-204ENST00000565023 NEK7Q8TDX7 302 aa10.98□□□□□ -0.65
VPS9D1-204ENST00000565023 CORO2AQ92828 525 aa10.98□□□□□ -0.65
VPS9D1-204ENST00000565023 LEAP2Q969E1 77 aa10.98□□□□□ -0.65
VPS9D1-204ENST00000565023 OR6C3Q9NZP0 311 aa10.98□□□□□ -0.65
VPS9D1-204ENST00000565023 FBLN5Q9UBX5 448 aa10.98□□□□□ -0.65
VPS9D1-204ENST00000565023 STUB1Q9UNE7 303 aa10.98□□□□□ -0.65
VPS9D1-204ENST00000565023 AK6Q9Y3D8 172 aaKnown RBP10.98□□□□□ -0.65
VPS9D1-204ENST00000565023 MINOS1-NBL1R4GNA1 71 aa10.98□□□□□ -0.65
VPS9D1-204ENST00000565023 SHISA3A0PJX4 238 aa10.97□□□□□ -0.65
VPS9D1-204ENST00000565023 A6NDX4 124 aa10.97□□□□□ -0.65
VPS9D1-204ENST00000565023 ZNF729A6NN14 1252 aaPredicted RBP10.97□□□□□ -0.65
VPS9D1-204ENST00000565023 SLC17A2O00624 439 aa10.97□□□□□ -0.65
VPS9D1-204ENST00000565023 GEMIN2O14893 280 aaKnown RBP10.97□□□□□ -0.65
VPS9D1-204ENST00000565023 HTR2CP28335 458 aa10.97□□□□□ -0.65
VPS9D1-204ENST00000565023 FGF9P31371 208 aaPredicted RBP10.97□□□□□ -0.65
VPS9D1-204ENST00000565023 KIR2DS4P43632 304 aa10.97□□□□□ -0.65
VPS9D1-204ENST00000565023 PSMD7P51665 324 aa10.97□□□□□ -0.65
VPS9D1-204ENST00000565023 EFNB2P52799 333 aa10.97□□□□□ -0.65
VPS9D1-204ENST00000565023 MPV17LQ2QL34 196 aa10.97□□□□□ -0.65
VPS9D1-204ENST00000565023 LIAT1Q6ZQX7 453 aa10.97□□□□□ -0.65
VPS9D1-204ENST00000565023 Q6ZTK2 550 aa10.97□□□□□ -0.65
VPS9D1-204ENST00000565023 LYG1Q8N1E2 194 aa10.97□□□□□ -0.65
VPS9D1-204ENST00000565023 SUMF2Q8NBJ7 301 aa10.97□□□□□ -0.65
VPS9D1-204ENST00000565023 TMEM104Q8NE00 496 aa10.97□□□□□ -0.65
VPS9D1-204ENST00000565023 OR6M1Q8NGM8 313 aa10.97□□□□□ -0.65
VPS9D1-204ENST00000565023 UBALD1Q8TB05 177 aa10.97□□□□□ -0.65
VPS9D1-204ENST00000565023 ZNF596Q8TC21 504 aa10.97□□□□□ -0.65
VPS9D1-204ENST00000565023 BARHL1Q9BZE3 327 aa10.97□□□□□ -0.65
VPS9D1-204ENST00000565023 RANBP3Q9H6Z4 567 aaPredicted RBP10.97□□□□□ -0.65
VPS9D1-204ENST00000565023 CALYQ9NYX4 217 aa10.97□□□□□ -0.65
VPS9D1-204ENST00000565023 DPM3Q9P2X0 92 aa10.97□□□□□ -0.65
VPS9D1-204ENST00000565023 PITPNC1Q9UKF7 332 aa10.97□□□□□ -0.65
VPS9D1-204ENST00000565023 VGLL3A8MV65 326 aa10.96□□□□□ -0.65
VPS9D1-204ENST00000565023 PEX14O75381 377 aa10.96□□□□□ -0.65
VPS9D1-204ENST00000565023 VSIG8P0DPA2 414 aa10.96□□□□□ -0.65
VPS9D1-204ENST00000565023 MGMTP16455 207 aa10.96□□□□□ -0.65
VPS9D1-204ENST00000565023 KCNJ3P48549 501 aa10.96□□□□□ -0.65
VPS9D1-204ENST00000565023 GNG10P50151 68 aa10.96□□□□□ -0.65
VPS9D1-204ENST00000565023 PAX5Q02548 391 aa10.96□□□□□ -0.65
VPS9D1-204ENST00000565023 RSBN1Q5VWQ0 802 aaPredicted RBP10.96□□□□□ -0.65
VPS9D1-204ENST00000565023 C22orf42Q6IC83 251 aa10.96□□□□□ -0.65
VPS9D1-204ENST00000565023 RTN4RL2Q86UN3 420 aa10.96□□□□□ -0.65
VPS9D1-204ENST00000565023 CCDC107Q8WV48 283 aa10.96□□□□□ -0.65
VPS9D1-204ENST00000565023 DPCDQ9BVM2 203 aaPredicted RBP10.96□□□□□ -0.65
VPS9D1-204ENST00000565023 CST11Q9H112 138 aa10.96□□□□□ -0.65
VPS9D1-204ENST00000565023 BANF2Q9H503 90 aa10.96□□□□□ -0.65
VPS9D1-204ENST00000565023 ZNF702PQ9H963 129 aa10.96□□□□□ -0.65
VPS9D1-204ENST00000565023 VCX3AQ9NNX9 186 aa10.96□□□□□ -0.65
VPS9D1-204ENST00000565023 TXNL4BQ9NX01 149 aaKnown RBP10.96□□□□□ -0.65
VPS9D1-204ENST00000565023 IDI2-AS1Q9NZ38 188 aa10.96□□□□□ -0.65
VPS9D1-204ENST00000565023 RCC2Q9P258 522 aaKnown RBP10.96□□□□□ -0.65
VPS9D1-204ENST00000565023 V9GY05 133 aa10.96□□□□□ -0.65
VPS9D1-204ENST00000565023 KBTBD11-OT1A0A1B0GTJ5 212 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 FAM90A10PA6NDY2 464 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 FAM90A18PA6NE21 464 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 FAM90A16PA6NEW6 464 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 FAM90A20PA6NIJ5 464 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 FAM90A7PA6NKC0 464 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 FAM90A22PA8MWA6 464 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 FAM90A12PA8MX19 464 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 FAM90A5PA8MXJ8 464 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 FAM90A23PA8MXZ1 464 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 LEUTXA8MZ59 168 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 CRTAPO75718 401 aaPredicted RBP10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 FAM90A15PP0C7V4 464 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 FAM90A13PP0C7W8 464 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 FAM90A14PP0C7W9 464 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 FAM90A24PP0C7X0 464 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 CD36P16671 472 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 MYL9P24844 172 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 SSTR5P35346 364 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 PRRX1P54821 245 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 BLCAPP62952 87 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 QRFPP83859 136 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 HERPUD1Q15011 391 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 HLA-DRB5Q30154 266 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 TMEM95Q3KNT9 176 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 Q6ZS46 218 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 ZNF565Q8N9K5 539 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 FAM46BQ96A09 425 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 KIRREL1Q96J84 757 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 Q96M66 194 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 SELENOIQ9C0D9 397 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 OR51E2Q9H255 320 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 NCOR1P1Q9H4R4 102 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 PLGRKTQ9HBL7 147 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 SPACA1Q9HBV2 294 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 SSR3Q9UNL2 185 aa10.95□□□□□ -0.66
VPS9D1-204ENST00000565023 A0A1W2PPE3 182 aa10.94□□□□□ -0.66
VPS9D1-204ENST00000565023 SH2D7A6NKC9 451 aaPredicted RBP10.94□□□□□ -0.66
VPS9D1-204ENST00000565023 TMEM14DPA8MWL7 114 aa10.94□□□□□ -0.66
VPS9D1-204ENST00000565023 PDCD5O14737 125 aa10.94□□□□□ -0.66
VPS9D1-204ENST00000565023 BPNT1O95861 308 aa10.94□□□□□ -0.66
VPS9D1-204ENST00000565023 IL1AP01583 271 aa10.94□□□□□ -0.66
VPS9D1-204ENST00000565023 CSF1P09603 554 aa10.94□□□□□ -0.66
VPS9D1-204ENST00000565023 BRS3P32247 399 aa10.94□□□□□ -0.66
VPS9D1-204ENST00000565023 RPS27AP62979 156 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms