RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 TSTD3H0UI37 97 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 PGLYRP1O75594 196 aaPredicted RBP10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 IFNA10P01566 189 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 EDN3P14138 238 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 NTF4P34130 210 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 CARD18P57730 90 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 MPV17LQ2QL34 196 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 TRIM61Q5EBN2 209 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 FGFBP3Q8TAT2 258 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 NEK7Q8TDX7 302 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 DNASE2BQ8WZ79 361 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 RCC1LQ96I51 464 aaKnown RBP10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 RHOVQ96L33 236 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 CCDC74BQ96LY2 380 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 WDR54Q9H977 334 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 RPRMQ9NS64 109 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 LRFN1Q9P244 771 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 SDK2Q58EX2 2172 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 TRBV24-1A0A075B6N3 115 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 IGHV1-45A0A0A0MS14 117 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 ZNF716A6NP11 495 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 H3BP45 60 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 TNFSF12O43508 249 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 OPN1MWP04001 364 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 OPN1MW2P0DN77 364 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 OPN1MW3P0DN78 364 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 SLC25A6P12236 298 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 F2RP25116 425 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 FGF12P61328 243 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 TMEM267Q0VDI3 215 aaPredicted RBP10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 MBD3L1Q8WWY6 194 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 P2RX4Q99571 388 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 SDF2L1Q9HCN8 221 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 ATP23Q9Y6H3 246 aa10.13□□□□□ -0.79
VIPAS39-211ENST00000557658 SMCO3A2RU48 225 aa10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 CNOT4O95628 575 aaKnown RBP10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 RNPS1Q15287 305 aaKnown RBP10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 C4orf17Q53FE4 359 aa10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 LCN15Q6UWW0 184 aa10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 SSX9Q7RTT3 188 aa10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 REC114Q7Z4M0 266 aa10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 SAXO1Q8IYX7 474 aa10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 GPR146Q96CH1 333 aa10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 IMMP1LQ96LU5 166 aa10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 PACRGQ96M98 296 aaPredicted RBP10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 CABLES2Q9BTV7 478 aa10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 C1QTNF5Q9BXJ0 243 aa10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 CTDSP1Q9GZU7 261 aa10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 ZNF665Q9H7R5 613 aa10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 SH2D2AQ9NP31 389 aa10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 PITPNC1Q9UKF7 332 aa10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 TRIOO75962 3097 aa10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 HLA-HP01893 362 aa10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 SERPINE2P07093 398 aa10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 DDTP30046 118 aa10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 RIPPLY2Q5TAB7 128 aa10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 ZNF468Q5VIY5 522 aaPredicted RBP10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 RNASE11Q8TAA1 199 aaKnown RBP10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 CA5BP1Q8WTZ4 195 aa10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 KCNE4Q8WWG9 221 aa10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 PSMG3Q9BT73 122 aaPredicted RBP10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 RSG1Q9BU20 258 aa10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 PRDM14Q9GZV8 571 aa10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 GPR35Q9HC97 309 aa10.12□□□□□ -0.79
VIPAS39-211ENST00000557658 IGKV1-6A0A0C4DH72 117 aa10.11□□□□□ -0.79
VIPAS39-211ENST00000557658 IFNA1P01562 189 aa10.11□□□□□ -0.79
VIPAS39-211ENST00000557658 PGA5P0DJD9 388 aa10.11□□□□□ -0.79
VIPAS39-211ENST00000557658 COX6A1P12074 109 aa10.11□□□□□ -0.79
VIPAS39-211ENST00000557658 VAX2Q9UIW0 290 aa10.11□□□□□ -0.79
VIPAS39-211ENST00000557658 A0A0G2JRQ6 117 aa10.11□□□□□ -0.79
VIPAS39-211ENST00000557658 HSPB6O14558 160 aa10.11□□□□□ -0.79
VIPAS39-211ENST00000557658 PHOX2AO14813 284 aa10.11□□□□□ -0.79
VIPAS39-211ENST00000557658 CXCL13O43927 109 aa10.11□□□□□ -0.79
VIPAS39-211ENST00000557658 SRD5A2P31213 254 aa10.11□□□□□ -0.79
VIPAS39-211ENST00000557658 B3GALT5-AS1P59052 145 aa10.11□□□□□ -0.79
VIPAS39-211ENST00000557658 PRDX4Q13162 271 aa10.11□□□□□ -0.79
VIPAS39-211ENST00000557658 ACSF3Q4G176 576 aaPredicted RBP10.11□□□□□ -0.79
VIPAS39-211ENST00000557658 YRDCQ86U90 279 aaKnown RBP10.11□□□□□ -0.79
VIPAS39-211ENST00000557658 RPS19BP1Q86WX3 136 aaKnown RBP10.11□□□□□ -0.79
VIPAS39-211ENST00000557658 ZNF295-AS1Q8N0V1 137 aa10.11□□□□□ -0.79
VIPAS39-211ENST00000557658 OR56B2PQ8NGI1 322 aa10.11□□□□□ -0.79
VIPAS39-211ENST00000557658 OR5R1Q8NH85 324 aa10.11□□□□□ -0.79
VIPAS39-211ENST00000557658 GTF3AQ92664 365 aaKnown RBP10.11□□□□□ -0.79
VIPAS39-211ENST00000557658 SNX22Q96L94 193 aa10.11□□□□□ -0.79
VIPAS39-211ENST00000557658 HIST1H2BLQ99880 126 aa10.11□□□□□ -0.79
VIPAS39-211ENST00000557658 RIMS4Q9H426 269 aaPredicted RBP10.11□□□□□ -0.79
VIPAS39-211ENST00000557658 OCIAD1Q9NX40 245 aa10.11□□□□□ -0.79
VIPAS39-211ENST00000557658 A0A087X0M5 115 aa10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 A0A1B0GX30 115 aa10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 KIAA1324LA8MWY0 1029 aaPredicted RBP10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 TRAPPC2LH3BP13 241 aa10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 MMP7P09237 267 aaPredicted RBP10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 JMJD7P0C870 316 aa10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 FGF8P55075 233 aaPredicted RBP10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 ZFP36L1Q07352 338 aaKnown RBP10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 SPEGQ15772 3267 aa10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 MRGPRGQ86SM5 289 aa10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 GGNQ86UU5 652 aa10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 OR10A7Q8NGE5 316 aa10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 OR51H1Q8NH63 302 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms