RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 LOC105371242A0A075B767 164 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 TRBV23-1A0A0A0MS06 115 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 TRDCB7Z8K6 153 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 C12orf77C9JDV5 145 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 GPR37O15354 613 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 FABP7O15540 132 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 RAB3DO95716 219 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 CD3DP04234 171 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 SCTP09683 121 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 AKAIN1P0CW23 69 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 NAT1P18440 290 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 USF1P22415 310 aaPredicted RBP8.62□□□□□ -1.03
TPM1-221ENST00000559831 SSTR5P35346 364 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 HRH1P35367 487 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 OR3A3P47888 321 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 LCN2P80188 198 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 IFITM3Q01628 133 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 KLF9Q13886 244 aaPredicted RBP8.62□□□□□ -1.03
TPM1-221ENST00000559831 ZNF273Q14593 569 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 HMGN3Q15651 99 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 LTC4SQ16873 150 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 CD276Q5ZPR3 534 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 TMEM200BQ69YZ2 307 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 FAAP20Q6NZ36 180 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 STEAP1BQ6NZ63 245 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 PRSS57Q6UWY2 283 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 TCF23Q7RTU1 214 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 KRTAP1-3Q8IUG1 177 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 LYSMD2Q8IV50 215 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 ZNF565Q8N9K5 539 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 OR1L1Q8NH94 360 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 RFESDQ8TAC1 157 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 IL1F10Q8WWZ1 152 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 ARL11Q969Q4 196 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 COX4I2Q96KJ9 171 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 TINAGL1Q9GZM7 467 aaPredicted RBP8.62□□□□□ -1.03
TPM1-221ENST00000559831 NCOR1P1Q9H4R4 102 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 LPAR2Q9HBW0 351 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 MBNL3Q9NUK0 354 aaKnown RBP8.62□□□□□ -1.03
TPM1-221ENST00000559831 CALYQ9NYX4 217 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 LPAR3Q9UBY5 353 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 ANXA10Q9UJ72 324 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 ITGB1BP2Q9UKP3 347 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 LINC00312Q9Y6C7 94 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 ABCA2Q9BZC7 2435 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 PRRC2AP48634 2157 aaKnown RBP8.62□□□□□ -1.03
TPM1-221ENST00000559831 APCP25054 2843 aa8.62□□□□□ -1.03
TPM1-221ENST00000559831 PPIAL4CA0A0B4J2A2 164 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 POM121CA8CG34 1229 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 KIAA1324LA8MWY0 1029 aaPredicted RBP8.61□□□□□ -1.03
TPM1-221ENST00000559831 C22orf46C9J442 243 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 FAM157AC9JC47 383 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 RNF223E7ERA6 249 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 SDCBPO00560 298 aaPredicted RBP8.61□□□□□ -1.03
TPM1-221ENST00000559831 BET1O15155 118 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 SPINT2O43291 252 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 HBZP02008 142 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 PPIAL4GP0DN37 164 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 CCL3L1P16619 93 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 ZFP36P26651 326 aaKnown RBP8.61□□□□□ -1.03
TPM1-221ENST00000559831 FAUP35544 74 aaKnown RBP8.61□□□□□ -1.03
TPM1-221ENST00000559831 RFX2P48378 723 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 TAS2R46P59540 309 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 DEFA1P59665 94 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 DEFA3P59666 94 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 CDK10Q15131 360 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 SRSF7Q16629 238 aaKnown RBP eCLIP8.61□□□□□ -1.03
TPM1-221ENST00000559831 ACTBL2Q562R1 376 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 IGSF11Q5DX21 431 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 RNASE10Q5GAN6 216 aaKnown RBP8.61□□□□□ -1.03
TPM1-221ENST00000559831 Q6ZS49 121 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 MAPK1IP1LQ8NDC0 245 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 OR5AP2Q8NGF4 316 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 OR4D10Q8NGI6 311 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 OR4C16Q8NGL9 310 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 OR4A4PQ8NGN8 299 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 KIRREL1Q96J84 757 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 ZNF714Q96N38 554 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 FOXC2Q99958 501 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 HRASLSQ9HDD0 168 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 NECAP2Q9NVZ3 263 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 MCUBQ9NWR8 336 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 EHFQ9NZC4 300 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 ONECUT1Q9UBC0 465 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 ZNF107Q9UII5 783 aaPredicted RBP8.61□□□□□ -1.03
TPM1-221ENST00000559831 RPUSD1Q9UJJ7 312 aaKnown RBP8.61□□□□□ -1.03
TPM1-221ENST00000559831 TBC1D24Q9ULP9 559 aa8.61□□□□□ -1.03
TPM1-221ENST00000559831 UBE2J1Q9Y385 318 aaPredicted RBP8.61□□□□□ -1.03
TPM1-221ENST00000559831 WNK2Q9Y3S1 2297 aa8.6□□□□□ -1.03
TPM1-221ENST00000559831 UNC79Q9P2D8 2635 aa8.6□□□□□ -1.03
TPM1-221ENST00000559831 MED13LQ71F56 2210 aa8.6□□□□□ -1.03
TPM1-221ENST00000559831 IGHV3-43A0A0B4J1X8 118 aa8.6□□□□□ -1.03
TPM1-221ENST00000559831 ZNF729A6NN14 1252 aaPredicted RBP8.6□□□□□ -1.03
TPM1-221ENST00000559831 CENPXA8MT69 81 aa8.6□□□□□ -1.03
TPM1-221ENST00000559831 A8MXK9 166 aa8.6□□□□□ -1.03
TPM1-221ENST00000559831 DISC1C4P0D8 188 aa8.6□□□□□ -1.03
TPM1-221ENST00000559831 C15orf65H3BRN8 121 aa8.6□□□□□ -1.03
TPM1-221ENST00000559831 PLA2G10O15496 165 aa8.6□□□□□ -1.03
TPM1-221ENST00000559831 HSPA12AO43301 675 aa8.6□□□□□ -1.03
TPM1-221ENST00000559831 LYRM1O43325 122 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms