RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 HEPN1Q6WQI6 88 aa14.16□□□□□ -0.14
SPG11-215ENST00000559193 MKXQ8IYA7 352 aa14.16□□□□□ -0.14
SPG11-215ENST00000559193 CMTM1Q8IZ96 169 aa14.16□□□□□ -0.14
SPG11-215ENST00000559193 ZNF295-AS1Q8N0V1 137 aa14.16□□□□□ -0.14
SPG11-215ENST00000559193 MUCL1Q96DR8 90 aa14.16□□□□□ -0.14
SPG11-215ENST00000559193 ZNF251Q9BRH9 671 aa14.16□□□□□ -0.14
SPG11-215ENST00000559193 ZNF703Q9H7S9 590 aaPredicted RBP14.16□□□□□ -0.14
SPG11-215ENST00000559193 LRFN1Q9P244 771 aa14.16□□□□□ -0.14
SPG11-215ENST00000559193 C3orf80F5H4A9 247 aa14.15□□□□□ -0.14
SPG11-215ENST00000559193 CER1O95813 267 aa14.15□□□□□ -0.14
SPG11-215ENST00000559193 COX5BP10606 129 aa14.15□□□□□ -0.14
SPG11-215ENST00000559193 CLDN18P56856 261 aa14.15□□□□□ -0.14
SPG11-215ENST00000559193 SSPNQ14714 243 aa14.15□□□□□ -0.14
SPG11-215ENST00000559193 RAB39BQ96DA2 213 aa14.15□□□□□ -0.14
SPG11-215ENST00000559193 ATP5SQ99766 215 aa14.15□□□□□ -0.14
SPG11-215ENST00000559193 TNRC6AQ8NDV7 1962 aaKnown RBP14.15□□□□□ -0.14
SPG11-215ENST00000559193 WRBO00258 174 aa14.15□□□□□ -0.14
SPG11-215ENST00000559193 SCAF4O95104 1147 aaKnown RBP14.15□□□□□ -0.14
SPG11-215ENST00000559193 FBP1P09467 338 aa14.15□□□□□ -0.14
SPG11-215ENST00000559193 F2RP25116 425 aa14.15□□□□□ -0.14
SPG11-215ENST00000559193 OR5A2Q8NGI9 324 aa14.15□□□□□ -0.14
SPG11-215ENST00000559193 H0YL77 283 aa14.14□□□□□ -0.15
SPG11-215ENST00000559193 LILRA1O75019 489 aa14.14□□□□□ -0.15
SPG11-215ENST00000559193 PDGFBP01127 241 aaPredicted RBP14.14□□□□□ -0.15
SPG11-215ENST00000559193 CEBPGP53567 150 aa14.14□□□□□ -0.15
SPG11-215ENST00000559193 RNPS1Q15287 305 aaKnown RBP14.14□□□□□ -0.15
SPG11-215ENST00000559193 FREM1Q5H8C1 2179 aa14.14□□□□□ -0.15
SPG11-215ENST00000559193 ZNF506Q5JVG8 444 aa14.14□□□□□ -0.15
SPG11-215ENST00000559193 AKR1C8PQ5T2L2 129 aa14.14□□□□□ -0.15
SPG11-215ENST00000559193 ZNF324BQ6AW86 544 aaPredicted RBP14.14□□□□□ -0.15
SPG11-215ENST00000559193 C6orf15Q6UXA7 325 aaPredicted RBP14.14□□□□□ -0.15
SPG11-215ENST00000559193 C1QL4Q86Z23 238 aa14.14□□□□□ -0.15
SPG11-215ENST00000559193 OR2M7Q8NG81 312 aa14.14□□□□□ -0.15
SPG11-215ENST00000559193 IER2Q9BTL4 223 aa14.14□□□□□ -0.15
SPG11-215ENST00000559193 TRAV24A0A0B4J272 114 aa14.14□□□□□ -0.15
SPG11-215ENST00000559193 AP4M1O00189 453 aa14.14□□□□□ -0.15
SPG11-215ENST00000559193 CLN5O75503 358 aa14.14□□□□□ -0.15
SPG11-215ENST00000559193 NEURL1O76050 574 aa14.14□□□□□ -0.15
SPG11-215ENST00000559193 IL24Q13007 206 aa14.14□□□□□ -0.15
SPG11-215ENST00000559193 CYB561D1Q8N8Q1 229 aa14.14□□□□□ -0.15
SPG11-215ENST00000559193 GTF3AQ92664 365 aaKnown RBP14.14□□□□□ -0.15
SPG11-215ENST00000559193 THOC3Q96J01 351 aaKnown RBP14.14□□□□□ -0.15
SPG11-215ENST00000559193 POM121L2Q96KW2 1035 aa14.14□□□□□ -0.15
SPG11-215ENST00000559193 HES7Q9BYE0 225 aa14.14□□□□□ -0.15
SPG11-215ENST00000559193 UNKLQ9H9P5 680 aaKnown RBP14.14□□□□□ -0.15
SPG11-215ENST00000559193 LOXL2Q9Y4K0 774 aa14.14□□□□□ -0.15
SPG11-215ENST00000559193 TMEM265A0A087WTH1 108 aa14.13□□□□□ -0.15
SPG11-215ENST00000559193 TRBV6-6A0A0A6YYG2 114 aa14.13□□□□□ -0.15
SPG11-215ENST00000559193 CD300LBA8K4G0 201 aa14.13□□□□□ -0.15
SPG11-215ENST00000559193 ZNF727A8MUV8 499 aa14.13□□□□□ -0.15
SPG11-215ENST00000559193 LINC00587B1AMM8 73 aa14.13□□□□□ -0.15
SPG11-215ENST00000559193 H3BP45 60 aa14.13□□□□□ -0.15
SPG11-215ENST00000559193 CLDND2Q8NHS1 167 aa14.13□□□□□ -0.15
SPG11-215ENST00000559193 OR5P3Q8WZ94 311 aa14.13□□□□□ -0.15
SPG11-215ENST00000559193 RDH5Q92781 318 aa14.13□□□□□ -0.15
SPG11-215ENST00000559193 GPR146Q96CH1 333 aa14.13□□□□□ -0.15
SPG11-215ENST00000559193 TCEAL7Q9BRU2 100 aa14.13□□□□□ -0.15
SPG11-215ENST00000559193 OR2W1Q9Y3N9 320 aa14.13□□□□□ -0.15
SPG11-215ENST00000559193 COL27A1Q8IZC6 1860 aaPredicted RBP14.13□□□□□ -0.15
SPG11-215ENST00000559193 CELSR3Q9NYQ7 3312 aa14.13□□□□□ -0.15
SPG11-215ENST00000559193 KIAA1324LA8MWY0 1029 aaPredicted RBP14.13□□□□□ -0.15
SPG11-215ENST00000559193 HS3ST1O14792 307 aa14.13□□□□□ -0.15
SPG11-215ENST00000559193 HSPB1P04792 205 aaKnown RBP14.13□□□□□ -0.15
SPG11-215ENST00000559193 FABP1P07148 127 aa14.13□□□□□ -0.15
SPG11-215ENST00000559193 TAS2R30P59541 319 aa14.13□□□□□ -0.15
SPG11-215ENST00000559193 OR8G1Q15617 311 aa14.13□□□□□ -0.15
SPG11-215ENST00000559193 ZNF880Q6PDB4 577 aa14.13□□□□□ -0.15
SPG11-215ENST00000559193 H1FOOQ8IZA3 346 aaPredicted RBP14.13□□□□□ -0.15
SPG11-215ENST00000559193 C17orf78Q8N4C9 275 aa14.13□□□□□ -0.15
SPG11-215ENST00000559193 OR51H1Q8NH63 302 aa14.13□□□□□ -0.15
SPG11-215ENST00000559193 TCEAL3Q969E4 200 aa14.13□□□□□ -0.15
SPG11-215ENST00000559193 FAM173AQ9BQD7 235 aa14.13□□□□□ -0.15
SPG11-215ENST00000559193 RIMS4Q9H426 269 aaPredicted RBP14.13□□□□□ -0.15
SPG11-215ENST00000559193 NIT2Q9NQR4 276 aa14.13□□□□□ -0.15
SPG11-215ENST00000559193 GSN-AS1Q9NRJ2 163 aa14.13□□□□□ -0.15
SPG11-215ENST00000559193 MMP24Q9Y5R2 645 aa14.13□□□□□ -0.15
SPG11-215ENST00000559193 IFNA17P01571 189 aa14.12□□□□□ -0.15
SPG11-215ENST00000559193 PSG2P11465 335 aa14.12□□□□□ -0.15
SPG11-215ENST00000559193 HLA-DRB3P79483 266 aa14.12□□□□□ -0.15
SPG11-215ENST00000559193 IZUMO4Q1ZYL8 232 aa14.12□□□□□ -0.15
SPG11-215ENST00000559193 LINC00596Q86U02 117 aa14.12□□□□□ -0.15
SPG11-215ENST00000559193 ZNF429Q86V71 674 aa14.12□□□□□ -0.15
SPG11-215ENST00000559193 HIST1H2AAQ96QV6 131 aa14.12□□□□□ -0.15
SPG11-215ENST00000559193 HIPK2Q9H2X6 1198 aa14.12□□□□□ -0.15
SPG11-215ENST00000559193 PLK3Q9H4B4 646 aa14.12□□□□□ -0.15
SPG11-215ENST00000559193 WSB1Q9Y6I7 421 aa14.12□□□□□ -0.15
SPG11-215ENST00000559193 TXNL1O43396 289 aa14.12□□□□□ -0.15
SPG11-215ENST00000559193 TAGLN2P37802 199 aaKnown RBP14.12□□□□□ -0.15
SPG11-215ENST00000559193 UBE2KP61086 200 aa14.12□□□□□ -0.15
SPG11-215ENST00000559193 TMEM267Q0VDI3 215 aaPredicted RBP14.12□□□□□ -0.15
SPG11-215ENST00000559193 CABLES2Q9BTV7 478 aa14.12□□□□□ -0.15
SPG11-215ENST00000559193 DOCK10Q96BY6 2186 aa14.11□□□□□ -0.15
SPG11-215ENST00000559193 FAM166BA8MTA8 275 aa14.11□□□□□ -0.15
SPG11-215ENST00000559193 PPIHO43447 177 aaKnown RBP14.11□□□□□ -0.15
SPG11-215ENST00000559193 EIF2S3P41091 472 aaKnown RBP14.11□□□□□ -0.15
SPG11-215ENST00000559193 DLK1P80370 383 aa14.11□□□□□ -0.15
SPG11-215ENST00000559193 TLE4Q04727 773 aa14.11□□□□□ -0.15
SPG11-215ENST00000559193 ZNF343Q6P1L6 599 aa14.11□□□□□ -0.15
SPG11-215ENST00000559193 DPPA3Q6W0C5 159 aa14.11□□□□□ -0.15
SPG11-215ENST00000559193 STX12Q86Y82 276 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms