RNA–Protein interactions for RNA: ENST00000559340.1

LDLR-210, Transcript of low density lipoprotein receptor, humanhuman

TSL 5

Gene LDLR, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-210ENST00000559340 GLP1RP43220 463 aa7.61□□□□□ -1.19
LDLR-210ENST00000559340 KIR2DS4P43632 304 aa7.61□□□□□ -1.19
LDLR-210ENST00000559340 TAS2R20P59543 309 aa7.61□□□□□ -1.19
LDLR-210ENST00000559340 ERVFRD-1P60508 538 aa7.61□□□□□ -1.19
LDLR-210ENST00000559340 ARF6P62330 175 aa7.61□□□□□ -1.19
LDLR-210ENST00000559340 MRPS10P82664 201 aaKnown RBP7.61□□□□□ -1.19
LDLR-210ENST00000559340 GUCA2AQ02747 115 aa7.61□□□□□ -1.19
LDLR-210ENST00000559340 PAX2Q02962 417 aa7.61□□□□□ -1.19
LDLR-210ENST00000559340 SCGB2A2Q13296 93 aa7.61□□□□□ -1.19
LDLR-210ENST00000559340 KIR2DS1Q14954 304 aa7.61□□□□□ -1.19
LDLR-210ENST00000559340 SRSF7Q16629 238 aaKnown RBP eCLIP7.61□□□□□ -1.19
LDLR-210ENST00000559340 CR1LQ2VPA4 569 aa7.61□□□□□ -1.19
LDLR-210ENST00000559340 MOGAT2Q3SYC2 334 aa7.61□□□□□ -1.19
LDLR-210ENST00000559340 ZNF260Q3ZCT1 412 aa7.61□□□□□ -1.19
LDLR-210ENST00000559340 PLAC9Q5JTB6 97 aa7.61□□□□□ -1.19
LDLR-210ENST00000559340 FOXB2Q5VYV0 432 aa7.61□□□□□ -1.19
LDLR-210ENST00000559340 NCR3LG1Q68D85 454 aa7.61□□□□□ -1.19
LDLR-210ENST00000559340 CLEC9AQ6UXN8 241 aa7.61□□□□□ -1.19
LDLR-210ENST00000559340 LINC00299Q6ZSB3 139 aa7.61□□□□□ -1.19
LDLR-210ENST00000559340 FGFRL1Q8N441 504 aa7.61□□□□□ -1.19
LDLR-210ENST00000559340 TPRX1Q8N7U7 411 aa7.61□□□□□ -1.19
LDLR-210ENST00000559340 OR4K15Q8NH41 348 aa7.61□□□□□ -1.19
LDLR-210ENST00000559340 SETD6Q8TBK2 473 aa7.61□□□□□ -1.19
LDLR-210ENST00000559340 MRPL30Q8TCC3 161 aaKnown RBP7.61□□□□□ -1.19
LDLR-210ENST00000559340 CCDC107Q8WV48 283 aa7.61□□□□□ -1.19
LDLR-210ENST00000559340 WDFY2Q96P53 400 aa7.61□□□□□ -1.19
LDLR-210ENST00000559340 METTL8Q9H825 291 aaKnown RBP7.61□□□□□ -1.19
LDLR-210ENST00000559340 SCPEP1Q9HB40 452 aa7.61□□□□□ -1.19
LDLR-210ENST00000559340 MMP26Q9NRE1 261 aa7.61□□□□□ -1.19
LDLR-210ENST00000559340 TMEM160Q9NX00 188 aa7.61□□□□□ -1.19
LDLR-210ENST00000559340 NF1P21359 2839 aa7.61□□□□□ -1.19
LDLR-210ENST00000559340 FABP12A6NFH5 140 aa7.6□□□□□ -1.19
LDLR-210ENST00000559340 C17orf98A8MV24 154 aa7.6□□□□□ -1.19
LDLR-210ENST00000559340 FCN3O75636 299 aa7.6□□□□□ -1.19
LDLR-210ENST00000559340 NAPSAO96009 420 aa7.6□□□□□ -1.19
LDLR-210ENST00000559340 PRTN3P24158 256 aa7.6□□□□□ -1.19
LDLR-210ENST00000559340 PTBP1P26599 531 aaKnown RBP eCLIP7.6□□□□□ -1.19
LDLR-210ENST00000559340 BPIFB3P59826 476 aa7.6□□□□□ -1.19
LDLR-210ENST00000559340 CNPY1Q3B7I2 92 aa7.6□□□□□ -1.19
LDLR-210ENST00000559340 SPANXN2Q5MJ10 180 aa7.6□□□□□ -1.19
LDLR-210ENST00000559340 PYHIN1Q6K0P9 492 aa7.6□□□□□ -1.19
LDLR-210ENST00000559340 ZNF880Q6PDB4 577 aa7.6□□□□□ -1.19
LDLR-210ENST00000559340 CNIH2Q6PI25 160 aa7.6□□□□□ -1.19
LDLR-210ENST00000559340 HEPN1Q6WQI6 88 aa7.6□□□□□ -1.19
LDLR-210ENST00000559340 OR52M1Q8NGK5 317 aa7.6□□□□□ -1.19
LDLR-210ENST00000559340 OR13D1Q8NGV5 346 aa7.6□□□□□ -1.19
LDLR-210ENST00000559340 NANPQ8TBE9 248 aa7.6□□□□□ -1.19
LDLR-210ENST00000559340 MRGPRDQ8TDS7 321 aa7.6□□□□□ -1.19
LDLR-210ENST00000559340 ARL11Q969Q4 196 aa7.6□□□□□ -1.19
LDLR-210ENST00000559340 DACT3Q96B18 629 aaPredicted RBP7.6□□□□□ -1.19
LDLR-210ENST00000559340 GALMQ96C23 342 aa7.6□□□□□ -1.19
LDLR-210ENST00000559340 ZMAT3Q9HA38 289 aaKnown RBP7.6□□□□□ -1.19
LDLR-210ENST00000559340 ZNF286AQ9HBT8 521 aa7.6□□□□□ -1.19
LDLR-210ENST00000559340 Q9N2K0 584 aa7.6□□□□□ -1.19
LDLR-210ENST00000559340 MBNL3Q9NUK0 354 aaKnown RBP7.6□□□□□ -1.19
LDLR-210ENST00000559340 CALYQ9NYX4 217 aa7.6□□□□□ -1.19
LDLR-210ENST00000559340 IDI2-AS1Q9NZ38 188 aa7.6□□□□□ -1.19
LDLR-210ENST00000559340 ZNF581Q9P0T4 197 aa7.6□□□□□ -1.19
LDLR-210ENST00000559340 SESN1Q9Y6P5 492 aa7.6□□□□□ -1.19
LDLR-210ENST00000559340 TMEM235A6NFC5 223 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 TRDCB7Z8K6 153 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 RGS11O94810 467 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 LY6G6DO95868 133 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 CTXN2P0C2S0 81 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 CGB3P0DN86 165 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 CGB7P0DN87 165 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 TNFSF8P32971 234 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 PRRX1P54821 245 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 IL18Q14116 193 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 ZNF273Q14593 569 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 GPR157Q5UAW9 335 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 Q6ZS49 121 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 RTN4RL2Q86UN3 420 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 LAX1Q8IWV1 398 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 IZUMO1Q8IYV9 350 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 OR4A4PQ8NGN8 299 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 OR6Q1Q8NGQ2 317 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 OR13A1Q8NGR1 328 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 FCAMRQ8WWV6 532 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 UPRTQ96BW1 309 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 OCSTAMPQ9BR26 566 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 PCGF1Q9BSM1 259 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 SIRPDQ9H106 197 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 MIXL1Q9H2W2 232 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 LINC00574Q9H8X3 128 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 UNKLQ9H9P5 680 aaKnown RBP7.59□□□□□ -1.19
LDLR-210ENST00000559340 TAF9BQ9HBM6 251 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 IFT46Q9NQC8 304 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 PTTG2Q9NZH5 202 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 KCNK7Q9Y2U2 307 aa7.59□□□□□ -1.19
LDLR-210ENST00000559340 SONP18583 2426 aaKnown RBP7.58□□□□□ -1.2
LDLR-210ENST00000559340 NPIPB11E5RHQ5 1161 aa7.58□□□□□ -1.2
LDLR-210ENST00000559340 TOR1AO14656 332 aa7.58□□□□□ -1.2
LDLR-210ENST00000559340 CTDSPLO15194 276 aa7.58□□□□□ -1.2
LDLR-210ENST00000559340 RBBP9O75884 186 aa7.58□□□□□ -1.2
LDLR-210ENST00000559340 DIRAS3O95661 229 aa7.58□□□□□ -1.2
LDLR-210ENST00000559340 HLA-DQB1P01920 261 aa7.58□□□□□ -1.2
LDLR-210ENST00000559340 LPLP06858 475 aa7.58□□□□□ -1.2
LDLR-210ENST00000559340 FCGR3AP08637 254 aa7.58□□□□□ -1.2
LDLR-210ENST00000559340 IGHV1-8P0DP01 117 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms