RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 MED21Q13503 144 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 C17orf58Q2M2W7 97 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 PIGYQ3MUY2 71 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 CCDC58Q4VC31 144 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 ABCA11PQ4W5N1 156 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 ZNF529Q6P280 563 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 RPL22L1Q6P5R6 122 aaKnown RBP6.43□□□□□ -1.38
TRAF3-205ENST00000558700 TMPRSS11AQ6ZMR5 421 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 LINC00596Q86U02 117 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 SATL1Q86VE3 508 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 ZNF565Q8N9K5 539 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 ZNF555Q8NEP9 628 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 OR51A2Q8NGJ7 313 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 OR52I1Q8NGK6 324 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 OR13A1Q8NGR1 328 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 CNIH3Q8TBE1 160 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 MRGPRDQ8TDS7 321 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 SGCDQ92629 289 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 MUL1Q969V5 352 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 TMEM106AQ96A25 262 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 PHF21AQ96BD5 680 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 BARHL1Q9BZE3 327 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 S100A14Q9HCY8 104 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 FGF20Q9NP95 211 aaPredicted RBP6.43□□□□□ -1.38
TRAF3-205ENST00000558700 MBNL3Q9NUK0 354 aaKnown RBP6.43□□□□□ -1.38
TRAF3-205ENST00000558700 MRPS18AQ9NVS2 196 aaKnown RBP6.43□□□□□ -1.38
TRAF3-205ENST00000558700 NECAP2Q9NVZ3 263 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 FAM118AQ9NWS6 357 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 SMPD3Q9NY59 655 aaPredicted RBP6.43□□□□□ -1.38
TRAF3-205ENST00000558700 TAS2R4Q9NYW5 299 aa6.43□□□□□ -1.38
TRAF3-205ENST00000558700 TSSC4Q9Y5U2 329 aaPredicted RBP6.43□□□□□ -1.38
TRAF3-205ENST00000558700 TRAV24A0A0B4J272 114 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 TCRBV4S1A1TA0A5B7 111 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 J3QR06 171 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 FAM106CPP0CH98 169 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 MYL12AP19105 171 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 DCKP27707 260 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 SSTR5P35346 364 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 RAB7AP51149 207 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 RBM11P57052 281 aaKnown RBP6.42□□□□□ -1.38
TRAF3-205ENST00000558700 MADCAM1Q13477 382 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 FBLN7Q53RD9 439 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 NHLRC3Q5JS37 347 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 C9orf152Q5JTZ5 239 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 DDI2Q5TDH0 399 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 RSBN1Q5VWQ0 802 aaPredicted RBP6.42□□□□□ -1.38
TRAF3-205ENST00000558700 Q6ZPA2 131 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 CENPVQ7Z7K6 275 aaPredicted RBP6.42□□□□□ -1.38
TRAF3-205ENST00000558700 OR8H3Q8N146 312 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 OSR2Q8N2R0 312 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 RNF152Q8N8N0 203 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 OR10A7Q8NGE5 316 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 OR10K1Q8NGX5 313 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 OR56B4Q8NH76 319 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 MRAPQ8TCY5 172 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 APH1BQ8WW43 257 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 RGP1Q92546 391 aaPredicted RBP6.42□□□□□ -1.38
TRAF3-205ENST00000558700 MYDGFQ969H8 173 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 SMIM19Q96E16 107 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 NR1H4Q96RI1 486 aaPredicted RBP6.42□□□□□ -1.38
TRAF3-205ENST00000558700 S100A13Q99584 98 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 SLC29A1Q99808 456 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 ZNF649Q9BS31 505 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 METTL9Q9H1A3 318 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 LINC00574Q9H8X3 128 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 TMEM138Q9NPI0 162 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 PAK1IP1Q9NWT1 392 aaPredicted RBP6.42□□□□□ -1.38
TRAF3-205ENST00000558700 IDI2-AS1Q9NZ38 188 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 IL36GQ9NZH8 169 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 CKLFQ9UBR5 152 aa6.42□□□□□ -1.38
TRAF3-205ENST00000558700 PRKDCP78527 4128 aaKnown RBP6.42□□□□□ -1.38
TRAF3-205ENST00000558700 A0A1W2PPI3 338 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 TMEM30CPA0ZSE6 113 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 LY6LH3BQJ8 138 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 FGF16O43320 207 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 ZNF780AO75290 641 aaPredicted RBP6.41□□□□□ -1.38
TRAF3-205ENST00000558700 OR7C1O76099 320 aaPredicted RBP6.41□□□□□ -1.38
TRAF3-205ENST00000558700 DUS4LO95620 317 aaKnown RBP6.41□□□□□ -1.38
TRAF3-205ENST00000558700 PRB2P02812 416 aaPredicted RBP6.41□□□□□ -1.38
TRAF3-205ENST00000558700 SNRNP70P08621 437 aaKnown RBP6.41□□□□□ -1.38
TRAF3-205ENST00000558700 LIMS3P0CW19 117 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 LIMS4P0CW20 117 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 CGB3P0DN86 165 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 CGB7P0DN87 165 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 TMEM11P17152 192 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 IL3RAP26951 378 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 BDKRB2P30411 391 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 ZNF93P35789 620 aaPredicted RBP6.41□□□□□ -1.38
TRAF3-205ENST00000558700 GNG10P50151 68 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 ETV1P50549 477 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 GTF2A1P52655 376 aaPredicted RBP6.41□□□□□ -1.38
TRAF3-205ENST00000558700 RIPK1Q13546 671 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 HES1Q14469 280 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 MPV17LQ2QL34 196 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 XAF1Q6GPH4 301 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 ASCL4Q6XD76 172 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 SLC16A12Q6ZSM3 486 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 SUMF2Q8NBJ7 301 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 SETD9Q8NE22 299 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 Q8NFD4 153 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms