RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 FGFRL1Q8N441 504 aa13.03□□□□□ -0.32
CDC42BPB-203ENST00000558867 PPP1R35Q8TAP8 253 aa13.03□□□□□ -0.32
CDC42BPB-203ENST00000558867 CHAC2Q8WUX2 184 aa13.03□□□□□ -0.32
CDC42BPB-203ENST00000558867 FCAMRQ8WWV6 532 aa13.03□□□□□ -0.32
CDC42BPB-203ENST00000558867 R3HDM4Q96D70 268 aa13.03□□□□□ -0.32
CDC42BPB-203ENST00000558867 MEGF9Q9H1U4 602 aa13.03□□□□□ -0.32
CDC42BPB-203ENST00000558867 AURKAIP1Q9NWT8 199 aaPredicted RBP13.03□□□□□ -0.32
CDC42BPB-203ENST00000558867 SLC25A10Q9UBX3 287 aaPredicted RBP13.03□□□□□ -0.32
CDC42BPB-203ENST00000558867 ZNF107Q9UII5 783 aaPredicted RBP13.03□□□□□ -0.32
CDC42BPB-203ENST00000558867 A0A1B0GW55 424 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 A0A1W2PPH5 198 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 NAP1L6A6NFF2 107 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 CDIPTO14735 213 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 CST4P01036 141 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 NRASP01111 189 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 GSTT2BP0CG30 244 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 DUX4L2P0CJ85 424 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 DUX4L3P0CJ86 424 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 DUX4L4P0CJ87 422 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 DUX4L5P0CJ88 424 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 DUX4L6P0CJ89 424 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 DUX4L7P0CJ90 424 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 SPNP16150 400 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 SLC6A1P30531 599 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 PTGFRP43088 359 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 FUT6P51993 359 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 PRB3Q04118 309 aaPredicted RBP13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 KLF9Q13886 244 aaPredicted RBP13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 ZNF57Q68EA5 555 aaPredicted RBP13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 STUMQ69YW2 141 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 DUX4L9Q6RFH8 374 aaPredicted RBP13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 NDUFA11Q86Y39 141 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 C11orf53Q8IXP5 236 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 TOMM5Q8N4H5 51 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 OR10Z1Q8NGY1 313 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 FAM46BQ96A09 425 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 CST11Q9H112 138 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 ATG5Q9H1Y0 275 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 TAS2R8Q9NYW2 309 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 DUX4Q9UBX2 424 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 MTFP1Q9UDX5 166 aa13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 MRPS7Q9Y2R9 242 aaKnown RBP13.02□□□□□ -0.33
CDC42BPB-203ENST00000558867 ANKRD20A5PA0PJZ0 165 aa13.01□□□□□ -0.33
CDC42BPB-203ENST00000558867 CENPXA8MT69 81 aa13.01□□□□□ -0.33
CDC42BPB-203ENST00000558867 RAB27BO00194 218 aa13.01□□□□□ -0.33
CDC42BPB-203ENST00000558867 ANGPTL7O43827 346 aa13.01□□□□□ -0.33
CDC42BPB-203ENST00000558867 ORC5O43913 435 aa13.01□□□□□ -0.33
CDC42BPB-203ENST00000558867 GDNFP39905 211 aa13.01□□□□□ -0.33
CDC42BPB-203ENST00000558867 LGALS4P56470 323 aa13.01□□□□□ -0.33
CDC42BPB-203ENST00000558867 ZP1P60852 638 aa13.01□□□□□ -0.33
CDC42BPB-203ENST00000558867 MADCAM1Q13477 382 aa13.01□□□□□ -0.33
CDC42BPB-203ENST00000558867 GPR176Q14439 515 aa13.01□□□□□ -0.33
CDC42BPB-203ENST00000558867 GLIPR1L1Q6UWM5 242 aa13.01□□□□□ -0.33
CDC42BPB-203ENST00000558867 PNKDQ8N490 385 aa13.01□□□□□ -0.33
CDC42BPB-203ENST00000558867 FAM89BQ8N5H3 189 aa13.01□□□□□ -0.33
CDC42BPB-203ENST00000558867 OR5T2Q8NGG2 359 aa13.01□□□□□ -0.33
CDC42BPB-203ENST00000558867 OR52I2Q8NH67 350 aa13.01□□□□□ -0.33
CDC42BPB-203ENST00000558867 ENKURQ8TC29 256 aa13.01□□□□□ -0.33
CDC42BPB-203ENST00000558867 GPER1Q99527 375 aa13.01□□□□□ -0.33
CDC42BPB-203ENST00000558867 NKX3-1Q99801 234 aaPredicted RBP13.01□□□□□ -0.33
CDC42BPB-203ENST00000558867 RTL8AQ9BWD3 113 aa13.01□□□□□ -0.33
CDC42BPB-203ENST00000558867 AUNIPQ9H7T9 357 aa13.01□□□□□ -0.33
CDC42BPB-203ENST00000558867 IL36GQ9NZH8 169 aa13.01□□□□□ -0.33
CDC42BPB-203ENST00000558867 COPZ2Q9P299 210 aa13.01□□□□□ -0.33
CDC42BPB-203ENST00000558867 hCG_2014768A0A024R1R8 64 aa13□□□□□ -0.33
CDC42BPB-203ENST00000558867 TRAV18A0A075B6X5 111 aa13□□□□□ -0.33
CDC42BPB-203ENST00000558867 TRBV23-1A0A0A0MS06 115 aa13□□□□□ -0.33
CDC42BPB-203ENST00000558867 hCG_1809904A0A1W2PP81 198 aa13□□□□□ -0.33
CDC42BPB-203ENST00000558867 A0A1W2PPE2 198 aa13□□□□□ -0.33
CDC42BPB-203ENST00000558867 A0A1W2PR64 198 aa13□□□□□ -0.33
CDC42BPB-203ENST00000558867 A0A1W2PRV1 198 aa13□□□□□ -0.33
CDC42BPB-203ENST00000558867 TMEM210A6NLX4 147 aa13□□□□□ -0.33
CDC42BPB-203ENST00000558867 KDM4BO94953 1096 aa13□□□□□ -0.33
CDC42BPB-203ENST00000558867 CD3GP09693 182 aa13□□□□□ -0.33
CDC42BPB-203ENST00000558867 CD33P20138 364 aa13□□□□□ -0.33
CDC42BPB-203ENST00000558867 PRSS3P35030 304 aa13□□□□□ -0.33
CDC42BPB-203ENST00000558867 OR3A4PP47883 348 aa13□□□□□ -0.33
CDC42BPB-203ENST00000558867 RBP2P50120 134 aa13□□□□□ -0.33
CDC42BPB-203ENST00000558867 ZNF788Q6ZQV5 615 aa13□□□□□ -0.33
CDC42BPB-203ENST00000558867 IZUMO1Q8IYV9 350 aa13□□□□□ -0.33
CDC42BPB-203ENST00000558867 PXT1Q8NFP0 134 aa13□□□□□ -0.33
CDC42BPB-203ENST00000558867 GPX8Q8TED1 209 aa13□□□□□ -0.33
CDC42BPB-203ENST00000558867 MARVELD1Q9BSK0 173 aa13□□□□□ -0.33
CDC42BPB-203ENST00000558867 URM1Q9BTM9 101 aaKnown RBP13□□□□□ -0.33
CDC42BPB-203ENST00000558867 PAPOLGQ9BWT3 736 aaKnown RBP13□□□□□ -0.33
CDC42BPB-203ENST00000558867 TM2D1Q9BX74 207 aa13□□□□□ -0.33
CDC42BPB-203ENST00000558867 LPAR5Q9H1C0 372 aa13□□□□□ -0.33
CDC42BPB-203ENST00000558867 TLNRD1Q9H1K6 362 aa13□□□□□ -0.33
CDC42BPB-203ENST00000558867 KCNK15Q9H427 330 aa13□□□□□ -0.33
CDC42BPB-203ENST00000558867 HEXA-AS1Q9H8Q6 139 aa13□□□□□ -0.33
CDC42BPB-203ENST00000558867 GPR173Q9NS66 373 aa13□□□□□ -0.33
CDC42BPB-203ENST00000558867 SLC7A11Q9UPY5 501 aa13□□□□□ -0.33
CDC42BPB-203ENST00000558867 MPC1Q9Y5U8 109 aa13□□□□□ -0.33
CDC42BPB-203ENST00000558867 FAM240BA0A1B0GVZ2 78 aa12.99□□□□□ -0.33
CDC42BPB-203ENST00000558867 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.99□□□□□ -0.33
CDC42BPB-203ENST00000558867 SIGLEC5O15389 551 aa12.99□□□□□ -0.33
CDC42BPB-203ENST00000558867 ZNF780AO75290 641 aaPredicted RBP12.99□□□□□ -0.33
CDC42BPB-203ENST00000558867 BTCP35070 178 aa12.99□□□□□ -0.33
CDC42BPB-203ENST00000558867 ATP1B3P54709 279 aa12.99□□□□□ -0.33
CDC42BPB-203ENST00000558867 DLX1P56177 255 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms