RNA–Protein interactions for RNA: ENST00000560637.5

VPS13C-209, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 1 (best)

Gene VPS13C, Length 3,684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-209ENST00000560637 RAB14P61106 215 aa4.61□□□□□ -1.67
VPS13C-209ENST00000560637 ACSM1Q08AH1 577 aa4.61□□□□□ -1.67
VPS13C-209ENST00000560637 CATR1Q13166 79 aa4.61□□□□□ -1.67
VPS13C-209ENST00000560637 UNC119Q13432 240 aa4.61□□□□□ -1.67
VPS13C-209ENST00000560637 KCNMB1Q16558 191 aa4.61□□□□□ -1.67
VPS13C-209ENST00000560637 HIST3H3Q16695 136 aa4.61□□□□□ -1.67
VPS13C-209ENST00000560637 IAH1Q2TAA2 248 aaPredicted RBP4.61□□□□□ -1.67
VPS13C-209ENST00000560637 TMEM268Q5VZI3 342 aa4.61□□□□□ -1.67
VPS13C-209ENST00000560637 STUMQ69YW2 141 aa4.61□□□□□ -1.67
VPS13C-209ENST00000560637 GSG1LQ6UXU4 331 aa4.61□□□□□ -1.67
VPS13C-209ENST00000560637 FGFRL1Q8N441 504 aa4.61□□□□□ -1.67
VPS13C-209ENST00000560637 MARVELD3Q96A59 401 aa4.61□□□□□ -1.67
VPS13C-209ENST00000560637 DHRS9Q9BPW9 319 aa4.61□□□□□ -1.67
VPS13C-209ENST00000560637 CCL28Q9NRJ3 127 aa4.61□□□□□ -1.67
VPS13C-209ENST00000560637 GHRLQ9UBU3 117 aa4.61□□□□□ -1.67
VPS13C-209ENST00000560637 PRELID3BQ9Y3B1 194 aa4.61□□□□□ -1.67
VPS13C-209ENST00000560637 ALG5Q9Y673 324 aa4.61□□□□□ -1.67
VPS13C-209ENST00000560637 TRBV5-7A0A0A0MS05 114 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 A0A1W2PPH5 198 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 OOEPA6NGQ2 149 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 F5H0A9 414 aaPredicted RBP4.6□□□□□ -1.67
VPS13C-209ENST00000560637 MLNRO43193 412 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 RGS11O94810 467 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 PF4P02776 101 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 ISG15P05161 165 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 IAPPP10997 89 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 PSG2P11465 335 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 ZBTB25P24278 435 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 CCKARP32238 428 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 FGF12P61328 243 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 SORDQ00796 357 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 MAB21L1Q13394 359 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 GNMTQ14749 295 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 FCN2Q15485 313 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 RSPO1Q2MKA7 263 aaPredicted RBP4.6□□□□□ -1.67
VPS13C-209ENST00000560637 C6orf183Q5T699 404 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 HACD4Q5VWC8 232 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 RNLSQ5VYX0 342 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 OR8G2PQ6IF36 304 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 CCDC190Q86UF4 302 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 GLYATL2Q8WU03 294 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 RSRP1Q9BUV0 290 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 BPESC1Q9GZL8 116 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 ARL6Q9H0F7 186 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 RANBP3Q9H6Z4 567 aaPredicted RBP4.6□□□□□ -1.67
VPS13C-209ENST00000560637 RDH8Q9NYR8 311 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 OR1A1Q9P1Q5 309 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 ZDHHC8Q9ULC8 765 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 NPTNQ9Y639 398 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 FLNCQ14315 2725 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 PPIAL4CA0A0B4J2A2 164 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 A0A1B0GW55 424 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 BTBD17A6NE02 478 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 TEX46H3BTG2 121 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 CRYZL1O95825 349 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 IFNA10P01566 189 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 IGKV3-15P01624 115 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 DUX4L2P0CJ85 424 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 DUX4L3P0CJ86 424 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 DUX4L4P0CJ87 422 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 DUX4L5P0CJ88 424 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 DUX4L6P0CJ89 424 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 DUX4L7P0CJ90 424 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 PPIAL4GP0DN37 164 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 DEFA4P12838 97 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 EGR1P18146 543 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 PVALBP20472 110 aaPredicted RBP4.6□□□□□ -1.67
VPS13C-209ENST00000560637 AADACP22760 399 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 FGL1Q08830 312 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 CLINT1Q14677 625 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 IZUMO4Q1ZYL8 232 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 DUX4L9Q6RFH8 374 aaPredicted RBP4.6□□□□□ -1.67
VPS13C-209ENST00000560637 SPICQ8N5J4 248 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 GRPEL2Q8TAA5 225 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 ZFAND1Q8TCF1 268 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 IGFBPL1Q8WX77 278 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 DCUN1D4Q92564 292 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 RANGRFQ9HD47 186 aaPredicted RBP4.6□□□□□ -1.67
VPS13C-209ENST00000560637 HEYLQ9NQ87 328 aaPredicted RBP4.6□□□□□ -1.67
VPS13C-209ENST00000560637 DUX4Q9UBX2 424 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 F8P00451 2351 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 TRIM64A6NGJ6 449 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 DVL1O14640 695 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 SOX15O60248 233 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 HBZP02008 142 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 ZNF79Q15937 498 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 WDR82Q6UXN9 313 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 SPAG16Q8N0X2 631 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 ZNF431Q8TF32 576 aaPredicted RBP4.6□□□□□ -1.67
VPS13C-209ENST00000560637 ITLN2Q8WWU7 325 aaPredicted RBP4.6□□□□□ -1.67
VPS13C-209ENST00000560637 YIPF5Q969M3 257 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 CBLN4Q9NTU7 201 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 ANXA10Q9UJ72 324 aa4.6□□□□□ -1.67
VPS13C-209ENST00000560637 ANKRD17O75179 2603 aaKnown RBP4.6□□□□□ -1.67
VPS13C-209ENST00000560637 IGHV3-21A0A0B4J1V1 117 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 TMEM238LA0A1B0GVL6 79 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 ODAMA1E959 279 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 DHRS7CA6NNS2 312 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 RNF223E7ERA6 249 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 H7C1Q1 480 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms