RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 VN1R4Q7Z5H5 301 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 C15orf56Q8N910 161 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 ZDHHC22Q8N966 263 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 ZNF555Q8NEP9 628 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 PXT1Q8NFP0 134 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 OR51H1Q8NH63 302 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 JOSD2Q8TAC2 188 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 FAM57AQ8TBR7 257 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 EEF1AKMT1Q8WVE0 214 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 TBL1YQ9BQ87 522 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 OR51I2Q9H344 312 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 HES4Q9HCC6 221 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 ZNRD1Q9P1U0 126 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 YTHDF2Q9Y5A9 579 aaKnown RBP2.6□□□□□ -1.99
TDP1-217ENST00000557782 ZNF706Q9Y5V0 76 aaPredicted RBP2.6□□□□□ -1.99
TDP1-217ENST00000557782 TMEM14AQ9Y6G1 99 aa2.6□□□□□ -1.99
TDP1-217ENST00000557782 TDRD6O60522 2096 aaKnown RBP2.6□□□□□ -1.99
TDP1-217ENST00000557782 DNMT1P26358 1616 aaKnown RBP2.6□□□□□ -1.99
TDP1-217ENST00000557782 YLPM1P49750 1951 aaKnown RBP2.6□□□□□ -1.99
TDP1-217ENST00000557782 LTBP1Q14766 1721 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 NUP214P35658 2090 aaPredicted RBP2.59□□□□□ -1.99
TDP1-217ENST00000557782 C5orf49A4QMS7 147 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 ARGFXA6NJG6 315 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 EVPLLA8MZ36 301 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 TMEM238C9JI98 176 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 C11orf94C9JXX5 98 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 D6RAR5 112 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 TMEM250H0YL14 139 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 IGLV3-25P01717 112 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 HLA-DQA1P01909 254 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 ATP5G1P05496 136 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 CXCL2P19875 107 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 MT3P25713 68 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 WNT4P56705 351 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 RAB5BP61020 215 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 HNRNPA0Q13151 305 aaKnown RBP2.59□□□□□ -1.99
TDP1-217ENST00000557782 EDDM3AQ14507 147 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 TAF1AQ15573 450 aaPredicted RBP2.59□□□□□ -1.99
TDP1-217ENST00000557782 TMEM241Q24JQ0 296 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 GSG1LQ6UXU4 331 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 Q6ZTC4 211 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 ZBTB8OSQ8IWT0 167 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 OR6V1Q8N148 313 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 C11orf42Q8N5U0 333 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 OR2Z1Q8NG97 314 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 OR8A1Q8NGG7 326 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 NARS2Q96I59 477 aaKnown RBP2.59□□□□□ -1.99
TDP1-217ENST00000557782 OR7D2Q96RA2 312 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 PHB2Q99623 299 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 PRRT1Q99946 306 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 TXNIPQ9H3M7 391 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 WFDC1Q9HC57 220 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 MRPL40Q9NQ50 206 aaKnown RBP2.59□□□□□ -1.99
TDP1-217ENST00000557782 CA10Q9NS85 328 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 LINC00527Q9UJ94 153 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 ZNF222Q9UK12 451 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 HDGFL3Q9Y3E1 203 aa2.59□□□□□ -1.99
TDP1-217ENST00000557782 NOS1P29475 1434 aa2.59□□□□□ -2
TDP1-217ENST00000557782 NAV1Q8NEY1 1877 aa2.58□□□□□ -2
TDP1-217ENST00000557782 GPATCH8Q9UKJ3 1502 aaKnown RBP2.58□□□□□ -2
TDP1-217ENST00000557782 TRBV6-6A0A0A6YYG2 114 aa2.58□□□□□ -2
TDP1-217ENST00000557782 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.58□□□□□ -2
TDP1-217ENST00000557782 F5H5P2 479 aa2.58□□□□□ -2
TDP1-217ENST00000557782 PSMD12O00232 456 aaPredicted RBP2.58□□□□□ -2
TDP1-217ENST00000557782 OR2B3O76000 313 aa2.58□□□□□ -2
TDP1-217ENST00000557782 CNIH1O95406 144 aa2.58□□□□□ -2
TDP1-217ENST00000557782 CXorf1O96002 111 aa2.58□□□□□ -2
TDP1-217ENST00000557782 SEC11BP0C7V7 166 aa2.58□□□□□ -2
TDP1-217ENST00000557782 ZNF806P0C7X5 589 aa2.58□□□□□ -2
TDP1-217ENST00000557782 GTF2F2P13984 249 aa2.58□□□□□ -2
TDP1-217ENST00000557782 CTSEP14091 401 aa2.58□□□□□ -2
TDP1-217ENST00000557782 IL1RNP18510 177 aa2.58□□□□□ -2
TDP1-217ENST00000557782 RPS10P46783 165 aaKnown RBP2.58□□□□□ -2
TDP1-217ENST00000557782 REG1BP48304 166 aa2.58□□□□□ -2
TDP1-217ENST00000557782 INPP1P49441 399 aa2.58□□□□□ -2
TDP1-217ENST00000557782 CDK9P50750 372 aaKnown RBP2.58□□□□□ -2
TDP1-217ENST00000557782 SNAP25P60880 206 aa2.58□□□□□ -2
TDP1-217ENST00000557782 EMX1Q04741 257 aaPredicted RBP2.58□□□□□ -2
TDP1-217ENST00000557782 SYCNQ0VAF6 134 aa2.58□□□□□ -2
TDP1-217ENST00000557782 IHHQ14623 411 aa2.58□□□□□ -2
TDP1-217ENST00000557782 MPPED2Q15777 294 aa2.58□□□□□ -2
TDP1-217ENST00000557782 TMEM97Q5BJF2 176 aa2.58□□□□□ -2
TDP1-217ENST00000557782 TMEM215Q68D42 235 aa2.58□□□□□ -2
TDP1-217ENST00000557782 SFXN4Q6P4A7 337 aa2.58□□□□□ -2
TDP1-217ENST00000557782 Q6ZR54 194 aa2.58□□□□□ -2
TDP1-217ENST00000557782 FAM19A3Q7Z5A8 133 aa2.58□□□□□ -2
TDP1-217ENST00000557782 TMED4Q7Z7H5 227 aa2.58□□□□□ -2
TDP1-217ENST00000557782 S100A7AQ86SG5 101 aa2.58□□□□□ -2
TDP1-217ENST00000557782 AKAP14Q86UN6 197 aa2.58□□□□□ -2
TDP1-217ENST00000557782 DOLPP1Q86YN1 238 aa2.58□□□□□ -2
TDP1-217ENST00000557782 RNF175Q8N4F7 328 aa2.58□□□□□ -2
TDP1-217ENST00000557782 OR10G2Q8NGC3 310 aa2.58□□□□□ -2
TDP1-217ENST00000557782 Q8WTZ3 238 aa2.58□□□□□ -2
TDP1-217ENST00000557782 BTF3L4Q96K17 158 aa2.58□□□□□ -2
TDP1-217ENST00000557782 SLC35G5Q96KT7 338 aa2.58□□□□□ -2
TDP1-217ENST00000557782 DERL3Q96Q80 235 aa2.58□□□□□ -2
TDP1-217ENST00000557782 THTPAQ9BU02 230 aa2.58□□□□□ -2
TDP1-217ENST00000557782 SND1-IT1Q9HBX3 110 aa2.58□□□□□ -2
TDP1-217ENST00000557782 FKBP14Q9NWM8 211 aa2.58□□□□□ -2
TDP1-217ENST00000557782 GID8Q9NWU2 228 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms