RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 DHRS7BQ6IAN0 325 aaPredicted RBP6.2□□□□□ -1.42
VPS13C-206ENST00000558338 MDP1Q86V88 176 aa6.2□□□□□ -1.42
VPS13C-206ENST00000558338 FAM219AQ8IW50 185 aa6.2□□□□□ -1.42
VPS13C-206ENST00000558338 SELENOHQ8IZQ5 122 aaKnown RBP6.2□□□□□ -1.42
VPS13C-206ENST00000558338 PUSL1Q8N0Z8 303 aaKnown RBP6.2□□□□□ -1.42
VPS13C-206ENST00000558338 OR52M1Q8NGK5 317 aa6.2□□□□□ -1.42
VPS13C-206ENST00000558338 OR10J5Q8NHC4 309 aa6.2□□□□□ -1.42
VPS13C-206ENST00000558338 MRPL30Q8TCC3 161 aaKnown RBP6.2□□□□□ -1.42
VPS13C-206ENST00000558338 PLPPR2Q96GM1 343 aa6.2□□□□□ -1.42
VPS13C-206ENST00000558338 BOD1Q96IK1 185 aa6.2□□□□□ -1.42
VPS13C-206ENST00000558338 AIFM2Q9BRQ8 373 aa6.2□□□□□ -1.42
VPS13C-206ENST00000558338 SMIM3Q9BZL3 60 aa6.2□□□□□ -1.42
VPS13C-206ENST00000558338 OR51I2Q9H344 312 aa6.2□□□□□ -1.42
VPS13C-206ENST00000558338 PLEKHF2Q9H8W4 249 aa6.2□□□□□ -1.42
VPS13C-206ENST00000558338 SPRR3Q9UBC9 169 aa6.2□□□□□ -1.42
VPS13C-206ENST00000558338 ARGFXA6NJG6 315 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 UMAD1C9J7I0 102 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 RNASEK-C17orf49H0YIS7 233 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 HSPA12AO43301 675 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 SYNGR1O43759 233 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 CD5P06127 495 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 SCTP09683 121 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 H2AFB1P0C5Y9 115 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 DANCRP0C864 163 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 MUC1P15941 1255 aaPredicted RBP6.19□□□□□ -1.42
VPS13C-206ENST00000558338 ADCYAP1P18509 176 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 TUBG1P23258 451 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 CAMLGP49069 296 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 EWSR1Q01844 656 aaKnown RBP eCLIP6.19□□□□□ -1.42
VPS13C-206ENST00000558338 PEA15Q15121 130 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 HIKESHIQ53FT3 197 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 SMUG1Q53HV7 270 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 INO80CQ6PI98 192 aaPredicted RBP6.19□□□□□ -1.42
VPS13C-206ENST00000558338 ZNF818PQ6ZRF7 136 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 GAPTQ8N292 157 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 DMBX1Q8NFW5 382 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 OR8G5Q8NG78 346 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 ERGIC1Q969X5 290 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 PBDC1Q9BVG4 233 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 DEFB127Q9H1M4 99 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 TUBG2Q9NRH3 451 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 LYRM2Q9NU23 88 aaPredicted RBP6.19□□□□□ -1.42
VPS13C-206ENST00000558338 CRIM1Q9NZV1 1036 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 OR2W1Q9Y3N9 320 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 VCANP13611 3396 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.19□□□□□ -1.42
VPS13C-206ENST00000558338 NKX2-6A6NCS4 301 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 FAM74A7A6NL05 159 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 H7C2Y5 167 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 WRBO00258 174 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 SMPD2O60906 423 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 ZNF205O95201 554 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 IGHG3P01860 377 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 HEXAP06865 529 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 SFTA3P0C7M3 94 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 ZNF44P15621 663 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 ZNF14P17017 642 aaPredicted RBP6.19□□□□□ -1.42
VPS13C-206ENST00000558338 TNFSF10P50591 281 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 AKR1C2P52895 323 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 PPP1CBP62140 327 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 AKR1C1Q04828 323 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 HERPUD1Q15011 391 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 TGIF1Q15583 401 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 TRIP6Q15654 476 aaKnown RBP6.19□□□□□ -1.42
VPS13C-206ENST00000558338 TSC22D1Q15714 1073 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 GUCA2BQ16661 112 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 ZNF674Q2M3X9 581 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 FAM74A3Q4VXF1 159 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 NMSQ5H8A3 153 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 OR2T2Q6IF00 324 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 H1FOOQ8IZA3 346 aaPredicted RBP6.19□□□□□ -1.42
VPS13C-206ENST00000558338 BATF2Q8N1L9 274 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 AKR1E2Q96JD6 320 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 ADAT1Q9BUB4 502 aaKnown RBP6.19□□□□□ -1.42
VPS13C-206ENST00000558338 SMDT1Q9H4I9 107 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 C11orf1Q9H5F2 150 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 TMEM160Q9NX00 188 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 DLL3Q9NYJ7 618 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 CLCF1Q9UBD9 225 aa6.19□□□□□ -1.42
VPS13C-206ENST00000558338 TRAV24A0A0B4J272 114 aa6.18□□□□□ -1.42
VPS13C-206ENST00000558338 A0A1B0GU03 582 aa6.18□□□□□ -1.42
VPS13C-206ENST00000558338 BTBD17A6NE02 478 aa6.18□□□□□ -1.42
VPS13C-206ENST00000558338 RNF212BA8MTL3 300 aa6.18□□□□□ -1.42
VPS13C-206ENST00000558338 IQCF6A8MYZ5 107 aa6.18□□□□□ -1.42
VPS13C-206ENST00000558338 UBE2CO00762 179 aa6.18□□□□□ -1.42
VPS13C-206ENST00000558338 HSPB6O14558 160 aa6.18□□□□□ -1.42
VPS13C-206ENST00000558338 HSD17B6O14756 317 aa6.18□□□□□ -1.42
VPS13C-206ENST00000558338 NUPL2O15504 423 aaKnown RBP6.18□□□□□ -1.42
VPS13C-206ENST00000558338 ADAM20O43506 726 aa6.18□□□□□ -1.42
VPS13C-206ENST00000558338 PRH1P02810 166 aa6.18□□□□□ -1.42
VPS13C-206ENST00000558338 ACAA1P09110 424 aaPredicted RBP6.18□□□□□ -1.42
VPS13C-206ENST00000558338 CA6P23280 308 aa6.18□□□□□ -1.42
VPS13C-206ENST00000558338 F2RP25116 425 aa6.18□□□□□ -1.42
VPS13C-206ENST00000558338 SNCAP37840 140 aa6.18□□□□□ -1.42
VPS13C-206ENST00000558338 CD200P41217 278 aa6.18□□□□□ -1.42
VPS13C-206ENST00000558338 UCP2P55851 309 aa6.18□□□□□ -1.42
VPS13C-206ENST00000558338 ZNF616Q08AN1 781 aa6.18□□□□□ -1.42
VPS13C-206ENST00000558338 MIDNQ504T8 468 aa6.18□□□□□ -1.42
VPS13C-206ENST00000558338 ANKRD39Q53RE8 183 aa6.18□□□□□ -1.42
VPS13C-206ENST00000558338 C1orf174Q8IYL3 243 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms