RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 SULT1A4P0DMN0 295 aa7.17□□□□□ -1.26
USP3-208ENST00000558285 PSG2P11465 335 aa7.17□□□□□ -1.26
USP3-208ENST00000558285 ARF6P62330 175 aa7.17□□□□□ -1.26
USP3-208ENST00000558285 PAX2Q02962 417 aa7.17□□□□□ -1.26
USP3-208ENST00000558285 ACSM1Q08AH1 577 aa7.17□□□□□ -1.26
USP3-208ENST00000558285 ZNF124Q15973 351 aa7.17□□□□□ -1.26
USP3-208ENST00000558285 SAXO1Q8IYX7 474 aa7.17□□□□□ -1.26
USP3-208ENST00000558285 FAM185AQ8N0U4 392 aa7.17□□□□□ -1.26
USP3-208ENST00000558285 PRSS35Q8N3Z0 413 aa7.17□□□□□ -1.26
USP3-208ENST00000558285 FAM216BQ8N7L0 139 aa7.17□□□□□ -1.26
USP3-208ENST00000558285 SSMEM1Q8WWF3 244 aa7.17□□□□□ -1.26
USP3-208ENST00000558285 EMG1Q92979 244 aaKnown RBP7.17□□□□□ -1.26
USP3-208ENST00000558285 UBE2FQ969M7 185 aa7.17□□□□□ -1.26
USP3-208ENST00000558285 KCTD7Q96MP8 289 aa7.17□□□□□ -1.26
USP3-208ENST00000558285 GPER1Q99527 375 aa7.17□□□□□ -1.26
USP3-208ENST00000558285 OR51J1Q9H342 316 aa7.17□□□□□ -1.26
USP3-208ENST00000558285 AMBNQ9NP70 447 aa7.17□□□□□ -1.26
USP3-208ENST00000558285 EXOSC4Q9NPD3 245 aaKnown RBP7.17□□□□□ -1.26
USP3-208ENST00000558285 OR14J1Q9UGF5 321 aa7.17□□□□□ -1.26
USP3-208ENST00000558285 ZNF222Q9UK12 451 aa7.17□□□□□ -1.26
USP3-208ENST00000558285 GSTK1Q9Y2Q3 226 aa7.17□□□□□ -1.26
USP3-208ENST00000558285 LSM2Q9Y333 95 aaKnown RBP7.17□□□□□ -1.26
USP3-208ENST00000558285 POMT1Q9Y6A1 747 aa7.17□□□□□ -1.26
USP3-208ENST00000558285 IGHV1-69DA0A0B4J2H0 117 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 hADV38S2A0JD32 116 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 RFPL4AA6NLU0 287 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 LINC00587B1AMM8 73 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 C22orf46C9J442 243 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 RFPL4AL1F8VTS6 287 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 SMLR1H3BR10 107 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 PDCD5O14737 125 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 SH2D1BO14796 132 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 PRAF2O60831 178 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 RHBDL1O75783 438 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 HTR3BO95264 441 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 PLATP00750 562 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 AVPP01185 164 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 IGHV1-69P01742 117 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 NMBP08949 121 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 PRTN3P24158 256 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 MAPK3P27361 379 aaPredicted RBP7.16□□□□□ -1.26
USP3-208ENST00000558285 POU3F4P49335 361 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 LGALS4P56470 323 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 ERVFRD-1P60508 538 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 RPL31P62899 125 aaKnown RBP7.16□□□□□ -1.26
USP3-208ENST00000558285 OPCMLQ14982 345 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 SPHARQ15513 63 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 KRTAP24-1Q3LI83 254 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 UQCC3Q6UW78 93 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 C1orf229Q6ZS94 237 aaPredicted RBP7.16□□□□□ -1.26
USP3-208ENST00000558285 SLC25A26Q70HW3 274 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 TMEM17Q86X19 198 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 SIGLECL1Q8N7X8 197 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 C3orf56Q8N813 242 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 CHST4Q8NCG5 386 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 LY6G5BQ8NDX9 201 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 DMBX1Q8NFW5 382 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 OR11H7Q8NGC8 314 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 PPP1R14AQ96A00 147 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 GAFA1Q96PS6 74 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 MDFIQ99750 246 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 WDR13Q9H1Z4 485 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 ZNF69Q9UC07 566 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 SPATA2Q9UM82 520 aa7.16□□□□□ -1.26
USP3-208ENST00000558285 OR4C45A6NMZ5 311 aa7.15□□□□□ -1.26
USP3-208ENST00000558285 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.15□□□□□ -1.26
USP3-208ENST00000558285 TEX46H3BTG2 121 aa7.15□□□□□ -1.26
USP3-208ENST00000558285 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.15□□□□□ -1.26
USP3-208ENST00000558285 CDRT1O95170 752 aa7.15□□□□□ -1.26
USP3-208ENST00000558285 RBP4P02753 201 aa7.15□□□□□ -1.26
USP3-208ENST00000558285 GALP22466 123 aa7.15□□□□□ -1.26
USP3-208ENST00000558285 ANOS1P23352 680 aa7.15□□□□□ -1.26
USP3-208ENST00000558285 FGF9P31371 208 aaPredicted RBP7.15□□□□□ -1.26
USP3-208ENST00000558285 KIR3DL2P43630 455 aa7.15□□□□□ -1.26
USP3-208ENST00000558285 RAB4BP61018 213 aa7.15□□□□□ -1.26
USP3-208ENST00000558285 UBA52P62987 128 aaKnown RBP7.15□□□□□ -1.26
USP3-208ENST00000558285 MEF2CQ06413 473 aaPredicted RBP7.15□□□□□ -1.26
USP3-208ENST00000558285 HNRNPA0Q13151 305 aaKnown RBP7.15□□□□□ -1.26
USP3-208ENST00000558285 GPR176Q14439 515 aa7.15□□□□□ -1.26
USP3-208ENST00000558285 UBE2V2Q15819 145 aa7.15□□□□□ -1.26
USP3-208ENST00000558285 VMO1Q7Z5L0 202 aa7.15□□□□□ -1.26
USP3-208ENST00000558285 PDZD9Q8IXQ8 264 aa7.15□□□□□ -1.26
USP3-208ENST00000558285 FAM58AQ8N1B3 248 aa7.15□□□□□ -1.26
USP3-208ENST00000558285 OR11H4Q8NGC9 324 aa7.15□□□□□ -1.26
USP3-208ENST00000558285 ASB13Q8WXK3 278 aa7.15□□□□□ -1.26
USP3-208ENST00000558285 C22orf15Q8WYQ4 148 aa7.15□□□□□ -1.26
USP3-208ENST00000558285 LHX4Q969G2 390 aa7.15□□□□□ -1.26
USP3-208ENST00000558285 SNX22Q96L94 193 aa7.15□□□□□ -1.26
USP3-208ENST00000558285 NKX6-2Q9C056 277 aaPredicted RBP7.15□□□□□ -1.26
USP3-208ENST00000558285 SIRPDQ9H106 197 aa7.15□□□□□ -1.26
USP3-208ENST00000558285 AASSQ9UDR5 926 aa7.15□□□□□ -1.26
USP3-208ENST00000558285 ZNF281Q9Y2X9 895 aa7.15□□□□□ -1.26
USP3-208ENST00000558285 ZANQ9Y493 2812 aa7.15□□□□□ -1.26
USP3-208ENST00000558285 IGKV1D-17A0A075B6S4 117 aa7.15□□□□□ -1.27
USP3-208ENST00000558285 A6NIN4 97 aa7.15□□□□□ -1.27
USP3-208ENST00000558285 DBX1A6NMT0 343 aa7.15□□□□□ -1.27
USP3-208ENST00000558285 SYNGR1O43759 233 aa7.15□□□□□ -1.27
USP3-208ENST00000558285 VENTXO95231 258 aa7.15□□□□□ -1.27
USP3-208ENST00000558285 CSTBP04080 98 aaKnown RBP7.15□□□□□ -1.27
USP3-208ENST00000558285 TK1P04183 234 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms