RNA–Protein interactions for RNA: ENST00000563010.1

CSK-204, Transcript of C-terminal Src kinase, human

TSL 2

Gene CSK, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSK-204	ENST00000563010	CCDC107	Q8WV48	283 aa		11.77	□□□□□ -0.53
CSK-204	ENST00000563010	RAB1C	Q92928	201 aa		11.77	□□□□□ -0.53
CSK-204	ENST00000563010	SDSL	Q96GA7	329 aa		11.77	□□□□□ -0.53
CSK-204	ENST00000563010	MED30	Q96HR3	178 aa		11.77	□□□□□ -0.53
CSK-204	ENST00000563010	GAFA1	Q96PS6	74 aa		11.77	□□□□□ -0.53
CSK-204	ENST00000563010	TINAGL1	Q9GZM7	467 aa	Predicted RBP	11.77	□□□□□ -0.53
CSK-204	ENST00000563010		Q9N2K0	584 aa		11.77	□□□□□ -0.53
CSK-204	ENST00000563010	NECAP2	Q9NVZ3	263 aa		11.77	□□□□□ -0.53
CSK-204	ENST00000563010	EHF	Q9NZC4	300 aa		11.77	□□□□□ -0.53
CSK-204	ENST00000563010	ANXA10	Q9UJ72	324 aa		11.77	□□□□□ -0.53
CSK-204	ENST00000563010	SCP2D1	Q9UJQ7	156 aa		11.77	□□□□□ -0.53
CSK-204	ENST00000563010	MEIKIN	A0A087WXM9	373 aa		11.76	□□□□□ -0.53
CSK-204	ENST00000563010	TRBV6-6	A0A0A6YYG2	114 aa		11.76	□□□□□ -0.53
CSK-204	ENST00000563010		K7N7A8	449 aa		11.76	□□□□□ -0.53
CSK-204	ENST00000563010	NDUFS8	O00217	210 aa		11.76	□□□□□ -0.53
CSK-204	ENST00000563010	SIGLEC5	O15389	551 aa		11.76	□□□□□ -0.53
CSK-204	ENST00000563010	PPIH	O43447	177 aa	Known RBP	11.76	□□□□□ -0.53
CSK-204	ENST00000563010	ADAM20	O43506	726 aa		11.76	□□□□□ -0.53
CSK-204	ENST00000563010	ZNF737	O75373	536 aa		11.76	□□□□□ -0.53
CSK-204	ENST00000563010	LY6H	O94772	140 aa		11.76	□□□□□ -0.53
CSK-204	ENST00000563010	TK1	P04183	234 aa		11.76	□□□□□ -0.53
CSK-204	ENST00000563010	GIF	P27352	417 aa		11.76	□□□□□ -0.53
CSK-204	ENST00000563010	SLC6A1	P30531	599 aa		11.76	□□□□□ -0.53
CSK-204	ENST00000563010	RFX2	P48378	723 aa		11.76	□□□□□ -0.53
CSK-204	ENST00000563010	TSPAN5	P62079	268 aa		11.76	□□□□□ -0.53
CSK-204	ENST00000563010	AES	Q08117	197 aa		11.76	□□□□□ -0.53
CSK-204	ENST00000563010	CDK10	Q15131	360 aa		11.76	□□□□□ -0.53
CSK-204	ENST00000563010	ZMYND11	Q15326	602 aa		11.76	□□□□□ -0.53
CSK-204	ENST00000563010	SCGB2B2	Q4G0G5	96 aa		11.76	□□□□□ -0.53
CSK-204	ENST00000563010	SLC35E4	Q6ICL7	350 aa		11.76	□□□□□ -0.53
CSK-204	ENST00000563010	CCBE1	Q6UXH8	406 aa	Predicted RBP	11.76	□□□□□ -0.53
CSK-204	ENST00000563010	ZNRF1	Q8ND25	227 aa		11.76	□□□□□ -0.53
CSK-204	ENST00000563010	OR4D10	Q8NGI6	311 aa		11.76	□□□□□ -0.53
CSK-204	ENST00000563010	OR51S1	Q8NGJ8	323 aa		11.76	□□□□□ -0.53
CSK-204	ENST00000563010	PRRT1	Q99946	306 aa		11.76	□□□□□ -0.53
CSK-204	ENST00000563010	FAM234A	Q9H0X4	552 aa		11.76	□□□□□ -0.53
CSK-204	ENST00000563010	CHODL	Q9H9P2	273 aa		11.76	□□□□□ -0.53
CSK-204	ENST00000563010	KCNIP1	Q9NZI2	227 aa		11.76	□□□□□ -0.53
CSK-204	ENST00000563010	CR1	P17927	2039 aa		11.76	□□□□□ -0.53
CSK-204	ENST00000563010	ABCA1	O95477	2261 aa		11.75	□□□□□ -0.53
CSK-204	ENST00000563010	TRDC	B7Z8K6	153 aa		11.75	□□□□□ -0.53
CSK-204	ENST00000563010	RP2	O75695	350 aa		11.75	□□□□□ -0.53
CSK-204	ENST00000563010	SPN	P16150	400 aa		11.75	□□□□□ -0.53
CSK-204	ENST00000563010	GLP1R	P43220	463 aa		11.75	□□□□□ -0.53
CSK-204	ENST00000563010	PDLIM4	P50479	330 aa		11.75	□□□□□ -0.53
CSK-204	ENST00000563010	CCR6	P51684	374 aa		11.75	□□□□□ -0.53
CSK-204	ENST00000563010	EDDM3B	P56851	147 aa		11.75	□□□□□ -0.53
CSK-204	ENST00000563010	TMEM33	P57088	247 aa		11.75	□□□□□ -0.53
CSK-204	ENST00000563010	HLA-DRB3	P79483	266 aa		11.75	□□□□□ -0.53
CSK-204	ENST00000563010	CLEC12B	Q2HXU8	276 aa		11.75	□□□□□ -0.53
CSK-204	ENST00000563010	LRRC10	Q5BKY1	277 aa		11.75	□□□□□ -0.53
CSK-204	ENST00000563010	VAX1	Q5SQQ9	334 aa		11.75	□□□□□ -0.53
CSK-204	ENST00000563010	C6orf183	Q5T699	404 aa		11.75	□□□□□ -0.53
CSK-204	ENST00000563010	ATPAF1	Q5TC12	328 aa	Predicted RBP	11.75	□□□□□ -0.53
CSK-204	ENST00000563010	RSBN1	Q5VWQ0	802 aa	Predicted RBP	11.75	□□□□□ -0.53
CSK-204	ENST00000563010	TRAT1	Q6PIZ9	186 aa		11.75	□□□□□ -0.53
CSK-204	ENST00000563010	CLEC2A	Q6UVW9	174 aa		11.75	□□□□□ -0.53
CSK-204	ENST00000563010		Q6ZS49	121 aa		11.75	□□□□□ -0.53
CSK-204	ENST00000563010	ARRDC1	Q8N5I2	433 aa		11.75	□□□□□ -0.53
CSK-204	ENST00000563010	FAM216B	Q8N7L0	139 aa		11.75	□□□□□ -0.53
CSK-204	ENST00000563010	SHARPIN	Q9H0F6	387 aa		11.75	□□□□□ -0.53
CSK-204	ENST00000563010	OCEL1	Q9H607	264 aa		11.75	□□□□□ -0.53
CSK-204	ENST00000563010	KIF25	Q9UIL4	384 aa		11.75	□□□□□ -0.53
CSK-204	ENST00000563010	MAB21L2	Q9Y586	359 aa		11.75	□□□□□ -0.53
CSK-204	ENST00000563010	NUBP2	Q9Y5Y2	271 aa		11.75	□□□□□ -0.53
CSK-204	ENST00000563010	IGKV1D-8	A0A087WSZ0	117 aa		11.74	□□□□□ -0.53
CSK-204	ENST00000563010	FABP7	O15540	132 aa		11.74	□□□□□ -0.53
CSK-204	ENST00000563010	NDUFB3	O43676	98 aa		11.74	□□□□□ -0.53
CSK-204	ENST00000563010	FSTL3	O95633	263 aa		11.74	□□□□□ -0.53
CSK-204	ENST00000563010	IGHV2-70	P01814	119 aa		11.74	□□□□□ -0.53
CSK-204	ENST00000563010	NDUFB7	P17568	137 aa		11.74	□□□□□ -0.53
CSK-204	ENST00000563010	BTC	P35070	178 aa		11.74	□□□□□ -0.53
CSK-204	ENST00000563010	RBMS2	Q15434	407 aa	Known RBP	11.74	□□□□□ -0.53
CSK-204	ENST00000563010	AVPI1	Q5T686	147 aa		11.74	□□□□□ -0.53
CSK-204	ENST00000563010	ZNF880	Q6PDB4	577 aa		11.74	□□□□□ -0.53
CSK-204	ENST00000563010	IDO2	Q6ZQW0	420 aa		11.74	□□□□□ -0.53
CSK-204	ENST00000563010	GAPT	Q8N292	157 aa		11.74	□□□□□ -0.53
CSK-204	ENST00000563010	ZNF525	Q8N782	197 aa		11.74	□□□□□ -0.53
CSK-204	ENST00000563010	DUSP18	Q8NEJ0	188 aa		11.74	□□□□□ -0.53
CSK-204	ENST00000563010	C10orf105	Q8TEF2	133 aa		11.74	□□□□□ -0.53
CSK-204	ENST00000563010	FAM168A	Q92567	244 aa		11.74	□□□□□ -0.53
CSK-204	ENST00000563010	TMEM246	Q9BRR3	403 aa		11.74	□□□□□ -0.53
CSK-204	ENST00000563010	GINS4	Q9BRT9	223 aa		11.74	□□□□□ -0.53
CSK-204	ENST00000563010	MMP28	Q9H239	520 aa		11.74	□□□□□ -0.53
CSK-204	ENST00000563010	SLC25A10	Q9UBX3	287 aa	Predicted RBP	11.74	□□□□□ -0.53
CSK-204	ENST00000563010	NBEAL1	Q6ZS30	2694 aa		11.73	□□□□□ -0.53
CSK-204	ENST00000563010	VWC2L	B2RUY7	222 aa		11.73	□□□□□ -0.53
CSK-204	ENST00000563010	SDCBP	O00560	298 aa	Predicted RBP	11.73	□□□□□ -0.53
CSK-204	ENST00000563010	TCRB	P04435	133 aa		11.73	□□□□□ -0.53
CSK-204	ENST00000563010	CTXN2	P0C2S0	81 aa		11.73	□□□□□ -0.53
CSK-204	ENST00000563010	GSTT2	P0CG29	244 aa		11.73	□□□□□ -0.53
CSK-204	ENST00000563010	SELL	P14151	372 aa		11.73	□□□□□ -0.53
CSK-204	ENST00000563010	RPS2	P15880	293 aa	Known RBP	11.73	□□□□□ -0.53
CSK-204	ENST00000563010	GPR6	P46095	362 aa	Predicted RBP	11.73	□□□□□ -0.53
CSK-204	ENST00000563010	GLIPR1	P48060	266 aa		11.73	□□□□□ -0.53
CSK-204	ENST00000563010	P2RX3	P56373	397 aa		11.73	□□□□□ -0.53
CSK-204	ENST00000563010	SEC61A1	P61619	476 aa	Known RBP	11.73	□□□□□ -0.53
CSK-204	ENST00000563010	PAX5	Q02548	391 aa		11.73	□□□□□ -0.53
CSK-204	ENST00000563010	PLA1A	Q53H76	456 aa		11.73	□□□□□ -0.53
CSK-204	ENST00000563010	NLRC3	Q7RTR2	1065 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms