RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 MOGAT2Q3SYC2 334 aa10.92□□□□□ -0.66
CDH1-204ENST00000562118 Q3ZCU0 254 aa10.92□□□□□ -0.66
CDH1-204ENST00000562118 GPR141Q7Z602 305 aa10.92□□□□□ -0.66
CDH1-204ENST00000562118 OR52M1Q8NGK5 317 aa10.92□□□□□ -0.66
CDH1-204ENST00000562118 ZNF596Q8TC21 504 aa10.92□□□□□ -0.66
CDH1-204ENST00000562118 LGALS14Q8TCE9 139 aa10.92□□□□□ -0.66
CDH1-204ENST00000562118 NEDD4LQ96PU5 975 aa10.92□□□□□ -0.66
CDH1-204ENST00000562118 PECRQ9BY49 303 aa10.92□□□□□ -0.66
CDH1-204ENST00000562118 ESM1Q9NQ30 184 aa10.92□□□□□ -0.66
CDH1-204ENST00000562118 DAPK2Q9UIK4 370 aa10.92□□□□□ -0.66
CDH1-204ENST00000562118 SPATA2Q9UM82 520 aa10.92□□□□□ -0.66
CDH1-204ENST00000562118 SOX21Q9Y651 276 aaPredicted RBP10.92□□□□□ -0.66
CDH1-204ENST00000562118 IGHV3OR16-10A0A075B7F0 116 aa10.91□□□□□ -0.66
CDH1-204ENST00000562118 A0A0A6YYH2 397 aa10.91□□□□□ -0.66
CDH1-204ENST00000562118 IGHV2-26A0A0B4J1V2 119 aa10.91□□□□□ -0.66
CDH1-204ENST00000562118 MEX3AA1L020 520 aaKnown RBP10.91□□□□□ -0.66
CDH1-204ENST00000562118 A6NJ64 397 aa10.91□□□□□ -0.66
CDH1-204ENST00000562118 PAHP00439 452 aa10.91□□□□□ -0.66
CDH1-204ENST00000562118 SNRPBP14678 240 aaKnown RBP10.91□□□□□ -0.66
CDH1-204ENST00000562118 CDK2P24941 298 aa10.91□□□□□ -0.66
CDH1-204ENST00000562118 SSTR5P35346 364 aa10.91□□□□□ -0.66
CDH1-204ENST00000562118 SAA4P35542 130 aa10.91□□□□□ -0.66
CDH1-204ENST00000562118 GLP1RP43220 463 aa10.91□□□□□ -0.66
CDH1-204ENST00000562118 LOXL3P58215 753 aa10.91□□□□□ -0.66
CDH1-204ENST00000562118 VBP1P61758 197 aa10.91□□□□□ -0.66
CDH1-204ENST00000562118 MXD1Q05195 221 aa10.91□□□□□ -0.66
CDH1-204ENST00000562118 LDLRAD2Q5SZI1 272 aa10.91□□□□□ -0.66
CDH1-204ENST00000562118 OR52W1Q6IF63 320 aa10.91□□□□□ -0.66
CDH1-204ENST00000562118 TRAT1Q6PIZ9 186 aa10.91□□□□□ -0.66
CDH1-204ENST00000562118 Q6YL49 198 aa10.91□□□□□ -0.66
CDH1-204ENST00000562118 ZDHHC22Q8N966 263 aa10.91□□□□□ -0.66
CDH1-204ENST00000562118 C8orf31Q8N9H6 132 aa10.91□□□□□ -0.66
CDH1-204ENST00000562118 BEND2Q8NDZ0 799 aa10.91□□□□□ -0.66
CDH1-204ENST00000562118 OR13D1Q8NGV5 346 aa10.91□□□□□ -0.66
CDH1-204ENST00000562118 OR10R2Q8NGX6 335 aa10.91□□□□□ -0.66
CDH1-204ENST00000562118 MRGPRDQ8TDS7 321 aa10.91□□□□□ -0.66
CDH1-204ENST00000562118 ZFAND2BQ8WV99 257 aa10.91□□□□□ -0.66
CDH1-204ENST00000562118 KCTD12Q96CX2 325 aaKnown RBP10.91□□□□□ -0.66
CDH1-204ENST00000562118 ARHGAP5-AS1Q96IT6 56 aa10.91□□□□□ -0.66
CDH1-204ENST00000562118 FAAP24Q9BTP7 215 aa10.91□□□□□ -0.66
CDH1-204ENST00000562118 MS4A7Q9GZW8 240 aaPredicted RBP10.91□□□□□ -0.66
CDH1-204ENST00000562118 RIMS4Q9H426 269 aaPredicted RBP10.91□□□□□ -0.66
CDH1-204ENST00000562118 ABRACLQ9P1F3 81 aa10.91□□□□□ -0.66
CDH1-204ENST00000562118 TBL2Q9Y4P3 447 aaKnown RBP10.91□□□□□ -0.66
CDH1-204ENST00000562118 A0A0U1RQK1 487 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 C12orf77C9JDV5 145 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 TCF21O43680 179 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 HIST1H1DP16402 221 aaKnown RBP10.9□□□□□ -0.66
CDH1-204ENST00000562118 VEGFCP49767 419 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 TMBIM6P55061 237 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 LSM3P62310 102 aaKnown RBP10.9□□□□□ -0.66
CDH1-204ENST00000562118 PRB3Q04118 309 aaPredicted RBP10.9□□□□□ -0.66
CDH1-204ENST00000562118 HMGN3Q15651 99 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 AANATQ16613 207 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 DEFB112Q30KQ8 113 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 LY6G6FQ5SQ64 297 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 UTF1Q5T230 341 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 C6orf183Q5T699 404 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 PRAMEF5Q5TYX0 476 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 GPR107Q5VW38 600 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 BAIAP2L2Q6UXY1 529 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 ZNF782Q6ZMW2 699 aaPredicted RBP10.9□□□□□ -0.66
CDH1-204ENST00000562118 MOB1BQ7L9L4 216 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 TRAPPC6BQ86SZ2 158 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 PNKDQ8N490 385 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 TMEM86BQ8N661 226 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 SIGLECL1Q8N7X8 197 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 OR4P4Q8NGL7 312 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 OR5H6Q8NGV6 325 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 ZNF418Q8TF45 676 aaPredicted RBP10.9□□□□□ -0.66
CDH1-204ENST00000562118 CLEC7AQ9BXN2 247 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 RBM38Q9H0Z9 239 aaKnown RBP10.9□□□□□ -0.66
CDH1-204ENST00000562118 MEGF9Q9H1U4 602 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 ABCG5Q9H222 651 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 ZMAT3Q9HA38 289 aaKnown RBP10.9□□□□□ -0.66
CDH1-204ENST00000562118 IDI2-AS1Q9NZ38 188 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 ZNRD1Q9P1U0 126 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 AK3Q9UIJ7 227 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 COL6A5A8TX70 2615 aa10.9□□□□□ -0.66
CDH1-204ENST00000562118 UBE2QL1A1L167 161 aa10.89□□□□□ -0.67
CDH1-204ENST00000562118 METTL21EPA6NDL7 271 aa10.89□□□□□ -0.67
CDH1-204ENST00000562118 SERPINE3A8MV23 424 aa10.89□□□□□ -0.67
CDH1-204ENST00000562118 VGLL3A8MV65 326 aa10.89□□□□□ -0.67
CDH1-204ENST00000562118 LY6LH3BQJ8 138 aa10.89□□□□□ -0.67
CDH1-204ENST00000562118 SCGNO76038 276 aa10.89□□□□□ -0.67
CDH1-204ENST00000562118 VENTXO95231 258 aa10.89□□□□□ -0.67
CDH1-204ENST00000562118 RCC1P18754 421 aaPredicted RBP10.89□□□□□ -0.67
CDH1-204ENST00000562118 HTD2P86397 168 aa10.89□□□□□ -0.67
CDH1-204ENST00000562118 SRSF7Q16629 238 aaKnown RBP eCLIP10.89□□□□□ -0.67
CDH1-204ENST00000562118 NKAPLQ5M9Q1 402 aa10.89□□□□□ -0.67
CDH1-204ENST00000562118 MINOS1Q5TGZ0 78 aa10.89□□□□□ -0.67
CDH1-204ENST00000562118 Q6ZS49 121 aa10.89□□□□□ -0.67
CDH1-204ENST00000562118 Q6ZTK2 550 aa10.89□□□□□ -0.67
CDH1-204ENST00000562118 LINC00311Q8N616 119 aa10.89□□□□□ -0.67
CDH1-204ENST00000562118 RAB2BQ8WUD1 216 aa10.89□□□□□ -0.67
CDH1-204ENST00000562118 C22orf15Q8WYQ4 148 aa10.89□□□□□ -0.67
CDH1-204ENST00000562118 CMTM3Q96MX0 182 aa10.89□□□□□ -0.67
CDH1-204ENST00000562118 ZNF286AQ9HBT8 521 aa10.89□□□□□ -0.67
CDH1-204ENST00000562118 PLEKHJ1Q9NW61 149 aa10.89□□□□□ -0.67
CDH1-204ENST00000562118 RHBDL2Q9NX52 303 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms