RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 SPSB1Q96BD6 273 aa9.06□□□□□ -0.96
NSMCE1-202ENST00000561960 CIB1Q99828 191 aa9.06□□□□□ -0.96
NSMCE1-202ENST00000561960 PRRG3Q9BZD7 231 aa9.06□□□□□ -0.96
NSMCE1-202ENST00000561960 ZMAT4Q9H898 229 aa9.06□□□□□ -0.96
NSMCE1-202ENST00000561960 RETNQ9HD89 108 aa9.06□□□□□ -0.96
NSMCE1-202ENST00000561960 KIAA1456Q9P272 454 aa9.06□□□□□ -0.96
NSMCE1-202ENST00000561960 WARS2Q9UGM6 360 aaKnown RBP9.06□□□□□ -0.96
NSMCE1-202ENST00000561960 A3GALT2U3KPV4 340 aa9.06□□□□□ -0.96
NSMCE1-202ENST00000561960 I3L521 148 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 GABRPO00591 440 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 OVOL1O14753 267 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 ATP6V0E1O15342 81 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 MPZL2O60487 215 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 SULT1C4O75897 302 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 FAM107AO95990 144 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 MOSP00540 346 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 IGHV3-11P01762 117 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 IGHG4P01861 327 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 ELANEP08246 267 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 CALB2P22676 271 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 SOX6P35712 828 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 ISL1P61371 349 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 ZNF616Q08AN1 781 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 ZNF816Q0VGE8 651 aaPredicted RBP9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 KIAA0141Q14154 515 aaPredicted RBP9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 DOC2BQ14184 412 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 ECSCRQ19T08 205 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 ZNF691Q5VV52 312 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 TMEM244Q5VVB8 128 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 TMEM65Q6PI78 240 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 IZUMO1Q8IYV9 350 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 ZNF491Q8N8L2 437 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 CHST4Q8NCG5 386 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 TMEM104Q8NE00 496 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 TNFAIP8L1Q8WVP5 186 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 ARL11Q969Q4 196 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 ORAI1Q96D31 301 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 C4orf36Q96KX1 117 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 MBOAT4Q96T53 435 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 GPER1Q99527 375 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 DPCDQ9BVM2 203 aaPredicted RBP9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 ZCCHC4Q9H5U6 513 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 ISG20L2Q9H9L3 353 aaKnown RBP9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 FAM118AQ9NWS6 357 aa9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 ZNF107Q9UII5 783 aaPredicted RBP9.05□□□□□ -0.96
NSMCE1-202ENST00000561960 IGHV4OR15-8A0A075B7B6 117 aa9.04□□□□□ -0.96
NSMCE1-202ENST00000561960 A0A087WW49 117 aa9.04□□□□□ -0.96
NSMCE1-202ENST00000561960 A0A1W2PP11 408 aa9.04□□□□□ -0.96
NSMCE1-202ENST00000561960 TCRBV3S1A0A5B6 114 aa9.04□□□□□ -0.96
NSMCE1-202ENST00000561960 DAPL1A0PJW8 107 aa9.04□□□□□ -0.96
NSMCE1-202ENST00000561960 NPIPB11E5RHQ5 1161 aa9.04□□□□□ -0.96
NSMCE1-202ENST00000561960 E9PI62 339 aa9.04□□□□□ -0.96
NSMCE1-202ENST00000561960 G3V2T6 193 aa9.04□□□□□ -0.96
NSMCE1-202ENST00000561960 OR8U8P0C7N1 319 aa9.04□□□□□ -0.96
NSMCE1-202ENST00000561960 SOX2P48431 317 aa9.04□□□□□ -0.96
NSMCE1-202ENST00000561960 EBI3Q14213 229 aa9.04□□□□□ -0.96
NSMCE1-202ENST00000561960 RSU1Q15404 277 aa9.04□□□□□ -0.96
NSMCE1-202ENST00000561960 MMDQ15546 238 aa9.04□□□□□ -0.96
NSMCE1-202ENST00000561960 FAM71E2Q8N5Q1 922 aa9.04□□□□□ -0.96
NSMCE1-202ENST00000561960 RNF152Q8N8N0 203 aa9.04□□□□□ -0.96
NSMCE1-202ENST00000561960 NEK7Q8TDX7 302 aa9.04□□□□□ -0.96
NSMCE1-202ENST00000561960 TSEN15Q8WW01 171 aaKnown RBP9.04□□□□□ -0.96
NSMCE1-202ENST00000561960 C10orf35Q96D05 121 aa9.04□□□□□ -0.96
NSMCE1-202ENST00000561960 CITED4Q96RK1 184 aa9.04□□□□□ -0.96
NSMCE1-202ENST00000561960 PDCD1LG2Q9BQ51 273 aa9.04□□□□□ -0.96
NSMCE1-202ENST00000561960 FAM110AQ9BQ89 295 aa9.04□□□□□ -0.96
NSMCE1-202ENST00000561960 RSRP1Q9BUV0 290 aa9.04□□□□□ -0.96
NSMCE1-202ENST00000561960 BARHL1Q9BZE3 327 aa9.04□□□□□ -0.96
NSMCE1-202ENST00000561960 TAS2R4Q9NYW5 299 aa9.04□□□□□ -0.96
NSMCE1-202ENST00000561960 OR4C45A6NMZ5 311 aa9.03□□□□□ -0.96
NSMCE1-202ENST00000561960 C15orf65H3BRN8 121 aa9.03□□□□□ -0.96
NSMCE1-202ENST00000561960 SULT1B1O43704 296 aa9.03□□□□□ -0.96
NSMCE1-202ENST00000561960 OR7C1O76099 320 aaPredicted RBP9.03□□□□□ -0.96
NSMCE1-202ENST00000561960 IGHV4-30-4P0DP06 118 aa9.03□□□□□ -0.96
NSMCE1-202ENST00000561960 BLVRBP30043 206 aaPredicted RBP9.03□□□□□ -0.96
NSMCE1-202ENST00000561960 MTNR1BP49286 362 aa9.03□□□□□ -0.96
NSMCE1-202ENST00000561960 ZNF134P52741 427 aa9.03□□□□□ -0.96
NSMCE1-202ENST00000561960 GNMTQ14749 295 aa9.03□□□□□ -0.96
NSMCE1-202ENST00000561960 ATAD3CQ5T2N8 411 aa9.03□□□□□ -0.96
NSMCE1-202ENST00000561960 KDM4DQ6B0I6 523 aa9.03□□□□□ -0.96
NSMCE1-202ENST00000561960 LHFPL3Q86UP9 236 aa9.03□□□□□ -0.96
NSMCE1-202ENST00000561960 SAXO1Q8IYX7 474 aa9.03□□□□□ -0.96
NSMCE1-202ENST00000561960 OR1L1Q8NH94 360 aa9.03□□□□□ -0.96
NSMCE1-202ENST00000561960 PELI1Q96FA3 418 aa9.03□□□□□ -0.96
NSMCE1-202ENST00000561960 GON7Q9BXV9 100 aa9.03□□□□□ -0.96
NSMCE1-202ENST00000561960 ING4Q9UNL4 249 aa9.03□□□□□ -0.96
NSMCE1-202ENST00000561960 POMPQ9Y244 141 aa9.03□□□□□ -0.96
NSMCE1-202ENST00000561960 FBXO7Q9Y3I1 522 aa9.03□□□□□ -0.96
NSMCE1-202ENST00000561960 SAC3D1A6NKF1 404 aa9.02□□□□□ -0.97
NSMCE1-202ENST00000561960 GEMIN2O14893 280 aaKnown RBP9.02□□□□□ -0.97
NSMCE1-202ENST00000561960 SLC16A6O15403 523 aa9.02□□□□□ -0.97
NSMCE1-202ENST00000561960 SERPINA2P20848 420 aa9.02□□□□□ -0.97
NSMCE1-202ENST00000561960 NDPQ00604 133 aa9.02□□□□□ -0.97
NSMCE1-202ENST00000561960 DEFA5Q01523 94 aa9.02□□□□□ -0.97
NSMCE1-202ENST00000561960 ALKBH1Q13686 389 aaKnown RBP9.02□□□□□ -0.97
NSMCE1-202ENST00000561960 CCDC54Q8NEL0 328 aa9.02□□□□□ -0.97
NSMCE1-202ENST00000561960 OR4K15Q8NH41 348 aa9.02□□□□□ -0.97
NSMCE1-202ENST00000561960 DNAJC9Q8WXX5 260 aa9.02□□□□□ -0.97
NSMCE1-202ENST00000561960 ISOC1Q96CN7 298 aa9.02□□□□□ -0.97
NSMCE1-202ENST00000561960 MS4A10Q96PG2 267 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms