RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 RPLP1P05386 114 aaKnown RBP12.52□□□□□ -0.41
SCFD1-224ENST00000557713 NHLRC4P0CG21 123 aaPredicted RBP12.52□□□□□ -0.41
SCFD1-224ENST00000557713 REG1BP48304 166 aa12.52□□□□□ -0.41
SCFD1-224ENST00000557713 ALDH3A2P51648 485 aa12.52□□□□□ -0.41
SCFD1-224ENST00000557713 KIR2DS1Q14954 304 aa12.52□□□□□ -0.41
SCFD1-224ENST00000557713 IZUMO1Q8IYV9 350 aa12.52□□□□□ -0.41
SCFD1-224ENST00000557713 C8orf31Q8N9H6 132 aa12.52□□□□□ -0.41
SCFD1-224ENST00000557713 Q8N9W7 124 aa12.52□□□□□ -0.41
SCFD1-224ENST00000557713 OR52M1Q8NGK5 317 aa12.52□□□□□ -0.41
SCFD1-224ENST00000557713 PYDC1Q8WXC3 89 aa12.52□□□□□ -0.41
SCFD1-224ENST00000557713 RGP1Q92546 391 aaPredicted RBP12.52□□□□□ -0.41
SCFD1-224ENST00000557713 ST6GALNAC6Q969X2 333 aa12.52□□□□□ -0.41
SCFD1-224ENST00000557713 JAM3Q9BX67 310 aa12.52□□□□□ -0.41
SCFD1-224ENST00000557713 PLSCR3Q9NRY6 295 aa12.52□□□□□ -0.41
SCFD1-224ENST00000557713 FAM118AQ9NWS6 357 aa12.52□□□□□ -0.41
SCFD1-224ENST00000557713 ST3GAL6Q9Y274 331 aa12.52□□□□□ -0.41
SCFD1-224ENST00000557713 NCBP2LA6PVI3 153 aaKnown RBP12.51□□□□□ -0.41
SCFD1-224ENST00000557713 MPZL2O60487 215 aa12.51□□□□□ -0.41
SCFD1-224ENST00000557713 CDRT1O95170 752 aa12.51□□□□□ -0.41
SCFD1-224ENST00000557713 FADS2O95864 444 aaKnown RBP12.51□□□□□ -0.41
SCFD1-224ENST00000557713 CDX1P47902 265 aaPredicted RBP12.51□□□□□ -0.41
SCFD1-224ENST00000557713 GTF2A1P52655 376 aaPredicted RBP12.51□□□□□ -0.41
SCFD1-224ENST00000557713 GBX2P52951 348 aaPredicted RBP12.51□□□□□ -0.41
SCFD1-224ENST00000557713 NHLRC3Q5JS37 347 aa12.51□□□□□ -0.41
SCFD1-224ENST00000557713 RNF152Q8N8N0 203 aa12.51□□□□□ -0.41
SCFD1-224ENST00000557713 TMEM104Q8NE00 496 aa12.51□□□□□ -0.41
SCFD1-224ENST00000557713 OR2T10Q8NGZ9 312 aa12.51□□□□□ -0.41
SCFD1-224ENST00000557713 RHOXF1Q8NHV9 184 aa12.51□□□□□ -0.41
SCFD1-224ENST00000557713 GON7Q9BXV9 100 aa12.51□□□□□ -0.41
SCFD1-224ENST00000557713 AMBNQ9NP70 447 aa12.51□□□□□ -0.41
SCFD1-224ENST00000557713 TAS2R4Q9NYW5 299 aa12.51□□□□□ -0.41
SCFD1-224ENST00000557713 IL36GQ9NZH8 169 aa12.51□□□□□ -0.41
SCFD1-224ENST00000557713 GMPPBQ9Y5P6 360 aa12.51□□□□□ -0.41
SCFD1-224ENST00000557713 TMEM30CPA0ZSE6 113 aa12.5□□□□□ -0.41
SCFD1-224ENST00000557713 ORC5O43913 435 aa12.5□□□□□ -0.41
SCFD1-224ENST00000557713 CD1BP29016 333 aa12.5□□□□□ -0.41
SCFD1-224ENST00000557713 SOX2P48431 317 aa12.5□□□□□ -0.41
SCFD1-224ENST00000557713 RBM11P57052 281 aaKnown RBP12.5□□□□□ -0.41
SCFD1-224ENST00000557713 RAB40BQ12829 278 aa12.5□□□□□ -0.41
SCFD1-224ENST00000557713 FOXE3Q13461 319 aa12.5□□□□□ -0.41
SCFD1-224ENST00000557713 GPR50Q13585 617 aa12.5□□□□□ -0.41
SCFD1-224ENST00000557713 KLHL22Q53GT1 634 aa12.5□□□□□ -0.41
SCFD1-224ENST00000557713 NKAPLQ5M9Q1 402 aa12.5□□□□□ -0.41
SCFD1-224ENST00000557713 FAM53AQ6NSI3 398 aaPredicted RBP12.5□□□□□ -0.41
SCFD1-224ENST00000557713 LCNL1Q6ZST4 164 aa12.5□□□□□ -0.41
SCFD1-224ENST00000557713 OR52I1Q8NGK6 324 aa12.5□□□□□ -0.41
SCFD1-224ENST00000557713 OR8U1Q8NH10 309 aa12.5□□□□□ -0.41
SCFD1-224ENST00000557713 OR52N1Q8NH53 320 aa12.5□□□□□ -0.41
SCFD1-224ENST00000557713 RTN4IP1Q8WWV3 396 aaPredicted RBP12.5□□□□□ -0.41
SCFD1-224ENST00000557713 ARL11Q969Q4 196 aa12.5□□□□□ -0.41
SCFD1-224ENST00000557713 Q96MT0 163 aa12.5□□□□□ -0.41
SCFD1-224ENST00000557713 S1PR3Q99500 378 aa12.5□□□□□ -0.41
SCFD1-224ENST00000557713 FAM192AQ9GZU8 254 aa12.5□□□□□ -0.41
SCFD1-224ENST00000557713 MRPS18AQ9NVS2 196 aaKnown RBP12.5□□□□□ -0.41
SCFD1-224ENST00000557713 GFOD1Q9NXC2 390 aa12.5□□□□□ -0.41
SCFD1-224ENST00000557713 ING4Q9UNL4 249 aa12.5□□□□□ -0.41
SCFD1-224ENST00000557713 H3BNX3 289 aa12.49□□□□□ -0.41
SCFD1-224ENST00000557713 SDCBPO00560 298 aaPredicted RBP12.49□□□□□ -0.41
SCFD1-224ENST00000557713 GEMIN2O14893 280 aaKnown RBP12.49□□□□□ -0.41
SCFD1-224ENST00000557713 CIB2O75838 187 aa12.49□□□□□ -0.41
SCFD1-224ENST00000557713 OR7C1O76099 320 aaPredicted RBP12.49□□□□□ -0.41
SCFD1-224ENST00000557713 ELANEP08246 267 aa12.49□□□□□ -0.41
SCFD1-224ENST00000557713 LUMP51884 338 aaPredicted RBP12.49□□□□□ -0.41
SCFD1-224ENST00000557713 RAB25P57735 213 aa12.49□□□□□ -0.41
SCFD1-224ENST00000557713 CFHR3Q02985 330 aa12.49□□□□□ -0.41
SCFD1-224ENST00000557713 DEFB136Q30KP8 78 aa12.49□□□□□ -0.41
SCFD1-224ENST00000557713 CXorf66Q5JRM2 361 aaPredicted RBP12.49□□□□□ -0.41
SCFD1-224ENST00000557713 CBR4Q8N4T8 237 aa12.49□□□□□ -0.41
SCFD1-224ENST00000557713 OR5M8Q8NGP6 311 aa12.49□□□□□ -0.41
SCFD1-224ENST00000557713 UBALD1Q8TB05 177 aa12.49□□□□□ -0.41
SCFD1-224ENST00000557713 METTL9Q9H1A3 318 aa12.49□□□□□ -0.41
SCFD1-224ENST00000557713 SCOCQ9UIL1 159 aa12.49□□□□□ -0.41
SCFD1-224ENST00000557713 U3KQK5 164 aa12.49□□□□□ -0.41
SCFD1-224ENST00000557713 ZNF736B4DX44 427 aaPredicted RBP12.48□□□□□ -0.41
SCFD1-224ENST00000557713 MOSP00540 346 aa12.48□□□□□ -0.41
SCFD1-224ENST00000557713 MT-ND4P03905 459 aa12.48□□□□□ -0.41
SCFD1-224ENST00000557713 LIMS3P0CW19 117 aa12.48□□□□□ -0.41
SCFD1-224ENST00000557713 LIMS4P0CW20 117 aa12.48□□□□□ -0.41
SCFD1-224ENST00000557713 VHLP40337 213 aa12.48□□□□□ -0.41
SCFD1-224ENST00000557713 Q3ZCU0 254 aa12.48□□□□□ -0.41
SCFD1-224ENST00000557713 C9orf66Q5T8R8 295 aa12.48□□□□□ -0.41
SCFD1-224ENST00000557713 ZNF497Q6ZNH5 498 aa12.48□□□□□ -0.41
SCFD1-224ENST00000557713 LINC00596Q86U02 117 aa12.48□□□□□ -0.41
SCFD1-224ENST00000557713 OR8H1Q8NGG4 311 aa12.48□□□□□ -0.41
SCFD1-224ENST00000557713 GPR148Q8TDV2 347 aa12.48□□□□□ -0.41
SCFD1-224ENST00000557713 CCDC107Q8WV48 283 aa12.48□□□□□ -0.41
SCFD1-224ENST00000557713 RASL11BQ9BPW5 248 aa12.48□□□□□ -0.41
SCFD1-224ENST00000557713 IGHV3-43A0A0B4J1X8 118 aa12.47□□□□□ -0.41
SCFD1-224ENST00000557713 SLC31A2O15432 143 aa12.47□□□□□ -0.41
SCFD1-224ENST00000557713 IGHG4P01861 327 aa12.47□□□□□ -0.41
SCFD1-224ENST00000557713 CSTBP04080 98 aaKnown RBP12.47□□□□□ -0.41
SCFD1-224ENST00000557713 CD2P06729 351 aa12.47□□□□□ -0.41
SCFD1-224ENST00000557713 IGHV3-43DP0DP04 118 aa12.47□□□□□ -0.41
SCFD1-224ENST00000557713 IL3RAP26951 378 aa12.47□□□□□ -0.41
SCFD1-224ENST00000557713 ZNF93P35789 620 aaPredicted RBP12.47□□□□□ -0.41
SCFD1-224ENST00000557713 F2RL1P55085 397 aa12.47□□□□□ -0.41
SCFD1-224ENST00000557713 MPV17LQ2QL34 196 aa12.47□□□□□ -0.41
SCFD1-224ENST00000557713 CCDC58Q4VC31 144 aa12.47□□□□□ -0.41
SCFD1-224ENST00000557713 XAF1Q6GPH4 301 aa12.47□□□□□ -0.41
SCFD1-224ENST00000557713 RPL22L1Q6P5R6 122 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms