RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 C9orf139Q6ZV77 190 aa12.63□□□□□ -0.39
LINC01220-201ENST00000558575 C5orf24Q7Z6I8 188 aa12.63□□□□□ -0.39
LINC01220-201ENST00000558575 CCDC107Q8WV48 283 aa12.63□□□□□ -0.39
LINC01220-201ENST00000558575 AJUBAQ96IF1 538 aa12.63□□□□□ -0.39
LINC01220-201ENST00000558575 URM1Q9BTM9 101 aaKnown RBP12.63□□□□□ -0.39
LINC01220-201ENST00000558575 LINC00574Q9H8X3 128 aa12.63□□□□□ -0.39
LINC01220-201ENST00000558575 ETAA1Q9NY74 926 aa12.63□□□□□ -0.39
LINC01220-201ENST00000558575 TAS2R3Q9NYW6 316 aa12.63□□□□□ -0.39
LINC01220-201ENST00000558575 OR6C3Q9NZP0 311 aa12.63□□□□□ -0.39
LINC01220-201ENST00000558575 KBTBD11-OT1A0A1B0GTJ5 212 aa12.62□□□□□ -0.39
LINC01220-201ENST00000558575 A0A1W2PRD5 423 aa12.62□□□□□ -0.39
LINC01220-201ENST00000558575 A0A1W2PRF3 423 aa12.62□□□□□ -0.39
LINC01220-201ENST00000558575 A0A1W2PRM7 423 aa12.62□□□□□ -0.39
LINC01220-201ENST00000558575 TMEM30CPA0ZSE6 113 aa12.62□□□□□ -0.39
LINC01220-201ENST00000558575 NPIPB11E5RHQ5 1161 aa12.62□□□□□ -0.39
LINC01220-201ENST00000558575 RBP4P02753 201 aa12.62□□□□□ -0.39
LINC01220-201ENST00000558575 OMGP23515 440 aa12.62□□□□□ -0.39
LINC01220-201ENST00000558575 SERPINB10P48595 397 aa12.62□□□□□ -0.39
LINC01220-201ENST00000558575 RBM39Q14498 530 aaKnown RBP12.62□□□□□ -0.39
LINC01220-201ENST00000558575 IDNKQ5T6J7 187 aa12.62□□□□□ -0.39
LINC01220-201ENST00000558575 GPR157Q5UAW9 335 aa12.62□□□□□ -0.39
LINC01220-201ENST00000558575 Q6ZPA2 131 aa12.62□□□□□ -0.39
LINC01220-201ENST00000558575 TRAPPC6BQ86SZ2 158 aa12.62□□□□□ -0.39
LINC01220-201ENST00000558575 LGALS14Q8TCE9 139 aa12.62□□□□□ -0.39
LINC01220-201ENST00000558575 MRGPRDQ8TDS7 321 aa12.62□□□□□ -0.39
LINC01220-201ENST00000558575 NEK7Q8TDX7 302 aa12.62□□□□□ -0.39
LINC01220-201ENST00000558575 PTX4Q96A99 478 aa12.62□□□□□ -0.39
LINC01220-201ENST00000558575 ARHGAP5-AS1Q96IT6 56 aa12.62□□□□□ -0.39
LINC01220-201ENST00000558575 NEDD4LQ96PU5 975 aa12.62□□□□□ -0.39
LINC01220-201ENST00000558575 SLC6A7Q99884 636 aa12.62□□□□□ -0.39
LINC01220-201ENST00000558575 KCNK7Q9Y2U2 307 aa12.62□□□□□ -0.39
LINC01220-201ENST00000558575 ZNF729A6NN14 1252 aaPredicted RBP12.61□□□□□ -0.39
LINC01220-201ENST00000558575 C15orf65H3BRN8 121 aa12.61□□□□□ -0.39
LINC01220-201ENST00000558575 H3BUI4 141 aa12.61□□□□□ -0.39
LINC01220-201ENST00000558575 CDK2P24941 298 aa12.61□□□□□ -0.39
LINC01220-201ENST00000558575 RANBP1P43487 201 aa12.61□□□□□ -0.39
LINC01220-201ENST00000558575 UBE2E1P51965 193 aa12.61□□□□□ -0.39
LINC01220-201ENST00000558575 BPIFB3P59826 476 aa12.61□□□□□ -0.39
LINC01220-201ENST00000558575 PRAMEF5Q5TYX0 476 aa12.61□□□□□ -0.39
LINC01220-201ENST00000558575 OLFML2AQ68BL7 652 aa12.61□□□□□ -0.39
LINC01220-201ENST00000558575 HEPN1Q6WQI6 88 aa12.61□□□□□ -0.39
LINC01220-201ENST00000558575 ZDHHC22Q8N966 263 aa12.61□□□□□ -0.39
LINC01220-201ENST00000558575 ZNF565Q8N9K5 539 aa12.61□□□□□ -0.39
LINC01220-201ENST00000558575 OR4K15Q8NH41 348 aa12.61□□□□□ -0.39
LINC01220-201ENST00000558575 RFESDQ8TAC1 157 aa12.61□□□□□ -0.39
LINC01220-201ENST00000558575 MRPL30Q8TCC3 161 aaKnown RBP12.61□□□□□ -0.39
LINC01220-201ENST00000558575 SLC25A46Q96AG3 418 aa12.61□□□□□ -0.39
LINC01220-201ENST00000558575 PECRQ9BY49 303 aa12.61□□□□□ -0.39
LINC01220-201ENST00000558575 MS4A7Q9GZW8 240 aaPredicted RBP12.61□□□□□ -0.39
LINC01220-201ENST00000558575 HEXA-AS1Q9H8Q6 139 aa12.61□□□□□ -0.39
LINC01220-201ENST00000558575 HSF4Q9ULV5 492 aa12.61□□□□□ -0.39
LINC01220-201ENST00000558575 MDFIC2A0A1B0GVS7 189 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 hCG_1809904A0A1W2PP81 198 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 A0A1W2PPE2 198 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 A0A1W2PR64 198 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 A0A1W2PRV1 198 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 CA11O75493 328 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 CLPXO76031 633 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 NAPSAO96009 420 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 HKR1P10072 659 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 RCC1P18754 421 aaPredicted RBP12.6□□□□□ -0.39
LINC01220-201ENST00000558575 GZMHP20718 246 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 COX7A1P24310 79 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 FPR2P25090 351 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 SSTR5P35346 364 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 GLP1RP43220 463 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 DEFB112Q30KQ8 113 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 LDLRAD2Q5SZI1 272 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 NCR3LG1Q68D85 454 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 FAM53AQ6NSI3 398 aaPredicted RBP12.6□□□□□ -0.39
LINC01220-201ENST00000558575 Q6ZTK2 550 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 CLVS1Q8IUQ0 354 aaPredicted RBP12.6□□□□□ -0.39
LINC01220-201ENST00000558575 OR56B1Q8NGI3 324 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 UBALD1Q8TB05 177 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 NDNFQ8TB73 568 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 C17orf50Q8WW18 174 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 JMJD8Q96S16 334 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 HDHD3Q9BSH5 251 aaPredicted RBP12.6□□□□□ -0.39
LINC01220-201ENST00000558575 PRDM13Q9H4Q3 707 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 PLEKHJ1Q9NW61 149 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 CALYQ9NYX4 217 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 AK3Q9UIJ7 227 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 SESN1Q9Y6P5 492 aa12.6□□□□□ -0.39
LINC01220-201ENST00000558575 A0A0U1RQK1 487 aa12.59□□□□□ -0.39
LINC01220-201ENST00000558575 NPFFO15130 113 aa12.59□□□□□ -0.39
LINC01220-201ENST00000558575 GUCA2AQ02747 115 aa12.59□□□□□ -0.39
LINC01220-201ENST00000558575 FOXL1Q12952 345 aa12.59□□□□□ -0.39
LINC01220-201ENST00000558575 SCGB2A2Q13296 93 aa12.59□□□□□ -0.39
LINC01220-201ENST00000558575 ZNF880Q6PDB4 577 aa12.59□□□□□ -0.39
LINC01220-201ENST00000558575 SIGLECL1Q8N7X8 197 aa12.59□□□□□ -0.39
LINC01220-201ENST00000558575 OR11H6Q8NGC7 330 aa12.59□□□□□ -0.39
LINC01220-201ENST00000558575 OR10R2Q8NGX6 335 aa12.59□□□□□ -0.39
LINC01220-201ENST00000558575 SLC25A38Q96DW6 304 aa12.59□□□□□ -0.39
LINC01220-201ENST00000558575 KIRREL1Q96J84 757 aa12.59□□□□□ -0.39
LINC01220-201ENST00000558575 SUCNR1Q9BXA5 334 aa12.59□□□□□ -0.39
LINC01220-201ENST00000558575 ATG5Q9H1Y0 275 aa12.59□□□□□ -0.39
LINC01220-201ENST00000558575 TMEM133Q9H2Q1 129 aa12.59□□□□□ -0.39
LINC01220-201ENST00000558575 GAL3ST2Q9H3Q3 398 aa12.59□□□□□ -0.39
LINC01220-201ENST00000558575 MBNL3Q9NUK0 354 aaKnown RBP12.59□□□□□ -0.39
LINC01220-201ENST00000558575 SCOCQ9UIL1 159 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms