RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 SNX22Q96L94 193 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 PHB2Q99623 299 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 BEX2Q9BXY8 128 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 DNTTIP1Q9H147 329 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 BEX1Q9HBH7 125 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 MBNL3Q9NUK0 354 aaKnown RBP8.14□□□□□ -1.11
UBFD1-202ENST00000563366 OPN4Q9UHM6 478 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 TRAPPC2LQ9UL33 140 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 VSIG4Q9Y279 399 aa8.14□□□□□ -1.11
UBFD1-202ENST00000563366 ANKHD1Q8IWZ3 2542 aaKnown RBP8.13□□□□□ -1.11
UBFD1-202ENST00000563366 IGKV1D-8A0A087WSZ0 117 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 TRAV38-1A0A0B4J264 116 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 OOEPA6NGQ2 149 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 NKX6-3A6NJ46 265 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 RFPL4AA6NLU0 287 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 RFPL4AL1F8VTS6 287 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 BOLA2-SMG1P6H3BVE0 249 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 MGST3O14880 152 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 WNT9BO14905 357 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 SNAPC5O75971 98 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 DUS4LO95620 317 aaKnown RBP8.13□□□□□ -1.11
UBFD1-202ENST00000563366 PPYP01298 95 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 HPXP02790 462 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 CTSDP07339 412 aaPredicted RBP8.13□□□□□ -1.11
UBFD1-202ENST00000563366 GSTT2P0CG29 244 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 ZNF728P0DKX0 622 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 VSIG10L2P0DP72 767 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 PSG2P11465 335 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 S100GP29377 79 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 PRDX2P32119 198 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 GABRA2P47869 451 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 UQCRFS1P47985 274 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 NPY4RP50391 375 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 GMFBP60983 142 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 CCL8P80075 99 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 CD83Q01151 205 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 COL10A1Q03692 680 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 DHRS2Q13268 280 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 ATXN7L3Q14CW9 347 aaPredicted RBP8.13□□□□□ -1.11
UBFD1-202ENST00000563366 IGFBP7Q16270 282 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 ABCA11PQ4W5N1 156 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 TEX36Q5VZQ5 186 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 ZNF660Q6AZW8 331 aaPredicted RBP8.13□□□□□ -1.11
UBFD1-202ENST00000563366 SLC38A6Q8IZM9 456 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 FAM185AQ8N0U4 392 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 MUC15Q8N387 334 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 C12orf45Q8N5I9 185 aaPredicted RBP8.13□□□□□ -1.11
UBFD1-202ENST00000563366 CCDC71LQ8N9Z2 235 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 OR5T2Q8NGG2 359 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 OR10J5Q8NHC4 309 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 FAM216AQ8WUB2 273 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 NINJ1Q92982 152 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 MRGPRFQ96AM1 343 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 MOB3AQ96BX8 217 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 KIRREL1Q96J84 757 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 VRK1Q99986 396 aaPredicted RBP8.13□□□□□ -1.11
UBFD1-202ENST00000563366 SEC22CQ9BRL7 303 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 CABLES2Q9BTV7 478 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 FAM234AQ9H0X4 552 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 NCOR1P1Q9H4R4 102 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 MGAT4CQ9UBM8 478 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 ZNF222Q9UK12 451 aa8.13□□□□□ -1.11
UBFD1-202ENST00000563366 DIDO1Q9BTC0 2240 aaKnown RBP8.13□□□□□ -1.11
UBFD1-202ENST00000563366 MEIKINA0A087WXM9 373 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 A0A0B4J2A0 478 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 C9orf170A2RU37 121 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 FAM172BPA6NC97 362 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 OR5H14A6NHG9 310 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 DEFB108AA8MXU0 73 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.12□□□□□ -1.11
UBFD1-202ENST00000563366 BET1O15155 118 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 PSPNO60542 156 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 C1QBP02746 253 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 GIPP09681 153 aaPredicted RBP8.12□□□□□ -1.11
UBFD1-202ENST00000563366 AKR1C4P17516 323 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 CD34P28906 385 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 FCGR2CP31995 323 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 RAP2BP61225 183 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 DHODHQ02127 395 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 FCN2Q15485 313 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 CDSNQ15517 529 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 SGPP2Q8IWX5 399 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 MUC20Q8N307 709 aaPredicted RBP8.12□□□□□ -1.11
UBFD1-202ENST00000563366 ZNF565Q8N9K5 539 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 OR2AK2Q8NG84 335 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 COQ8AQ8NI60 647 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 PLPPR1Q8TBJ4 325 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 MITD1Q8WV92 249 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 LURAP1Q96LR2 239 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 ZNF436Q9C0F3 470 aaPredicted RBP8.12□□□□□ -1.11
UBFD1-202ENST00000563366 C5orf66Q9H5L9 145 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 RANBP3Q9H6Z4 567 aaPredicted RBP8.12□□□□□ -1.11
UBFD1-202ENST00000563366 ZNF665Q9H7R5 613 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 RANGRFQ9HD47 186 aaPredicted RBP8.12□□□□□ -1.11
UBFD1-202ENST00000563366 SHPKQ9UHJ6 478 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 KCNIP3Q9Y2W7 256 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 TPRP12270 2363 aaKnown RBP8.12□□□□□ -1.11
UBFD1-202ENST00000563366 USP24Q9UPU5 2620 aa8.12□□□□□ -1.11
UBFD1-202ENST00000563366 HIVEP3Q5T1R4 2406 aa8.11□□□□□ -1.11
UBFD1-202ENST00000563366 IGKV1D-17A0A075B6S4 117 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms