RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 PMS2P11Q13670 270 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 ACSF3Q4G176 576 aaPredicted RBP9.54□□□□□ -0.88
TCF4-222ENST00000564228 ARSJQ5FYB0 599 aaPredicted RBP9.54□□□□□ -0.88
TCF4-222ENST00000564228 PRAMEF20Q5VT98 475 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 LYZL2Q7Z4W2 148 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 LINC00346Q8IVM7 164 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 MRPL41Q8IXM3 137 aaKnown RBP9.54□□□□□ -0.88
TCF4-222ENST00000564228 FAM185AQ8N0U4 392 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 OR52M1Q8NGK5 317 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 MSI2Q96DH6 328 aaKnown RBP9.54□□□□□ -0.88
TCF4-222ENST00000564228 FER1L6-AS2Q96M78 137 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 C20orf144Q9BQM9 153 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 AGMATQ9BSE5 352 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 CALHM2Q9HA72 323 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 CENPMQ9NSP4 180 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 IGSF23A1L1A6 192 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 NPIPB7O75200 414 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 DBHP09172 617 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 WT1P19544 449 aaPredicted RBP9.54□□□□□ -0.88
TCF4-222ENST00000564228 CCL1P22362 96 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 BLVRBP30043 206 aaPredicted RBP9.54□□□□□ -0.88
TCF4-222ENST00000564228 GNG10P50151 68 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 ZNF133P52736 654 aaPredicted RBP9.54□□□□□ -0.88
TCF4-222ENST00000564228 SRPXP78539 464 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 ABCA11PQ4W5N1 156 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 ACTL10Q5JWF8 245 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 CMTM1Q8IZ96 169 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 GBGT1Q8N5D6 347 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 RTN4IP1Q8WWV3 396 aaPredicted RBP9.54□□□□□ -0.88
TCF4-222ENST00000564228 ZNF524Q96C55 264 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 SLAMF6Q96DU3 332 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 KCNK17Q96T54 332 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 KLHDC3Q9BQ90 382 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 LPAR2Q9HBW0 351 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 Q9N2K0 584 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 LYRM2Q9NU23 88 aaPredicted RBP9.54□□□□□ -0.88
TCF4-222ENST00000564228 NAGKQ9UJ70 344 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 ANXA10Q9UJ72 324 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 GAB2Q9UQC2 676 aa9.54□□□□□ -0.88
TCF4-222ENST00000564228 ZFHX4Q86UP3 3567 aa9.53□□□□□ -0.88
TCF4-222ENST00000564228 A0A1W2PP11 408 aa9.53□□□□□ -0.88
TCF4-222ENST00000564228 AHSA1O95433 338 aa9.53□□□□□ -0.88
TCF4-222ENST00000564228 TYMSP04818 313 aa9.53□□□□□ -0.88
TCF4-222ENST00000564228 RANP62826 216 aaKnown RBP9.53□□□□□ -0.88
TCF4-222ENST00000564228 P2RY6Q15077 328 aa9.53□□□□□ -0.88
TCF4-222ENST00000564228 TMEM241Q24JQ0 296 aa9.53□□□□□ -0.88
TCF4-222ENST00000564228 ZNF468Q5VIY5 522 aaPredicted RBP9.53□□□□□ -0.88
TCF4-222ENST00000564228 ZNF880Q6PDB4 577 aa9.53□□□□□ -0.88
TCF4-222ENST00000564228 ZNF66Q6ZN08 573 aa9.53□□□□□ -0.88
TCF4-222ENST00000564228 RNF144BQ7Z419 303 aa9.53□□□□□ -0.88
TCF4-222ENST00000564228 ASB10Q8WXI3 467 aa9.53□□□□□ -0.88
TCF4-222ENST00000564228 PSMF1Q92530 271 aa9.53□□□□□ -0.88
TCF4-222ENST00000564228 ZNF845Q96IR2 970 aaPredicted RBP9.53□□□□□ -0.88
TCF4-222ENST00000564228 MRGPRX4Q96LA9 322 aa9.53□□□□□ -0.88
TCF4-222ENST00000564228 IMMP2LQ96T52 175 aa9.53□□□□□ -0.88
TCF4-222ENST00000564228 GPER1Q99527 375 aa9.53□□□□□ -0.88
TCF4-222ENST00000564228 SPIN2AQ99865 258 aa9.53□□□□□ -0.88
TCF4-222ENST00000564228 SPIN2BQ9BPZ2 258 aa9.53□□□□□ -0.88
TCF4-222ENST00000564228 GAL3ST2Q9H3Q3 398 aa9.53□□□□□ -0.88
TCF4-222ENST00000564228 CHST11Q9NPF2 352 aa9.53□□□□□ -0.88
TCF4-222ENST00000564228 NAT8Q9UHE5 227 aa9.53□□□□□ -0.88
TCF4-222ENST00000564228 CHCHD2Q9Y6H1 151 aaPredicted RBP9.53□□□□□ -0.88
TCF4-222ENST00000564228 MED12Q93074 2177 aa9.53□□□□□ -0.88
TCF4-222ENST00000564228 FAM24AA6NFZ4 105 aa9.52□□□□□ -0.88
TCF4-222ENST00000564228 ITGB1BP1O14713 200 aa9.52□□□□□ -0.88
TCF4-222ENST00000564228 IL6RP08887 468 aaPredicted RBP9.52□□□□□ -0.88
TCF4-222ENST00000564228 BRS3P32247 399 aa9.52□□□□□ -0.88
TCF4-222ENST00000564228 DAP3P51398 398 aaKnown RBP9.52□□□□□ -0.88
TCF4-222ENST00000564228 UCP3P55916 312 aa9.52□□□□□ -0.88
TCF4-222ENST00000564228 TAS2R30P59541 319 aa9.52□□□□□ -0.88
TCF4-222ENST00000564228 C17orf67Q0P5P2 114 aa9.52□□□□□ -0.88
TCF4-222ENST00000564228 ZP4Q12836 540 aa9.52□□□□□ -0.88
TCF4-222ENST00000564228 FBXW9Q5XUX1 488 aa9.52□□□□□ -0.88
TCF4-222ENST00000564228 CCDC71LQ8N9Z2 235 aa9.52□□□□□ -0.88
TCF4-222ENST00000564228 OR51E1Q8TCB6 317 aa9.52□□□□□ -0.88
TCF4-222ENST00000564228 TMEM171Q8WVE6 324 aa9.52□□□□□ -0.88
TCF4-222ENST00000564228 KCNE4Q8WWG9 221 aa9.52□□□□□ -0.88
TCF4-222ENST00000564228 SPACA5Q96QH8 159 aa9.52□□□□□ -0.88
TCF4-222ENST00000564228 MIEN1Q9BRT3 115 aa9.52□□□□□ -0.88
TCF4-222ENST00000564228 FAAP24Q9BTP7 215 aa9.52□□□□□ -0.88
TCF4-222ENST00000564228 ZNF701Q9NV72 531 aaPredicted RBP9.52□□□□□ -0.88
TCF4-222ENST00000564228 NECAP2Q9NVZ3 263 aa9.52□□□□□ -0.88
TCF4-222ENST00000564228 SLC7A11Q9UPY5 501 aa9.52□□□□□ -0.88
TCF4-222ENST00000564228 LAMP3Q9UQV4 416 aa9.52□□□□□ -0.88
TCF4-222ENST00000564228 NCKAP5O14513 1909 aa9.52□□□□□ -0.88
TCF4-222ENST00000564228 LOC400499M0QZD8 3231 aa9.52□□□□□ -0.88
TCF4-222ENST00000564228 FRYQ5TBA9 3013 aa9.52□□□□□ -0.89
TCF4-222ENST00000564228 IGKV1D-8A0A087WSZ0 117 aa9.52□□□□□ -0.89
TCF4-222ENST00000564228 G3V3Y1 287 aa9.52□□□□□ -0.89
TCF4-222ENST00000564228 KLK10O43240 276 aa9.52□□□□□ -0.89
TCF4-222ENST00000564228 TMEM225BP0DP42 221 aa9.52□□□□□ -0.89
TCF4-222ENST00000564228 CCL3P10147 92 aa9.52□□□□□ -0.89
TCF4-222ENST00000564228 GP1BBP13224 206 aa9.52□□□□□ -0.89
TCF4-222ENST00000564228 PGCP20142 388 aa9.52□□□□□ -0.89
TCF4-222ENST00000564228 PTGDSP41222 190 aa9.52□□□□□ -0.89
TCF4-222ENST00000564228 RPL29P47914 159 aaKnown RBP9.52□□□□□ -0.89
TCF4-222ENST00000564228 RRADP55042 308 aa9.52□□□□□ -0.89
TCF4-222ENST00000564228 VAMP2P63027 116 aa9.52□□□□□ -0.89
TCF4-222ENST00000564228 SP6Q3SY56 376 aa9.52□□□□□ -0.89
TCF4-222ENST00000564228 ABHD17BQ5VST6 288 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms