RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 KIAA2026Q5HYC2 2103 aa14.03□□□□□ -0.16
CMTM3-208ENST00000564247 hADV38S2A0JD32 116 aa14.03□□□□□ -0.16
CMTM3-208ENST00000564247 ODAMA1E959 279 aa14.03□□□□□ -0.16
CMTM3-208ENST00000564247 MEIS3P1A6NDR6 274 aa14.03□□□□□ -0.16
CMTM3-208ENST00000564247 IGHV2-5P01817 119 aa14.03□□□□□ -0.16
CMTM3-208ENST00000564247 MEF2CQ06413 473 aaPredicted RBP14.03□□□□□ -0.16
CMTM3-208ENST00000564247 SRSF7Q16629 238 aaKnown RBP eCLIP14.03□□□□□ -0.16
CMTM3-208ENST00000564247 C11orf91Q3C1V1 193 aa14.03□□□□□ -0.16
CMTM3-208ENST00000564247 ZNF841Q6ZN19 808 aa14.03□□□□□ -0.16
CMTM3-208ENST00000564247 MOB1BQ7L9L4 216 aa14.03□□□□□ -0.16
CMTM3-208ENST00000564247 MRPL30Q8TCC3 161 aaKnown RBP14.03□□□□□ -0.16
CMTM3-208ENST00000564247 SSBP3Q9BWW4 388 aaPredicted RBP14.03□□□□□ -0.16
CMTM3-208ENST00000564247 ZNF286AQ9HBT8 521 aa14.03□□□□□ -0.16
CMTM3-208ENST00000564247 TAS2R8Q9NYW2 309 aa14.03□□□□□ -0.16
CMTM3-208ENST00000564247 KLK11Q9UBX7 282 aa14.03□□□□□ -0.16
CMTM3-208ENST00000564247 ABCA2Q9BZC7 2435 aa14.03□□□□□ -0.16
CMTM3-208ENST00000564247 TRGV10A0A0A0MS01 117 aa14.02□□□□□ -0.17
CMTM3-208ENST00000564247 TRBV23-1A0A0A0MS06 115 aa14.02□□□□□ -0.17
CMTM3-208ENST00000564247 J3QRK9 145 aa14.02□□□□□ -0.17
CMTM3-208ENST00000564247 ORC5O43913 435 aa14.02□□□□□ -0.17
CMTM3-208ENST00000564247 FCGR3AP08637 254 aa14.02□□□□□ -0.17
CMTM3-208ENST00000564247 GZMHP20718 246 aa14.02□□□□□ -0.17
CMTM3-208ENST00000564247 RCVRNP35243 200 aa14.02□□□□□ -0.17
CMTM3-208ENST00000564247 LMO4P61968 165 aa14.02□□□□□ -0.17
CMTM3-208ENST00000564247 RPL31P62899 125 aaKnown RBP14.02□□□□□ -0.17
CMTM3-208ENST00000564247 C6orf183Q5T699 404 aa14.02□□□□□ -0.17
CMTM3-208ENST00000564247 TRAT1Q6PIZ9 186 aa14.02□□□□□ -0.17
CMTM3-208ENST00000564247 HOGA1Q86XE5 327 aa14.02□□□□□ -0.17
CMTM3-208ENST00000564247 TPRX1Q8N7U7 411 aa14.02□□□□□ -0.17
CMTM3-208ENST00000564247 BORCS5Q969J3 196 aa14.02□□□□□ -0.17
CMTM3-208ENST00000564247 CYYR1Q96J86 154 aa14.02□□□□□ -0.17
CMTM3-208ENST00000564247 Q9N2K0 584 aa14.02□□□□□ -0.17
CMTM3-208ENST00000564247 RAB9BQ9NP90 201 aa14.02□□□□□ -0.17
CMTM3-208ENST00000564247 ZNF230Q9UIE0 474 aaPredicted RBP14.02□□□□□ -0.17
CMTM3-208ENST00000564247 KIR2DS1A0A191URI9 304 aa14.01□□□□□ -0.17
CMTM3-208ENST00000564247 A0A1W2PPH5 198 aa14.01□□□□□ -0.17
CMTM3-208ENST00000564247 CSF1P09603 554 aa14.01□□□□□ -0.17
CMTM3-208ENST00000564247 GDNFP39905 211 aa14.01□□□□□ -0.17
CMTM3-208ENST00000564247 KIR2DS4P43632 304 aa14.01□□□□□ -0.17
CMTM3-208ENST00000564247 AP3S2P59780 193 aa14.01□□□□□ -0.17
CMTM3-208ENST00000564247 KIR2DS1Q14954 304 aa14.01□□□□□ -0.17
CMTM3-208ENST00000564247 BAK1Q16611 211 aa14.01□□□□□ -0.17
CMTM3-208ENST00000564247 ZNF880Q6PDB4 577 aa14.01□□□□□ -0.17
CMTM3-208ENST00000564247 C16orf87Q6PH81 154 aa14.01□□□□□ -0.17
CMTM3-208ENST00000564247 BTN2A1Q7KYR7 527 aa14.01□□□□□ -0.17
CMTM3-208ENST00000564247 FAM185AQ8N0U4 392 aa14.01□□□□□ -0.17
CMTM3-208ENST00000564247 FGFRL1Q8N441 504 aa14.01□□□□□ -0.17
CMTM3-208ENST00000564247 GVQW1Q8N7I0 195 aa14.01□□□□□ -0.17
CMTM3-208ENST00000564247 BEST4Q8NFU0 473 aa14.01□□□□□ -0.17
CMTM3-208ENST00000564247 SDHCQ99643 169 aaPredicted RBP14.01□□□□□ -0.17
CMTM3-208ENST00000564247 DCTN5Q9BTE1 182 aa14.01□□□□□ -0.17
CMTM3-208ENST00000564247 TMEM160Q9NX00 188 aa14.01□□□□□ -0.17
CMTM3-208ENST00000564247 ZNF107Q9UII5 783 aaPredicted RBP14.01□□□□□ -0.17
CMTM3-208ENST00000564247 RBMX2Q9Y388 322 aaKnown RBP14.01□□□□□ -0.17
CMTM3-208ENST00000564247 LOC105371242A0A075B767 164 aa14□□□□□ -0.17
CMTM3-208ENST00000564247 A0A1W2PQ09 198 aa14□□□□□ -0.17
CMTM3-208ENST00000564247 TRDCB7Z8K6 153 aa14□□□□□ -0.17
CMTM3-208ENST00000564247 FOXH1O75593 365 aa14□□□□□ -0.17
CMTM3-208ENST00000564247 FCER2P06734 321 aa14□□□□□ -0.17
CMTM3-208ENST00000564247 IL7P13232 177 aa14□□□□□ -0.17
CMTM3-208ENST00000564247 ZNF16P17020 682 aaPredicted RBP14□□□□□ -0.17
CMTM3-208ENST00000564247 RCC1P18754 421 aaPredicted RBP14□□□□□ -0.17
CMTM3-208ENST00000564247 CHRFAM7AQ494W8 412 aa14□□□□□ -0.17
CMTM3-208ENST00000564247 ZNF57Q68EA5 555 aaPredicted RBP14□□□□□ -0.17
CMTM3-208ENST00000564247 Q6ZS49 121 aa14□□□□□ -0.17
CMTM3-208ENST00000564247 ZNF554Q86TJ5 538 aa14□□□□□ -0.17
CMTM3-208ENST00000564247 TOMM5Q8N4H5 51 aa14□□□□□ -0.17
CMTM3-208ENST00000564247 CORO2AQ92828 525 aa14□□□□□ -0.17
CMTM3-208ENST00000564247 MSI2Q96DH6 328 aaKnown RBP14□□□□□ -0.17
CMTM3-208ENST00000564247 ABCB10Q9NRK6 738 aa14□□□□□ -0.17
CMTM3-208ENST00000564247 MBNL3Q9NUK0 354 aaKnown RBP14□□□□□ -0.17
CMTM3-208ENST00000564247 UBE2J1Q9Y385 318 aaPredicted RBP14□□□□□ -0.17
CMTM3-208ENST00000564247 LINC00312Q9Y6C7 94 aa14□□□□□ -0.17
CMTM3-208ENST00000564247 PHF1O43189 567 aaPredicted RBP13.99□□□□□ -0.17
CMTM3-208ENST00000564247 SPINT2O43291 252 aa13.99□□□□□ -0.17
CMTM3-208ENST00000564247 UPK1BO75841 260 aa13.99□□□□□ -0.17
CMTM3-208ENST00000564247 NAT1P18440 290 aa13.99□□□□□ -0.17
CMTM3-208ENST00000564247 GLP1RP43220 463 aa13.99□□□□□ -0.17
CMTM3-208ENST00000564247 OR3A3P47888 321 aa13.99□□□□□ -0.17
CMTM3-208ENST00000564247 TAS2R19P59542 299 aa13.99□□□□□ -0.17
CMTM3-208ENST00000564247 ARPC4P59998 168 aa13.99□□□□□ -0.17
CMTM3-208ENST00000564247 SEC61A1P61619 476 aaKnown RBP13.99□□□□□ -0.17
CMTM3-208ENST00000564247 TMEM200BQ69YZ2 307 aa13.99□□□□□ -0.17
CMTM3-208ENST00000564247 PRIMA1Q86XR5 153 aa13.99□□□□□ -0.17
CMTM3-208ENST00000564247 TMEM229BQ8NBD8 167 aa13.99□□□□□ -0.17
CMTM3-208ENST00000564247 MRGPRDQ8TDS7 321 aa13.99□□□□□ -0.17
CMTM3-208ENST00000564247 MAFIPQ8WZ33 124 aa13.99□□□□□ -0.17
CMTM3-208ENST00000564247 C1orf159Q96HA4 380 aa13.99□□□□□ -0.17
CMTM3-208ENST00000564247 TAF9BQ9HBM6 251 aa13.99□□□□□ -0.17
CMTM3-208ENST00000564247 C19orf12Q9NSK7 152 aa13.99□□□□□ -0.17
CMTM3-208ENST00000564247 OPN4Q9UHM6 478 aa13.99□□□□□ -0.17
CMTM3-208ENST00000564247 ANAPC10Q9UM13 185 aa13.99□□□□□ -0.17
CMTM3-208ENST00000564247 SVEP1Q4LDE5 3571 aa13.99□□□□□ -0.17
CMTM3-208ENST00000564247 TRAV39A0A0B4J263 110 aa13.98□□□□□ -0.17
CMTM3-208ENST00000564247 PPIAL4CA0A0B4J2A2 164 aa13.98□□□□□ -0.17
CMTM3-208ENST00000564247 ZNF736B4DX44 427 aaPredicted RBP13.98□□□□□ -0.17
CMTM3-208ENST00000564247 LANCL1O43813 399 aa13.98□□□□□ -0.17
CMTM3-208ENST00000564247 FCN3O75636 299 aa13.98□□□□□ -0.17
CMTM3-208ENST00000564247 CTXN2P0C2S0 81 aa13.98□□□□□ -0.17
CMTM3-208ENST00000564247 PPIAL4GP0DN37 164 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms