RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 EDDM3BP56851 147 aa8.59□□□□□ -1.03
USP3-219ENST00000561326 HERV-K104P61576 105 aa8.59□□□□□ -1.03
USP3-219ENST00000561326 SURF2Q15527 256 aaPredicted RBP8.59□□□□□ -1.03
USP3-219ENST00000561326 LPCAT3Q6P1A2 487 aa8.59□□□□□ -1.03
USP3-219ENST00000561326 GLCCI1Q86VQ1 547 aa8.59□□□□□ -1.03
USP3-219ENST00000561326 ZFAND1Q8TCF1 268 aa8.59□□□□□ -1.03
USP3-219ENST00000561326 UPRTQ96BW1 309 aa8.59□□□□□ -1.03
USP3-219ENST00000561326 COQ2Q96H96 371 aa8.59□□□□□ -1.03
USP3-219ENST00000561326 CYYR1Q96J86 154 aa8.59□□□□□ -1.03
USP3-219ENST00000561326 CCL19Q99731 98 aa8.59□□□□□ -1.03
USP3-219ENST00000561326 TMEM246Q9BRR3 403 aa8.59□□□□□ -1.03
USP3-219ENST00000561326 ZNF2Q9BSG1 426 aaPredicted RBP8.59□□□□□ -1.03
USP3-219ENST00000561326 ALX4Q9H161 411 aaPredicted RBP8.59□□□□□ -1.03
USP3-219ENST00000561326 TAF9BQ9HBM6 251 aa8.59□□□□□ -1.03
USP3-219ENST00000561326 GPN1Q9HCN4 374 aaPredicted RBP8.59□□□□□ -1.03
USP3-219ENST00000561326 SLC25A10Q9UBX3 287 aaPredicted RBP8.59□□□□□ -1.03
USP3-219ENST00000561326 LPAR3Q9UBY5 353 aa8.59□□□□□ -1.03
USP3-219ENST00000561326 MIOXQ9UGB7 285 aa8.59□□□□□ -1.03
USP3-219ENST00000561326 SLC23A1Q9UHI7 598 aa8.59□□□□□ -1.03
USP3-219ENST00000561326 DOPEY2Q9Y3R5 2298 aa8.59□□□□□ -1.03
USP3-219ENST00000561326 TRGV10A0A0A0MS01 117 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 hADV38S2A0JD32 116 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 TNFRSF13BO14836 293 aaPredicted RBP8.58□□□□□ -1.04
USP3-219ENST00000561326 GPR37O15354 613 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 HSPA12AO43301 675 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 TFF1P04155 84 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 IL5P05113 134 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 PGAM2P15259 253 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 NDUFB7P17568 137 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 ZBTB25P24278 435 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 RBMXP38159 391 aaKnown RBP8.58□□□□□ -1.04
USP3-219ENST00000561326 NPY4RP50391 375 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 BCAP31P51572 246 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 MECP2P51608 486 aaKnown RBP8.58□□□□□ -1.04
USP3-219ENST00000561326 RAB25P57735 213 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 TAS2R31P59538 309 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 MEF2CQ06413 473 aaPredicted RBP8.58□□□□□ -1.04
USP3-219ENST00000561326 HMGN3Q15651 99 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 TATDN3Q17R31 274 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 CR1LQ2VPA4 569 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 TMEM155Q4W5P6 130 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 IGSF11Q5DX21 431 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 METTL11BQ5VVY1 283 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 C11orf88Q6PI97 169 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 NLRC3Q7RTR2 1065 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 LHFPL1Q86WI0 220 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 PRR18Q8N4B5 295 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 SPICQ8N5J4 248 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 FAM216BQ8N7L0 139 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 OR13C8Q8NGS7 320 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 IL1F10Q8WWZ1 152 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 NINJ1Q92982 152 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 DACT3Q96B18 629 aaPredicted RBP8.58□□□□□ -1.04
USP3-219ENST00000561326 C14orf79Q96F83 325 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 C14orf166Q9Y224 244 aaKnown RBP8.58□□□□□ -1.04
USP3-219ENST00000561326 COL12A1Q99715 3063 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 CRYBG3Q68DQ2 2970 aa8.58□□□□□ -1.04
USP3-219ENST00000561326 MALRD1Q5VYJ5 2156 aa8.57□□□□□ -1.04
USP3-219ENST00000561326 TRBV6-7A0A0A0MS04 114 aa8.57□□□□□ -1.04
USP3-219ENST00000561326 TRAV39A0A0B4J263 110 aa8.57□□□□□ -1.04
USP3-219ENST00000561326 FAM172BPA6NC97 362 aa8.57□□□□□ -1.04
USP3-219ENST00000561326 CEACAM18A8MTB9 384 aa8.57□□□□□ -1.04
USP3-219ENST00000561326 NPIPB11E5RHQ5 1161 aa8.57□□□□□ -1.04
USP3-219ENST00000561326 PFDN1O60925 122 aa8.57□□□□□ -1.04
USP3-219ENST00000561326 IGHV2-70P01814 119 aa8.57□□□□□ -1.04
USP3-219ENST00000561326 FPR2P25090 351 aa8.57□□□□□ -1.04
USP3-219ENST00000561326 SSTR2P30874 369 aa8.57□□□□□ -1.04
USP3-219ENST00000561326 UCP3P55916 312 aa8.57□□□□□ -1.04
USP3-219ENST00000561326 UBE2MP61081 183 aaKnown RBP8.57□□□□□ -1.04
USP3-219ENST00000561326 CARTPTQ16568 116 aa8.57□□□□□ -1.04
USP3-219ENST00000561326 FAHD2BQ6P2I3 314 aaPredicted RBP8.57□□□□□ -1.04
USP3-219ENST00000561326 Q6ZPA2 131 aa8.57□□□□□ -1.04
USP3-219ENST00000561326 MARCH1Q8TCQ1 289 aa8.57□□□□□ -1.04
USP3-219ENST00000561326 MRGPRDQ8TDS7 321 aa8.57□□□□□ -1.04
USP3-219ENST00000561326 CORO2AQ92828 525 aa8.57□□□□□ -1.04
USP3-219ENST00000561326 ARL11Q969Q4 196 aa8.57□□□□□ -1.04
USP3-219ENST00000561326 FAHD2AQ96GK7 314 aa8.57□□□□□ -1.04
USP3-219ENST00000561326 KIRREL1Q96J84 757 aa8.57□□□□□ -1.04
USP3-219ENST00000561326 CABLES2Q9BTV7 478 aa8.57□□□□□ -1.04
USP3-219ENST00000561326 BARX1Q9HBU1 254 aaPredicted RBP8.57□□□□□ -1.04
USP3-219ENST00000561326 ZNF69Q9UC07 566 aa8.57□□□□□ -1.04
USP3-219ENST00000561326 GPR132Q9UNW8 380 aa8.57□□□□□ -1.04
USP3-219ENST00000561326 FLVCR2Q9UPI3 526 aa8.57□□□□□ -1.04
USP3-219ENST00000561326 USP9YO00507 2555 aaPredicted RBP8.57□□□□□ -1.04
USP3-219ENST00000561326 ZNF729A6NN14 1252 aaPredicted RBP8.56□□□□□ -1.04
USP3-219ENST00000561326 SNRPGP15A8MWD9 76 aa8.56□□□□□ -1.04
USP3-219ENST00000561326 C12orf77C9JDV5 145 aa8.56□□□□□ -1.04
USP3-219ENST00000561326 DVL1O14640 695 aa8.56□□□□□ -1.04
USP3-219ENST00000561326 LY6HO94772 140 aa8.56□□□□□ -1.04
USP3-219ENST00000561326 PPYP01298 95 aa8.56□□□□□ -1.04
USP3-219ENST00000561326 HBZP02008 142 aa8.56□□□□□ -1.04
USP3-219ENST00000561326 HEXAP06865 529 aa8.56□□□□□ -1.04
USP3-219ENST00000561326 ZNF728P0DKX0 622 aa8.56□□□□□ -1.04
USP3-219ENST00000561326 RPS2P15880 293 aaKnown RBP8.56□□□□□ -1.04
USP3-219ENST00000561326 NFYAP23511 347 aaPredicted RBP8.56□□□□□ -1.04
USP3-219ENST00000561326 S100GP29377 79 aa8.56□□□□□ -1.04
USP3-219ENST00000561326 CEACAM6P40199 344 aa8.56□□□□□ -1.04
USP3-219ENST00000561326 GPR6P46095 362 aaPredicted RBP8.56□□□□□ -1.04
USP3-219ENST00000561326 RPL31P62899 125 aaKnown RBP8.56□□□□□ -1.04
USP3-219ENST00000561326 HTD2P86397 168 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms