RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ZNF555Q8NEP9 628 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 OR5K1Q8NHB7 308 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 FAM57AQ8TBR7 257 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 SCGB1C1Q8TD33 95 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 TWIST2Q8WVJ9 160 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 TMBIM1Q969X1 311 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 ZNF382Q96SR6 550 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 LINC01587Q99440 93 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 EBNA1BP2Q99848 306 aaKnown RBP2.33□□□□□ -2.04
SPG11-218ENST00000559754 ANAPC13Q9BS18 74 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 CHCHD7Q9BUK0 85 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 ZNF717Q9BY31 904 aaPredicted RBP2.33□□□□□ -2.04
SPG11-218ENST00000559754 GLS2Q9UI32 602 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 STOML2Q9UJZ1 356 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 ZNF223Q9UK11 482 aaPredicted RBP2.33□□□□□ -2.04
SPG11-218ENST00000559754 C14orf166Q9Y224 244 aaKnown RBP2.33□□□□□ -2.04
SPG11-218ENST00000559754 POMPQ9Y244 141 aa2.33□□□□□ -2.04
SPG11-218ENST00000559754 LSM5Q9Y4Y9 91 aaKnown RBP2.33□□□□□ -2.04
SPG11-218ENST00000559754 ARHGAP21Q5T5U3 1957 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 AHDC1Q5TGY3 1603 aaPredicted RBP2.32□□□□□ -2.04
SPG11-218ENST00000559754 LOC102724200A0A096LPH7 203 aaPredicted RBP2.32□□□□□ -2.04
SPG11-218ENST00000559754 CENPVL3A0A0U1RRI6 287 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 A0A1W2PP18 115 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 LGALS9O00182 355 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 DENRO43583 198 aaKnown RBP2.32□□□□□ -2.04
SPG11-218ENST00000559754 ARL6IP5O75915 188 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 HLA-DQA1P01909 254 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 MAS1P04201 325 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 IL3P08700 152 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 GABRA1P14867 456 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 CCR7P32248 378 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 KIR3DL2P43630 455 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 HSPA13P48723 471 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 MNAT1P51948 309 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 DAD1P61803 113 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 SLC35A2P78381 396 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 MPPED2Q15777 294 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 UBE2SQ16763 222 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 LRRC75BQ2VPJ9 315 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 CENPWQ5EE01 88 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 TEX30Q5JUR7 227 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 C1orf195Q5TG92 126 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 FAM222AQ5U5X8 452 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 NXNL2Q5VZ03 156 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 MORN3Q6PF18 240 aaPredicted RBP2.32□□□□□ -2.04
SPG11-218ENST00000559754 FAM131AQ6UXB0 335 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 CCDC121Q6ZUS5 278 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 VN1R4Q7Z5H5 301 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 SLC51BQ86UW2 128 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 GID4Q8IVV7 300 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 UBALD2Q8IYN6 164 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 ORMDL3Q8N138 153 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 TMEM256Q8N2U0 113 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 LRRC25Q8N386 305 aaPredicted RBP2.32□□□□□ -2.04
SPG11-218ENST00000559754 OR8A1Q8NGG7 326 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 OR5H2Q8NGV7 314 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 OR11L1Q8NGX0 322 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 OR5W2Q8NH69 310 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 TNFAIP8L1Q8WVP5 186 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 ASB17Q8WXJ9 295 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 FXYD5Q96DB9 178 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 TMA16Q96EY4 203 aaKnown RBP2.32□□□□□ -2.04
SPG11-218ENST00000559754 NARS2Q96I59 477 aaKnown RBP2.32□□□□□ -2.04
SPG11-218ENST00000559754 PPP1R36Q96LQ0 422 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 DOK1Q99704 481 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 CA10Q9NS85 328 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 TMEM216Q9P0N5 145 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 ZNRD1Q9P1U0 126 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 TAC3Q9UHF0 121 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 DKKL1Q9UK85 242 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 ARL2BPQ9Y2Y0 163 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 MMACHCQ9Y4U1 282 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 EIF3AQ14152 1382 aaKnown RBP2.32□□□□□ -2.04
SPG11-218ENST00000559754 ATRNO75882 1429 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 ARAP3Q8WWN8 1544 aa2.32□□□□□ -2.04
SPG11-218ENST00000559754 C5orf63A6NC05 138 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 CLDN24A6NM45 220 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 VGLL3A8MV65 326 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 BTNL10A8MVZ5 291 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 A8MWL6 223 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 D6RAR5 112 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 K7EPK0 472 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 COPEO14579 308 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 SERPINA1P01009 418 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 TNNC2P02585 160 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 OR56A5P0C7T3 313 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 NELFEP18615 380 aaKnown RBP2.31□□□□□ -2.04
SPG11-218ENST00000559754 GADD45AP24522 165 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 DDTP30046 118 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 SLC6A1P30531 599 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 CCR6P51684 374 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 MP68P56378 58 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 RAB5BP61020 215 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 NAA20P61599 178 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 SPATA31B1PQ5VZV4 182 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 TMEM215Q68D42 235 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 FA2HQ7L5A8 372 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 ITPRIPQ8IWB1 547 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 NATD1Q8N6N6 113 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 CLDN22Q8N7P3 220 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms