RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 SSTR5P35346 364 aa14.37□□□□□ -0.11
TPM1-226ENST00000560959 CCR9P51686 369 aa14.37□□□□□ -0.11
TPM1-226ENST00000560959 IL13RA2Q14627 380 aa14.37□□□□□ -0.11
TPM1-226ENST00000560959 ADAMTSL5Q6ZMM2 481 aa14.37□□□□□ -0.11
TPM1-226ENST00000560959 OR10H4Q8NGA5 316 aa14.37□□□□□ -0.11
TPM1-226ENST00000560959 CCDC124Q96CT7 223 aaKnown RBP14.37□□□□□ -0.11
TPM1-226ENST00000560959 KLK15Q9H2R5 256 aa14.37□□□□□ -0.11
TPM1-226ENST00000560959 OR51J1Q9H342 316 aa14.37□□□□□ -0.11
TPM1-226ENST00000560959 FAM118AQ9NWS6 357 aa14.37□□□□□ -0.11
TPM1-226ENST00000560959 FRRS1LQ9P0K9 344 aa14.37□□□□□ -0.11
TPM1-226ENST00000560959 GNG8Q9UK08 70 aa14.37□□□□□ -0.11
TPM1-226ENST00000560959 FAM90A10PA6NDY2 464 aa14.36□□□□□ -0.11
TPM1-226ENST00000560959 HSPB6O14558 160 aa14.36□□□□□ -0.11
TPM1-226ENST00000560959 F2RL1P55085 397 aa14.36□□□□□ -0.11
TPM1-226ENST00000560959 GNB1P62873 340 aa14.36□□□□□ -0.11
TPM1-226ENST00000560959 KISS1Q15726 138 aa14.36□□□□□ -0.11
TPM1-226ENST00000560959 PXT1Q8NFP0 134 aa14.36□□□□□ -0.11
TPM1-226ENST00000560959 OR13C9Q8NGT0 318 aa14.36□□□□□ -0.11
TPM1-226ENST00000560959 UTP4Q969X6 686 aaKnown RBP14.36□□□□□ -0.11
TPM1-226ENST00000560959 ZCCHC4Q9H5U6 513 aa14.36□□□□□ -0.11
TPM1-226ENST00000560959 TRIM64CA6NLI5 447 aa14.35□□□□□ -0.11
TPM1-226ENST00000560959 FKBP6O75344 327 aa14.35□□□□□ -0.11
TPM1-226ENST00000560959 EPHA2P29317 976 aa14.35□□□□□ -0.11
TPM1-226ENST00000560959 ATP6V1E1P36543 226 aa14.35□□□□□ -0.11
TPM1-226ENST00000560959 RAB9AP51151 201 aa14.35□□□□□ -0.11
TPM1-226ENST00000560959 ACSM6Q6P461 480 aa14.35□□□□□ -0.11
TPM1-226ENST00000560959 LYPD6Q86Y78 171 aa14.35□□□□□ -0.11
TPM1-226ENST00000560959 PLPPR1Q8TBJ4 325 aa14.35□□□□□ -0.11
TPM1-226ENST00000560959 DLX4Q92988 240 aaPredicted RBP14.35□□□□□ -0.11
TPM1-226ENST00000560959 ZNF107Q9UII5 783 aaPredicted RBP14.35□□□□□ -0.11
TPM1-226ENST00000560959 MAGEA13PA6NCF6 341 aa14.34□□□□□ -0.11
TPM1-226ENST00000560959 JTBO76095 146 aa14.34□□□□□ -0.11
TPM1-226ENST00000560959 RPSAP08865 295 aaKnown RBP14.34□□□□□ -0.11
TPM1-226ENST00000560959 CALB2P22676 271 aa14.34□□□□□ -0.11
TPM1-226ENST00000560959 ZNF137PP52743 207 aa14.34□□□□□ -0.11
TPM1-226ENST00000560959 ZNF85Q03923 595 aa14.34□□□□□ -0.11
TPM1-226ENST00000560959 TP53I3Q53FA7 332 aa14.34□□□□□ -0.11
TPM1-226ENST00000560959 OR5D14Q8NGL3 314 aa14.34□□□□□ -0.11
TPM1-226ENST00000560959 OR13C3Q8NGS6 347 aa14.34□□□□□ -0.11
TPM1-226ENST00000560959 NR1H4Q96RI1 486 aaPredicted RBP14.34□□□□□ -0.11
TPM1-226ENST00000560959 KRTAP17-1Q9BYP8 105 aa14.34□□□□□ -0.11
TPM1-226ENST00000560959 IFT22Q9H7X7 185 aa14.34□□□□□ -0.11
TPM1-226ENST00000560959 C19orf73Q9NVV2 129 aa14.34□□□□□ -0.11
TPM1-226ENST00000560959 ZNF736B4DX44 427 aaPredicted RBP14.33□□□□□ -0.12
TPM1-226ENST00000560959 C15orf65H3BRN8 121 aa14.33□□□□□ -0.12
TPM1-226ENST00000560959 ORC5O43913 435 aa14.33□□□□□ -0.12
TPM1-226ENST00000560959 OR8U9P0C7N5 309 aa14.33□□□□□ -0.12
TPM1-226ENST00000560959 IGHV4-30-4P0DP06 118 aa14.33□□□□□ -0.12
TPM1-226ENST00000560959 NANOS3P60323 173 aaKnown RBP14.33□□□□□ -0.12
TPM1-226ENST00000560959 GABPB1Q06547 395 aaPredicted RBP14.33□□□□□ -0.12
TPM1-226ENST00000560959 ZNF691Q5VV52 312 aa14.33□□□□□ -0.12
TPM1-226ENST00000560959 SERPINA12Q8IW75 414 aa14.33□□□□□ -0.12
TPM1-226ENST00000560959 OR51A4Q8NGJ6 313 aa14.33□□□□□ -0.12
TPM1-226ENST00000560959 GFOD1Q9NXC2 390 aa14.33□□□□□ -0.12
TPM1-226ENST00000560959 ENOPH1Q9UHY7 261 aa14.33□□□□□ -0.12
TPM1-226ENST00000560959 LINC01619G3V211 115 aa14.32□□□□□ -0.12
TPM1-226ENST00000560959 SDCBPO00560 298 aaPredicted RBP14.32□□□□□ -0.12
TPM1-226ENST00000560959 SULT1B1O43704 296 aa14.32□□□□□ -0.12
TPM1-226ENST00000560959 VHLP40337 213 aa14.32□□□□□ -0.12
TPM1-226ENST00000560959 FAM53AQ6NSI3 398 aaPredicted RBP14.32□□□□□ -0.12
TPM1-226ENST00000560959 SLC25A48Q6ZT89 311 aaKnown RBP14.32□□□□□ -0.12
TPM1-226ENST00000560959 Q8N1Y9 231 aa14.32□□□□□ -0.12
TPM1-226ENST00000560959 MINDY2Q8NBR6 621 aa14.32□□□□□ -0.12
TPM1-226ENST00000560959 RFKQ969G6 155 aa14.32□□□□□ -0.12
TPM1-226ENST00000560959 CPNE2Q96FN4 548 aaPredicted RBP14.32□□□□□ -0.12
TPM1-226ENST00000560959 DPCDQ9BVM2 203 aaPredicted RBP14.32□□□□□ -0.12
TPM1-226ENST00000560959 MRPS28Q9Y2Q9 187 aaKnown RBP14.32□□□□□ -0.12
TPM1-226ENST00000560959 TCRBV3S1A0A5B6 114 aa14.31□□□□□ -0.12
TPM1-226ENST00000560959 MITFO75030 526 aaPredicted RBP14.31□□□□□ -0.12
TPM1-226ENST00000560959 HTR1AP08908 422 aa14.31□□□□□ -0.12
TPM1-226ENST00000560959 STEAP3Q658P3 488 aa14.31□□□□□ -0.12
TPM1-226ENST00000560959 KDM4DQ6B0I6 523 aa14.31□□□□□ -0.12
TPM1-226ENST00000560959 PARP16Q8N5Y8 322 aa14.31□□□□□ -0.12
TPM1-226ENST00000560959 OR8J1Q8NGP2 316 aa14.31□□□□□ -0.12
TPM1-226ENST00000560959 OR10AC1Q8NH08 325 aa14.31□□□□□ -0.12
TPM1-226ENST00000560959 ARL11Q969Q4 196 aa14.31□□□□□ -0.12
TPM1-226ENST00000560959 OR5B12Q96R08 314 aa14.31□□□□□ -0.12
TPM1-226ENST00000560959 SPATA25Q9BR10 227 aa14.31□□□□□ -0.12
TPM1-226ENST00000560959 TPSG1Q9NRR2 321 aa14.31□□□□□ -0.12
TPM1-226ENST00000560959 WSB1Q9Y6I7 421 aa14.31□□□□□ -0.12
TPM1-226ENST00000560959 TRAV39A0A0B4J263 110 aa14.3□□□□□ -0.12
TPM1-226ENST00000560959 TMEM30CPA0ZSE6 113 aa14.3□□□□□ -0.12
TPM1-226ENST00000560959 OR4C45A6NMZ5 311 aa14.3□□□□□ -0.12
TPM1-226ENST00000560959 G3V318 75 aa14.3□□□□□ -0.12
TPM1-226ENST00000560959 ARPC1BO15143 372 aaKnown RBP14.3□□□□□ -0.12
TPM1-226ENST00000560959 HLA-DRB1P01911 266 aa14.3□□□□□ -0.12
TPM1-226ENST00000560959 T-ENOLP0DO92 83 aa14.3□□□□□ -0.12
TPM1-226ENST00000560959 NHLRC3Q5JS37 347 aa14.3□□□□□ -0.12
TPM1-226ENST00000560959 ASCL4Q6XD76 172 aa14.3□□□□□ -0.12
TPM1-226ENST00000560959 SPATA24Q86W54 205 aa14.3□□□□□ -0.12
TPM1-226ENST00000560959 SUMF2Q8NBJ7 301 aa14.3□□□□□ -0.12
TPM1-226ENST00000560959 IL17DQ8TAD2 202 aa14.3□□□□□ -0.12
TPM1-226ENST00000560959 OR4C12Q96R67 309 aa14.3□□□□□ -0.12
TPM1-226ENST00000560959 THTPAQ9BU02 230 aa14.3□□□□□ -0.12
TPM1-226ENST00000560959 TOLLIPQ9H0E2 274 aa14.3□□□□□ -0.12
TPM1-226ENST00000560959 TRAV41A0A0B4J266 112 aa14.29□□□□□ -0.12
TPM1-226ENST00000560959 SLC16A6O15403 523 aa14.29□□□□□ -0.12
TPM1-226ENST00000560959 HSPA12AO43301 675 aa14.29□□□□□ -0.12
TPM1-226ENST00000560959 SRSF7Q16629 238 aaKnown RBP eCLIP14.29□□□□□ -0.12
TPM1-226ENST00000560959 TMEM30BQ3MIR4 351 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms