RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 OR8S1Q8NH09 359 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 PYDC1Q8WXC3 89 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 RAD51AP1Q96B01 352 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 OTUB2Q96DC9 234 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 SPIN2AQ99865 258 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 SPIN2BQ9BPZ2 258 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 THTPAQ9BU02 230 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 FAM107BQ9H098 131 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 C14orf166Q9Y224 244 aaKnown RBP1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 TBL2Q9Y4P3 447 aaKnown RBP1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 SLC22A7Q9Y694 548 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 PLXNB3Q9ULL4 1909 aa1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 CHD2O14647 1828 aaKnown RBP1.87□□□□□ -2.11
SHCBP1-202ENST00000563219 IGLV3-12A0A075B6K2 115 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 TRAV40A0A0B4J280 105 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 SPRR5A0A1B0GTR4 108 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 MYBPHLA2RUH7 354 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 FAM183AA6NL82 134 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 A8MUU9 505 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 E5RI56 91 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 ITGB1BP1O14713 200 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 TOX3O15405 576 aaPredicted RBP1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 KCNK2O95069 426 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 CA2P00918 260 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 FABP1P07148 127 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 AKR1C4P17516 323 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 ATF1P18846 271 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 F8A1P23610 371 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 CRABP2P29373 138 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 MPIP34949 423 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 TGFBR2P37173 567 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 ZNF83P51522 516 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 DLX6P56179 175 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 SMAGPQ0VAQ4 97 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 ZNF235Q14590 738 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 LY6EQ16553 131 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 CDKL4Q5MAI5 379 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 C3orf33Q6P1S2 294 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 FAM151BQ6UXP7 276 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 CLEC20AQ6ZU45 233 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 TCF23Q7RTU1 214 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 SLC35G3Q8N808 338 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 SPANXA2-OT1Q8N9U9 137 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 ZFP62Q8NB50 900 aaPredicted RBP1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 OR2M3Q8NG83 312 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 OR11L1Q8NGX0 322 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 OR52N1Q8NH53 320 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 PHOSPHO2Q8TCD6 241 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 SEC22CQ9BRL7 303 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 DERL2Q9GZP9 239 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 VSIRQ9H7M9 311 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 WDR54Q9H977 334 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 IMP3Q9NV31 184 aaKnown RBP1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 PARVAQ9NVD7 372 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 COMMD9Q9P000 198 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 DHCR7Q9UBM7 475 aaKnown RBP1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 ZNF230Q9UIE0 474 aaPredicted RBP1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 S4R3C0 116 aa1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 RPRD2Q5VT52 1461 aaKnown RBP1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 COL27A1Q8IZC6 1860 aaPredicted RBP1.86□□□□□ -2.11
SHCBP1-202ENST00000563219 KIAA0232Q92628 1395 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 NCOA3Q9Y6Q9 1424 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 NUP205Q92621 2012 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 A6NED7 52 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 METTL15A6NJ78 407 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 ZNF98A6NK75 572 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 CD300LBA8K4G0 201 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 C2orf74A8MZ97 194 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 LRRN3E7EW58 273 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 LIN7AO14910 233 aaPredicted RBP1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 BIRC5O15392 142 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 SLC37A4O43826 429 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 CIAO1O76071 339 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 EPPINO95925 133 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 LHBP01229 141 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 IGHV1-46P01743 117 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 TNNC2P02585 160 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 ORM1P02763 201 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 OR4E1P0C645 316 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 ZNF35P13682 527 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 GTF2F2P13984 249 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 UGT2B7P16662 529 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 HLA-DMAP28067 261 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 CD79BP40259 229 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 TGM4P49221 684 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 GNG10P50151 68 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 NUDT2P50583 147 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 STC1P52823 247 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 MP68P56378 58 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 AP3S2P59780 193 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 TMED2Q15363 201 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 CCDC58Q4VC31 144 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 SPOPLQ6IQ16 392 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 CASP12Q6UXS9 341 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 SMIM15Q7Z3B0 74 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 NEGR1Q7Z3B1 354 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 TAC4Q86UU9 113 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 DOLPP1Q86YN1 238 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 SLC13A5Q86YT5 568 aaPredicted RBP1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms