RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 SLC25A40Q8TBP6 338 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 SECTM1Q8WVN6 248 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 LSM10Q969L4 123 aaKnown RBP8.24□□□□□ -1.09
RTF1-206ENST00000560447 TP53RKQ96S44 253 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 OR2J1Q9GZK6 312 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 CXXC4Q9H2H0 198 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 ASF1BQ9NVP2 202 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 ZNF629Q9UEG4 869 aaPredicted RBP8.24□□□□□ -1.09
RTF1-206ENST00000560447 PURGQ9UJV8 347 aaKnown RBP8.24□□□□□ -1.09
RTF1-206ENST00000560447 PROCRQ9UNN8 238 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 CARHSP1Q9Y2V2 147 aaKnown RBP8.24□□□□□ -1.09
RTF1-206ENST00000560447 SHANK1Q9Y566 2161 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 IGKV1-6A0A0C4DH72 117 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 A0A1B0GU03 582 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 ZNF705EA8MWA4 302 aaPredicted RBP8.23□□□□□ -1.09
RTF1-206ENST00000560447 TRIM77I1YAP6 450 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 SLC33A1O00400 549 aaPredicted RBP8.23□□□□□ -1.09
RTF1-206ENST00000560447 WDR1O75083 606 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 PITX3O75364 302 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 ATG12O94817 140 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 SCGB1D2O95969 90 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 CAV2P51636 162 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 ID3Q02535 119 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 PSG7Q13046 419 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 ZNF154Q13106 437 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 PDCD1Q15116 288 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 TSC22D1Q15714 1073 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 SWI5Q1ZZU3 235 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 MST1LQ2TV78 715 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 ZNF718Q3SXZ3 478 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 SP6Q3SY56 376 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 SLC35E4Q6ICL7 350 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 TRAT1Q6PIZ9 186 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 ZNF818PQ6ZRF7 136 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 FAM90A1Q86YD7 464 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 SVBPQ8N300 66 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 C9orf106Q8NAJ2 232 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 DMBX1Q8NFW5 382 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 OR10V1Q8NGI7 309 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 OR11L1Q8NGX0 322 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 LHFPL5Q8TAF8 219 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 KLF14Q8TD94 323 aaPredicted RBP8.23□□□□□ -1.09
RTF1-206ENST00000560447 SEC11CQ9BY50 192 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 OR2S2Q9NQN1 319 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 TAAR3PQ9P1P4 343 aa8.23□□□□□ -1.09
RTF1-206ENST00000560447 IGKV1D-13A0A0B4J2D9 117 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 TMEM30CPA0ZSE6 113 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 LGALS8O00214 317 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 PGLYRP1O75594 196 aaPredicted RBP8.22□□□□□ -1.09
RTF1-206ENST00000560447 LYZL6O75951 148 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 NXPH2O95156 264 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 OR2H2O95918 312 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 CGAP01215 116 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 CRYABP02511 175 aaKnown RBP8.22□□□□□ -1.09
RTF1-206ENST00000560447 IGKV1-13P0DP09 117 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 SPP1P10451 314 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 NBL1P41271 181 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 DEFB109BQ30KR1 87 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 PXDC1Q5TGL8 231 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 BTNL8Q6UX41 500 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 MEX3BQ6ZN04 569 aaKnown RBP8.22□□□□□ -1.09
RTF1-206ENST00000560447 Q6ZS92 163 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 WDR86Q86TI4 376 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 FOXRED2Q8IWF2 684 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 OR2C3Q8N628 320 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 CNEP1R1Q8N9A8 125 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 LFNGQ8NES3 379 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 OR10Z1Q8NGY1 313 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 RDH5Q92781 318 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 C1QTNF6Q9BXI9 259 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 SMDT1Q9H4I9 107 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 PLEKHF2Q9H8W4 249 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 ZNF71Q9NQZ8 489 aaPredicted RBP8.22□□□□□ -1.09
RTF1-206ENST00000560447 CCL28Q9NRJ3 127 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 LYRM2Q9NU23 88 aaPredicted RBP8.22□□□□□ -1.09
RTF1-206ENST00000560447 LIN7CQ9NUP9 197 aaKnown RBP8.22□□□□□ -1.09
RTF1-206ENST00000560447 KCNIP1Q9NZI2 227 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 LUZP4Q9P127 313 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 IL36RNQ9UBH0 155 aa8.22□□□□□ -1.09
RTF1-206ENST00000560447 RCL1Q9Y2P8 373 aaKnown RBP8.22□□□□□ -1.09
RTF1-206ENST00000560447 OTOGLQ3ZCN5 2332 aa8.21□□□□□ -1.09
RTF1-206ENST00000560447 FRYLO94915 3013 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 A0A1B0GW64 132 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 NKX2-6A6NCS4 301 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 OR5H1A6NKK0 313 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 UMAD1C9J7I0 102 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 FAM90A26D6RGX4 464 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 HS3ST1O14792 307 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 HSPA12AO43301 675 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 FBXO24O75426 580 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 MED6O75586 246 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 RHBDL1O75783 438 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 PTBP3O95758 552 aaKnown RBP8.21□□□□□ -1.1
RTF1-206ENST00000560447 APOC3P02656 99 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 HEXAP06865 529 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 CELA3BP08861 270 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 DANCRP0C864 163 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 WT1P19544 449 aaPredicted RBP8.21□□□□□ -1.1
RTF1-206ENST00000560447 GCH1P30793 250 aa8.21□□□□□ -1.1
RTF1-206ENST00000560447 TIMP3P35625 211 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms