RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 C9orf139Q6ZV77 190 aa13.38□□□□□ -0.27
USB1-206ENST00000562534 OR4K15Q8NH41 348 aa13.38□□□□□ -0.27
USB1-206ENST00000562534 ARL11Q969Q4 196 aa13.38□□□□□ -0.27
USB1-206ENST00000562534 ABCG5Q9H222 651 aa13.38□□□□□ -0.27
USB1-206ENST00000562534 MBNL3Q9NUK0 354 aaKnown RBP13.38□□□□□ -0.27
USB1-206ENST00000562534 CALYQ9NYX4 217 aa13.38□□□□□ -0.27
USB1-206ENST00000562534 ZNF69Q9UC07 566 aa13.38□□□□□ -0.27
USB1-206ENST00000562534 AK3Q9UIJ7 227 aa13.38□□□□□ -0.27
USB1-206ENST00000562534 IGHV3OR16-10A0A075B7F0 116 aa13.37□□□□□ -0.27
USB1-206ENST00000562534 CCDC160A6NGH7 325 aa13.37□□□□□ -0.27
USB1-206ENST00000562534 SERPINE3A8MV23 424 aa13.37□□□□□ -0.27
USB1-206ENST00000562534 SPINT2O43291 252 aa13.37□□□□□ -0.27
USB1-206ENST00000562534 NAPSAO96009 420 aa13.37□□□□□ -0.27
USB1-206ENST00000562534 HOXB4P17483 251 aaPredicted RBP13.37□□□□□ -0.27
USB1-206ENST00000562534 SPCS2Q15005 226 aa13.37□□□□□ -0.27
USB1-206ENST00000562534 CDNFQ49AH0 187 aa13.37□□□□□ -0.27
USB1-206ENST00000562534 RTN4RL2Q86UN3 420 aa13.37□□□□□ -0.27
USB1-206ENST00000562534 MRPL30Q8TCC3 161 aaKnown RBP13.37□□□□□ -0.27
USB1-206ENST00000562534 ISOC1Q96CN7 298 aa13.37□□□□□ -0.27
USB1-206ENST00000562534 CMSS1Q9BQ75 279 aaKnown RBP13.37□□□□□ -0.27
USB1-206ENST00000562534 TMEM133Q9H2Q1 129 aa13.37□□□□□ -0.27
USB1-206ENST00000562534 CHMP1AQ9HD42 196 aaPredicted RBP13.37□□□□□ -0.27
USB1-206ENST00000562534 IDI2-AS1Q9NZ38 188 aa13.37□□□□□ -0.27
USB1-206ENST00000562534 NDUFA13Q9P0J0 144 aa13.37□□□□□ -0.27
USB1-206ENST00000562534 MGAT4AQ9UM21 535 aa13.37□□□□□ -0.27
USB1-206ENST00000562534 FN1P02751 2386 aaKnown RBP13.37□□□□□ -0.27
USB1-206ENST00000562534 DSCAML1Q8TD84 2053 aa13.36□□□□□ -0.27
USB1-206ENST00000562534 TRBV6-6A0A0A6YYG2 114 aa13.36□□□□□ -0.27
USB1-206ENST00000562534 TRAV39A0A0B4J263 110 aa13.36□□□□□ -0.27
USB1-206ENST00000562534 ZNF701M0R085 212 aaPredicted RBP13.36□□□□□ -0.27
USB1-206ENST00000562534 CD3GP09693 182 aa13.36□□□□□ -0.27
USB1-206ENST00000562534 HIST1H1DP16402 221 aaKnown RBP13.36□□□□□ -0.27
USB1-206ENST00000562534 GNB3P16520 340 aa13.36□□□□□ -0.27
USB1-206ENST00000562534 RCC1P18754 421 aaPredicted RBP13.36□□□□□ -0.27
USB1-206ENST00000562534 DLX1P56177 255 aa13.36□□□□□ -0.27
USB1-206ENST00000562534 LGALS4P56470 323 aa13.36□□□□□ -0.27
USB1-206ENST00000562534 MIDNQ504T8 468 aa13.36□□□□□ -0.27
USB1-206ENST00000562534 UBE2NLQ5JXB2 153 aa13.36□□□□□ -0.27
USB1-206ENST00000562534 HCP5Q6MZN7 132 aa13.36□□□□□ -0.27
USB1-206ENST00000562534 BRD3OSQ6XYD6 125 aa13.36□□□□□ -0.27
USB1-206ENST00000562534 ZNF782Q6ZMW2 699 aaPredicted RBP13.36□□□□□ -0.27
USB1-206ENST00000562534 PDZD9Q8IXQ8 264 aa13.36□□□□□ -0.27
USB1-206ENST00000562534 PNKDQ8N490 385 aa13.36□□□□□ -0.27
USB1-206ENST00000562534 SAMD12Q8N8I0 201 aa13.36□□□□□ -0.27
USB1-206ENST00000562534 OR11H6Q8NGC7 330 aa13.36□□□□□ -0.27
USB1-206ENST00000562534 OR52M1Q8NGK5 317 aa13.36□□□□□ -0.27
USB1-206ENST00000562534 RFESDQ8TAC1 157 aa13.36□□□□□ -0.27
USB1-206ENST00000562534 OCEL1Q9H607 264 aa13.36□□□□□ -0.27
USB1-206ENST00000562534 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.36□□□□□ -0.27
USB1-206ENST00000562534 COMMD3Q9UBI1 195 aa13.36□□□□□ -0.27
USB1-206ENST00000562534 KCNK7Q9Y2U2 307 aa13.36□□□□□ -0.27
USB1-206ENST00000562534 A0A087X0M5 115 aa13.35□□□□□ -0.27
USB1-206ENST00000562534 A0A1B0GX30 115 aa13.35□□□□□ -0.27
USB1-206ENST00000562534 H3BMQ9 156 aa13.35□□□□□ -0.27
USB1-206ENST00000562534 C15orf65H3BRN8 121 aa13.35□□□□□ -0.27
USB1-206ENST00000562534 MFNGO00587 321 aa13.35□□□□□ -0.27
USB1-206ENST00000562534 NPFFO15130 113 aa13.35□□□□□ -0.27
USB1-206ENST00000562534 MMP23AO75900 390 aa13.35□□□□□ -0.27
USB1-206ENST00000562534 GSTP1P09211 210 aaKnown RBP13.35□□□□□ -0.27
USB1-206ENST00000562534 OMGP23515 440 aa13.35□□□□□ -0.27
USB1-206ENST00000562534 TALDO1P37837 337 aa13.35□□□□□ -0.27
USB1-206ENST00000562534 PRRX1P54821 245 aa13.35□□□□□ -0.27
USB1-206ENST00000562534 PITPNAQ00169 270 aa13.35□□□□□ -0.27
USB1-206ENST00000562534 ARFRP1Q13795 201 aa13.35□□□□□ -0.27
USB1-206ENST00000562534 TMEM30BQ3MIR4 351 aa13.35□□□□□ -0.27
USB1-206ENST00000562534 KIAA2026Q5HYC2 2103 aa13.35□□□□□ -0.27
USB1-206ENST00000562534 PRAMEF5Q5TYX0 476 aa13.35□□□□□ -0.27
USB1-206ENST00000562534 ZNF880Q6PDB4 577 aa13.35□□□□□ -0.27
USB1-206ENST00000562534 RBMS3Q6XE24 437 aaKnown RBP13.35□□□□□ -0.27
USB1-206ENST00000562534 ABHD12Q8N2K0 398 aa13.35□□□□□ -0.27
USB1-206ENST00000562534 ZNF418Q8TF45 676 aaPredicted RBP13.35□□□□□ -0.27
USB1-206ENST00000562534 SLC25A38Q96DW6 304 aa13.35□□□□□ -0.27
USB1-206ENST00000562534 KIRREL1Q96J84 757 aa13.35□□□□□ -0.27
USB1-206ENST00000562534 SUCNR1Q9BXA5 334 aa13.35□□□□□ -0.27
USB1-206ENST00000562534 CLEC7AQ9BXN2 247 aa13.35□□□□□ -0.27
USB1-206ENST00000562534 TAF9BQ9HBM6 251 aa13.35□□□□□ -0.27
USB1-206ENST00000562534 C12orf4Q9NQ89 552 aa13.35□□□□□ -0.27
USB1-206ENST00000562534 FAM96BQ9Y3D0 163 aa13.35□□□□□ -0.27
USB1-206ENST00000562534 NAV3Q8IVL0 2385 aa13.35□□□□□ -0.27
USB1-206ENST00000562534 NSD1Q96L73 2696 aaPredicted RBP13.35□□□□□ -0.27
USB1-206ENST00000562534 A0A075B6Q4 140 aa13.34□□□□□ -0.27
USB1-206ENST00000562534 A0A0A6YYJ9 748 aa13.34□□□□□ -0.27
USB1-206ENST00000562534 SMIM31A0A1B0GVY4 71 aa13.34□□□□□ -0.27
USB1-206ENST00000562534 C12orf77C9JDV5 145 aa13.34□□□□□ -0.27
USB1-206ENST00000562534 APOA1P02647 267 aa13.34□□□□□ -0.27
USB1-206ENST00000562534 COX7A1P24310 79 aa13.34□□□□□ -0.27
USB1-206ENST00000562534 NFYBP25208 207 aa13.34□□□□□ -0.27
USB1-206ENST00000562534 CD34P28906 385 aa13.34□□□□□ -0.27
USB1-206ENST00000562534 SSTR5P35346 364 aa13.34□□□□□ -0.27
USB1-206ENST00000562534 PRB3Q04118 309 aaPredicted RBP13.34□□□□□ -0.27
USB1-206ENST00000562534 KLRD1Q13241 179 aa13.34□□□□□ -0.27
USB1-206ENST00000562534 PNLIPRP3Q17RR3 467 aa13.34□□□□□ -0.27
USB1-206ENST00000562534 ZNF260Q3ZCT1 412 aa13.34□□□□□ -0.27
USB1-206ENST00000562534 HACD4Q5VWC8 232 aa13.34□□□□□ -0.27
USB1-206ENST00000562534 MOB1BQ7L9L4 216 aa13.34□□□□□ -0.27
USB1-206ENST00000562534 BCL6BQ8N143 479 aaPredicted RBP13.34□□□□□ -0.27
USB1-206ENST00000562534 PIP4P2Q8N4L2 257 aa13.34□□□□□ -0.27
USB1-206ENST00000562534 ZNF596Q8TC21 504 aa13.34□□□□□ -0.27
USB1-206ENST00000562534 DYNC2LI1Q8TCX1 351 aa13.34□□□□□ -0.27
USB1-206ENST00000562534 C22orf15Q8WYQ4 148 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms