RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 CREB3L1Q96BA8 519 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 PHF21AQ96BD5 680 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 MBD6Q96DN6 1003 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 NUDT11Q96G61 164 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 Q96MF0 132 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 CMSS1Q9BQ75 279 aaKnown RBP4.31□□□□□ -1.72
SPG11-220ENST00000559933 PIMREGQ9BSJ6 248 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 MRI1Q9BV20 369 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 ST6GALNAC5Q9BVH7 336 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 ABCB10Q9NRK6 738 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 RASL12Q9NYN1 266 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 KLK11Q9UBX7 282 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 PFDN2Q9UHV9 154 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 KIF25Q9UIL4 384 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 ITGB1BP2Q9UKP3 347 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 ARID1AO14497 2285 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 ARHGAP32A7KAX9 2087 aa4.31□□□□□ -1.72
SPG11-220ENST00000559933 CCDC168Q8NDH2 2452 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 MEIKINA0A087WXM9 373 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 IGHV3-43A0A0B4J1X8 118 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 TRAV38-1A0A0B4J264 116 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 A0A1W2PQ09 198 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 VWC2LB2RUY7 222 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 MCRIP1C9JLW8 97 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 F5H0A9 414 aaPredicted RBP4.3□□□□□ -1.72
SPG11-220ENST00000559933 K7N7A8 449 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 IGHV2-5P01817 119 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 PMP2P02689 132 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 MT-ND4P03905 459 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 CHRM2P08172 466 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 SCTP09683 121 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 IGHV3-43DP0DP04 118 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 IL7P13232 177 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 MUC1P15941 1255 aaPredicted RBP4.3□□□□□ -1.72
SPG11-220ENST00000559933 SPNP16150 400 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 CCL3L1P16619 93 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 OMGP23515 440 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 HLA-DMAP28067 261 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 PRSS3P35030 304 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 MNDAP41218 407 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 NR4A2P43354 598 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 GNG2P59768 71 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 LMO4P61968 165 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 IL13RA1P78552 427 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 LCN2P80188 198 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 MRPS11P82912 194 aaKnown RBP4.3□□□□□ -1.72
SPG11-220ENST00000559933 GNMTQ14749 295 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 ZNF846Q147U1 533 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 KRBOX4Q5JUW0 171 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 PRAMEF5Q5TYX0 476 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 METTL11BQ5VVY1 283 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 PYHIN1Q6K0P9 492 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 FIP1L1Q6UN15 594 aaKnown RBP4.3□□□□□ -1.72
SPG11-220ENST00000559933 CLEC2AQ6UVW9 174 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 ZNF841Q6ZN19 808 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 ZNF497Q6ZNH5 498 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 LINC00596Q86U02 117 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 OR8H2Q8N162 312 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 CIARTQ8N365 385 aaPredicted RBP4.3□□□□□ -1.72
SPG11-220ENST00000559933 Q8N402 240 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 ZNF561Q8N587 486 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 OR1L1Q8NH94 360 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 RFESDQ8TAC1 157 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 GPX8Q8TED1 209 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 SMIM4Q8WVI0 70 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 RAB1CQ92928 201 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 LEAP2Q969E1 77 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 RBMXL1Q96E39 390 aaKnown RBP4.3□□□□□ -1.72
SPG11-220ENST00000559933 MRPS24Q96EL2 167 aaKnown RBP4.3□□□□□ -1.72
SPG11-220ENST00000559933 SDSLQ96GA7 329 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 WDR12Q9GZL7 423 aaKnown RBP4.3□□□□□ -1.72
SPG11-220ENST00000559933 PARP12Q9H0J9 701 aaKnown RBP4.3□□□□□ -1.72
SPG11-220ENST00000559933 ZNF665Q9H7R5 613 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 IFT22Q9H7X7 185 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 C12orf4Q9NQ89 552 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 DIABLOQ9NR28 239 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 OR1A1Q9P1Q5 309 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 ZNRD1Q9P1U0 126 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 SLC25A10Q9UBX3 287 aaPredicted RBP4.3□□□□□ -1.72
SPG11-220ENST00000559933 TBC1D24Q9ULP9 559 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 HSF4Q9ULV5 492 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 CELSR1Q9NYQ6 3014 aa4.3□□□□□ -1.72
SPG11-220ENST00000559933 CR1P17927 2039 aa4.29□□□□□ -1.72
SPG11-220ENST00000559933 PRRC2AP48634 2157 aaKnown RBP4.29□□□□□ -1.72
SPG11-220ENST00000559933 A0A096LNT2 108 aa4.29□□□□□ -1.72
SPG11-220ENST00000559933 IGKV1-6A0A0C4DH72 117 aa4.29□□□□□ -1.72
SPG11-220ENST00000559933 TMEM30CPA0ZSE6 113 aa4.29□□□□□ -1.72
SPG11-220ENST00000559933 ODAMA1E959 279 aa4.29□□□□□ -1.72
SPG11-220ENST00000559933 FAM90A10PA6NDY2 464 aa4.29□□□□□ -1.72
SPG11-220ENST00000559933 FAM90A18PA6NE21 464 aa4.29□□□□□ -1.72
SPG11-220ENST00000559933 FAM90A16PA6NEW6 464 aa4.29□□□□□ -1.72
SPG11-220ENST00000559933 FAM90A20PA6NIJ5 464 aa4.29□□□□□ -1.72
SPG11-220ENST00000559933 FAM90A8PA6NJQ4 464 aa4.29□□□□□ -1.72
SPG11-220ENST00000559933 FAM90A7PA6NKC0 464 aa4.29□□□□□ -1.72
SPG11-220ENST00000559933 SERPINE3A8MV23 424 aa4.29□□□□□ -1.72
SPG11-220ENST00000559933 FAM90A22PA8MWA6 464 aa4.29□□□□□ -1.72
SPG11-220ENST00000559933 FAM90A12PA8MX19 464 aa4.29□□□□□ -1.72
SPG11-220ENST00000559933 FAM90A5PA8MXJ8 464 aa4.29□□□□□ -1.72
SPG11-220ENST00000559933 FAM90A23PA8MXZ1 464 aa4.29□□□□□ -1.72
SPG11-220ENST00000559933 C12orf77C9JDV5 145 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms