RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 H3BUI4 141 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 APOL3O95236 402 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 GNAO1P09471 354 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 NFYBP25208 207 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 POU3F4P49335 361 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 INSL3P51460 131 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 FUT6P51993 359 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 ARHGDIBP52566 201 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 CXCR4P61073 352 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 ZNF816Q0VGE8 651 aaPredicted RBP7.99□□□□□ -1.13
SF3B3-204ENST00000563739 HES1Q14469 280 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 C19orf54Q5BKX5 351 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 OR8H3Q8N146 312 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 PRSS35Q8N3Z0 413 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 ZNF491Q8N8L2 437 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 RHOXF1Q8NHV9 184 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 PLPPR1Q8TBJ4 325 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 ASB17Q8WXJ9 295 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 DLX4Q92988 240 aaPredicted RBP7.99□□□□□ -1.13
SF3B3-204ENST00000563739 ST6GALNAC6Q969X2 333 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 CREB3L1Q96BA8 519 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 KCTD7Q96MP8 289 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 MRPS26Q9BYN8 205 aaKnown RBP7.99□□□□□ -1.13
SF3B3-204ENST00000563739 ZMAT4Q9H898 229 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 CALYQ9NYX4 217 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 GTF2A1LQ9UNN4 478 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 MYRFQ9Y2G1 1151 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 DNAH11Q96DT5 4516 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 TRAV39A0A0B4J263 110 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 SNTNA6NMZ2 147 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 ZNF670-ZNF695F2Z2N8 137 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 TOR1AO14656 332 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 HSD17B6O14756 317 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 KDM4BO94953 1096 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 IL1AP01583 271 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 IGLV1-40P01703 118 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 IGF1P05019 195 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 DBTP11182 482 aaKnown RBP7.98□□□□□ -1.13
SF3B3-204ENST00000563739 SSTR5P35346 364 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 REG1BP48304 166 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 GNG10P50151 68 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 SLURP1P55000 103 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 F2RL1P55085 397 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 ISL1P61371 349 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 KCTD21Q4G0X4 260 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 Q8IYB0 196 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 SETD9Q8NE22 299 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 OR10H4Q8NGA5 316 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 OR51T1Q8NGJ9 327 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 RFT1Q96AA3 541 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 Q96MT0 163 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 SPACA5Q96QH8 159 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 OR5B12Q96R08 314 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 TBX5Q99593 518 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 THAP7Q9BT49 309 aaPredicted RBP7.98□□□□□ -1.13
SF3B3-204ENST00000563739 YTHDF1Q9BYJ9 559 aaKnown RBP7.98□□□□□ -1.13
SF3B3-204ENST00000563739 RETNQ9HD89 108 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 EXOSC4Q9NPD3 245 aaKnown RBP7.98□□□□□ -1.13
SF3B3-204ENST00000563739 PCDHB16Q9NRJ7 776 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 ING3Q9NXR8 418 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 KIF25Q9UIL4 384 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 GSTK1Q9Y2Q3 226 aa7.98□□□□□ -1.13
SF3B3-204ENST00000563739 SIRT4Q9Y6E7 314 aaPredicted RBP7.98□□□□□ -1.13
SF3B3-204ENST00000563739 TRAV24A0A0B4J272 114 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 LOC107986453A0A1B0GWG9 222 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 A0A1W2PQL4 384 aaPredicted RBP7.97□□□□□ -1.13
SF3B3-204ENST00000563739 FAM90A10PA6NDY2 464 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 G3V318 75 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 J3QRE1 110 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 OVOL1O14753 267 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 LDLRAD4O15165 306 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 SOX15O60248 233 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 WBP4O75554 376 aaKnown RBP7.97□□□□□ -1.13
SF3B3-204ENST00000563739 OR8U8P0C7N1 319 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 OR2T7P0C7T2 308 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 ATP6V1E1P36543 226 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 GLP1RP43220 463 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 RPL5P46777 297 aaKnown RBP7.97□□□□□ -1.13
SF3B3-204ENST00000563739 RAB7AP51149 207 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 PRRX1P54821 245 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 NDPQ00604 133 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 ZNF616Q08AN1 781 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 PDZK1IP1Q13113 114 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 MADCAM1Q13477 382 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 SRSF7Q16629 238 aaKnown RBP eCLIP7.97□□□□□ -1.13
SF3B3-204ENST00000563739 KRBOX4Q5JUW0 171 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 RSBN1Q5VWQ0 802 aaPredicted RBP7.97□□□□□ -1.13
SF3B3-204ENST00000563739 ACSM6Q6P461 480 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 ZNF429Q86V71 674 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 RDH10Q8IZV5 341 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 DNAAF1Q8NEP3 725 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 TSPAN14Q8NG11 270 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 OR4D6Q8NGJ1 314 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 OR1N2Q8NGR9 330 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 OR10AC1Q8NH08 325 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 CNIH3Q8TBE1 160 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 LGALS12Q96DT0 336 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 BORCS8Q96FH0 119 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 CYYR1Q96J86 154 aa7.97□□□□□ -1.13
SF3B3-204ENST00000563739 UBE2E2Q96LR5 201 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms