RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 GPAT3Q53EU6 434 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 UNC50Q53HI1 259 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 CFAP157Q5JU67 520 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 HHATQ5VTY9 493 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 C8orf74Q6P047 294 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 SLC35D2Q76EJ3 337 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 HDDC2Q7Z4H3 204 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 RANBP3LQ86VV4 465 aaPredicted RBP2.08□□□□□ -2.08
LRRC28-218ENST00000560236 ENTHD1Q8IYW4 607 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 CENPLQ8N0S6 344 aaPredicted RBP2.08□□□□□ -2.08
LRRC28-218ENST00000560236 OR5AS1Q8N127 324 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 CADM2Q8N3J6 435 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 OR11H6Q8NGC7 330 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 OR5D16Q8NGK9 328 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 OR1N2Q8NGR9 330 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 FRZBQ92765 325 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 STMN2Q93045 179 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 MCHR2Q969V1 340 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 ROPN1LQ96C74 230 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 RAB3CQ96E17 227 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 MRPL53Q96EL3 112 aaKnown RBP2.08□□□□□ -2.08
LRRC28-218ENST00000560236 MS4A14Q96JA4 679 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 UBE2E2Q96LR5 201 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 NOL4LQ96MY1 436 aaPredicted RBP2.08□□□□□ -2.08
LRRC28-218ENST00000560236 CCT7Q99832 543 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 TMED9Q9BVK6 235 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 HCAR1Q9BXC0 346 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 OR2H1Q9GZK4 316 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 OR51J1Q9H342 316 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 USE1Q9NZ43 259 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 ACTR3BQ9P1U1 418 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 ZNF225Q9UK10 706 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 CHMP2BQ9UQN3 213 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 RNF24Q9Y225 148 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 STARD10Q9Y365 291 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 TMED5Q9Y3A6 229 aa2.08□□□□□ -2.08
LRRC28-218ENST00000560236 C12orf71A8MTZ7 269 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 ODF3BA8MYP8 253 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 PLPP3O14495 311 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 FGF16O43320 207 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 SEC22BO75396 215 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 BANF1O75531 89 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 LYPLA1O75608 230 aaPredicted RBP2.07□□□□□ -2.08
LRRC28-218ENST00000560236 C6orf47O95873 294 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 IGLV1-51P01701 117 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 IGHG2P01859 326 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 FGGP02679 453 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 RBP4P02753 201 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 HLA-DPB1P04440 258 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 ARG1P05089 322 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 C2P06681 752 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 GSTA2P09210 222 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 NEFHP12036 1026 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 RPS4Y1P22090 263 aaKnown RBP2.07□□□□□ -2.08
LRRC28-218ENST00000560236 PAX6P26367 422 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 HPCAL1P37235 193 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 SLC18A1P54219 525 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 PKNOX1P55347 436 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 DLX1P56177 255 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 WNT4P56705 351 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 NCALDP61601 193 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 ERVK-25P63136 954 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 ELF3P78545 371 aaPredicted RBP2.07□□□□□ -2.08
LRRC28-218ENST00000560236 PITPNAQ00169 270 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 SCRN3Q0VDG4 424 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 GK2Q14410 553 aaPredicted RBP2.07□□□□□ -2.08
LRRC28-218ENST00000560236 KIAA0040Q15053 153 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 P2RY14Q15391 338 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 MPPED2Q15777 294 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 SNCBQ16143 134 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 DEFB136Q30KP8 78 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 MRPL2Q5T653 305 aaKnown RBP2.07□□□□□ -2.08
LRRC28-218ENST00000560236 PRAMEF6Q5VXH4 476 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 OR2T2Q6IF00 324 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 CCDC137Q6PK04 289 aaKnown RBP2.07□□□□□ -2.08
LRRC28-218ENST00000560236 ACP7Q6ZNF0 438 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 LRRC74BQ6ZQY2 392 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 ASRGL1Q7L266 308 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 LHFPL4Q7Z7J7 247 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 CROCCP2Q86T23 111 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 SLC30A8Q8IWU4 369 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 MKXQ8IYA7 352 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 PEX5LQ8IYB4 626 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 DYNAPQ8N1N2 210 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 C10orf111Q8N326 155 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 STPG2Q8N412 459 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 OR4M1Q8NGD0 313 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 OR5J2Q8NH18 312 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 AKR7LQ8NHP1 331 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 RNASE8Q8TDE3 154 aaKnown RBP2.07□□□□□ -2.08
LRRC28-218ENST00000560236 DNAJA4Q8WW22 397 aaPredicted RBP2.07□□□□□ -2.08
LRRC28-218ENST00000560236 DCUN1D4Q92564 292 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 FAM104AQ969W3 186 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 APOBEC3DQ96AK3 386 aaPredicted RBP2.07□□□□□ -2.08
LRRC28-218ENST00000560236 SLC35G5Q96KT7 338 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 FCRL1Q96LA6 429 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 TRNT1Q96Q11 434 aaKnown RBP2.07□□□□□ -2.08
LRRC28-218ENST00000560236 CCL13Q99616 98 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 ERP44Q9BS26 406 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 MFFQ9GZY8 342 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms