RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 ERICH5Q6P6B1 374 aa6.91□□□□□ -1.3
NEDD1-211ENST00000557454 EPGNQ6UW88 154 aa6.91□□□□□ -1.3
NEDD1-211ENST00000557454 UNQ5815/PRO19632Q6UWF5 114 aa6.91□□□□□ -1.3
NEDD1-211ENST00000557454 Q6ZRM9 215 aa6.91□□□□□ -1.3
NEDD1-211ENST00000557454 SHFQ7M4L6 423 aa6.91□□□□□ -1.3
NEDD1-211ENST00000557454 Q8IYB0 196 aa6.91□□□□□ -1.3
NEDD1-211ENST00000557454 MNS1Q8NEH6 495 aa6.91□□□□□ -1.3
NEDD1-211ENST00000557454 THEM6Q8WUY1 208 aa6.91□□□□□ -1.3
NEDD1-211ENST00000557454 FAM103A1Q9BTL3 118 aaKnown RBP6.91□□□□□ -1.3
NEDD1-211ENST00000557454 PBOV1Q9GZY1 135 aa6.91□□□□□ -1.3
NEDD1-211ENST00000557454 EGLN3Q9H6Z9 239 aa6.91□□□□□ -1.3
NEDD1-211ENST00000557454 LINC00574Q9H8X3 128 aa6.91□□□□□ -1.3
NEDD1-211ENST00000557454 KLHDC2Q9Y2U9 406 aa6.91□□□□□ -1.3
NEDD1-211ENST00000557454 NUBP2Q9Y5Y2 271 aa6.91□□□□□ -1.3
NEDD1-211ENST00000557454 ENPP4Q9Y6X5 453 aa6.91□□□□□ -1.3
NEDD1-211ENST00000557454 MEIKINA0A087WXM9 373 aa6.9□□□□□ -1.3
NEDD1-211ENST00000557454 TMEM120BA0PK00 339 aa6.9□□□□□ -1.3
NEDD1-211ENST00000557454 NPIPB11E5RHQ5 1161 aa6.9□□□□□ -1.3
NEDD1-211ENST00000557454 LGALS9O00182 355 aa6.9□□□□□ -1.3
NEDD1-211ENST00000557454 SH2D1BO14796 132 aa6.9□□□□□ -1.3
NEDD1-211ENST00000557454 MAGEB3O15480 346 aa6.9□□□□□ -1.3
NEDD1-211ENST00000557454 AIREO43918 545 aa6.9□□□□□ -1.3
NEDD1-211ENST00000557454 ZNF44P15621 663 aa6.9□□□□□ -1.3
NEDD1-211ENST00000557454 IL3RAP26951 378 aa6.9□□□□□ -1.3
NEDD1-211ENST00000557454 CD40LGP29965 261 aa6.9□□□□□ -1.3
NEDD1-211ENST00000557454 VHLP40337 213 aa6.9□□□□□ -1.3
NEDD1-211ENST00000557454 CX3CL1P78423 397 aa6.9□□□□□ -1.3
NEDD1-211ENST00000557454 SCN1BQ07699 218 aa6.9□□□□□ -1.3
NEDD1-211ENST00000557454 LSAMPQ13449 338 aa6.9□□□□□ -1.3
NEDD1-211ENST00000557454 CD200R1LQ6Q8B3 271 aa6.9□□□□□ -1.3
NEDD1-211ENST00000557454 SLC16A12Q6ZSM3 486 aa6.9□□□□□ -1.3
NEDD1-211ENST00000557454 PPP1R27Q86WC6 154 aa6.9□□□□□ -1.3
NEDD1-211ENST00000557454 SLC15A3Q8IY34 581 aa6.9□□□□□ -1.3
NEDD1-211ENST00000557454 STPG3Q8N7X2 389 aa6.9□□□□□ -1.3
NEDD1-211ENST00000557454 SYT8Q8NBV8 401 aa6.9□□□□□ -1.3
NEDD1-211ENST00000557454 DNAAF1Q8NEP3 725 aa6.9□□□□□ -1.3
NEDD1-211ENST00000557454 MRGPRDQ8TDS7 321 aa6.9□□□□□ -1.3
NEDD1-211ENST00000557454 CCDC140Q96MF4 163 aa6.9□□□□□ -1.3
NEDD1-211ENST00000557454 RDH12Q96NR8 316 aa6.9□□□□□ -1.3
NEDD1-211ENST00000557454 EBF4Q9BQW3 602 aa6.9□□□□□ -1.3
NEDD1-211ENST00000557454 ZNF251Q9BRH9 671 aa6.9□□□□□ -1.3
NEDD1-211ENST00000557454 PEF1Q9UBV8 284 aaKnown RBP6.9□□□□□ -1.3
NEDD1-211ENST00000557454 KIF25Q9UIL4 384 aa6.9□□□□□ -1.3
NEDD1-211ENST00000557454 TRAV39A0A0B4J263 110 aa6.89□□□□□ -1.31
NEDD1-211ENST00000557454 TMEM269A0A1B0GVZ9 245 aa6.89□□□□□ -1.31
NEDD1-211ENST00000557454 SLC33A1O00400 549 aaPredicted RBP6.89□□□□□ -1.31
NEDD1-211ENST00000557454 HSPB6O14558 160 aa6.89□□□□□ -1.31
NEDD1-211ENST00000557454 SLC31A2O15432 143 aa6.89□□□□□ -1.31
NEDD1-211ENST00000557454 TXNL1O43396 289 aa6.89□□□□□ -1.31
NEDD1-211ENST00000557454 SELENOFO60613 162 aa6.89□□□□□ -1.31
NEDD1-211ENST00000557454 BLVRAP53004 296 aa6.89□□□□□ -1.31
NEDD1-211ENST00000557454 TMEM267Q0VDI3 215 aaPredicted RBP6.89□□□□□ -1.31
NEDD1-211ENST00000557454 TM4SF20Q53R12 229 aa6.89□□□□□ -1.31
NEDD1-211ENST00000557454 SERTAD4-AS1Q5TG53 156 aa6.89□□□□□ -1.31
NEDD1-211ENST00000557454 ZNF660Q6AZW8 331 aaPredicted RBP6.89□□□□□ -1.31
NEDD1-211ENST00000557454 FKBP9P1Q75LS8 142 aa6.89□□□□□ -1.31
NEDD1-211ENST00000557454 TMEM179BQ7Z7N9 219 aa6.89□□□□□ -1.31
NEDD1-211ENST00000557454 TMEM61Q8N0U2 210 aa6.89□□□□□ -1.31
NEDD1-211ENST00000557454 LINC00311Q8N616 119 aa6.89□□□□□ -1.31
NEDD1-211ENST00000557454 ZNF565Q8N9K5 539 aa6.89□□□□□ -1.31
NEDD1-211ENST00000557454 LFNGQ8NES3 379 aa6.89□□□□□ -1.31
NEDD1-211ENST00000557454 OTOSQ8NHW6 89 aa6.89□□□□□ -1.31
NEDD1-211ENST00000557454 FUZQ9BT04 418 aa6.89□□□□□ -1.31
NEDD1-211ENST00000557454 MED20Q9H944 212 aa6.89□□□□□ -1.31
NEDD1-211ENST00000557454 HMG20AQ9NP66 347 aa6.89□□□□□ -1.31
NEDD1-211ENST00000557454 GAB2Q9UQC2 676 aa6.89□□□□□ -1.31
NEDD1-211ENST00000557454 KIR2DL5BA0A0G2JN68 375 aa6.88□□□□□ -1.31
NEDD1-211ENST00000557454 KIR2DL5BA0A0G2JPC4 375 aa6.88□□□□□ -1.31
NEDD1-211ENST00000557454 FAM220BPB1ANY3 271 aa6.88□□□□□ -1.31
NEDD1-211ENST00000557454 FXYD1O00168 92 aa6.88□□□□□ -1.31
NEDD1-211ENST00000557454 DIRAS1O95057 198 aa6.88□□□□□ -1.31
NEDD1-211ENST00000557454 CSTBP04080 98 aaKnown RBP6.88□□□□□ -1.31
NEDD1-211ENST00000557454 C21orf33P30042 268 aaPredicted RBP6.88□□□□□ -1.31
NEDD1-211ENST00000557454 UBE2V2Q15819 145 aa6.88□□□□□ -1.31
NEDD1-211ENST00000557454 AKIRIN2Q53H80 203 aa6.88□□□□□ -1.31
NEDD1-211ENST00000557454 SPATA12Q7Z6I5 190 aa6.88□□□□□ -1.31
NEDD1-211ENST00000557454 ZDHHC13Q8IUH4 622 aa6.88□□□□□ -1.31
NEDD1-211ENST00000557454 KIR2DL5AQ8N109 375 aa6.88□□□□□ -1.31
NEDD1-211ENST00000557454 ANKRD42Q8N9B4 389 aa6.88□□□□□ -1.31
NEDD1-211ENST00000557454 POC5Q8NA72 575 aa6.88□□□□□ -1.31
NEDD1-211ENST00000557454 OR10A7Q8NGE5 316 aa6.88□□□□□ -1.31
NEDD1-211ENST00000557454 OR8J3Q8NGG0 315 aa6.88□□□□□ -1.31
NEDD1-211ENST00000557454 OR8D4Q8NGM9 314 aa6.88□□□□□ -1.31
NEDD1-211ENST00000557454 KIR2DL5BQ8NHK3 375 aa6.88□□□□□ -1.31
NEDD1-211ENST00000557454 RARRES2Q99969 163 aa6.88□□□□□ -1.31
NEDD1-211ENST00000557454 RNF126Q9BV68 326 aa6.88□□□□□ -1.31
NEDD1-211ENST00000557454 PARP12Q9H0J9 701 aaKnown RBP6.88□□□□□ -1.31
NEDD1-211ENST00000557454 RNF150Q9ULK6 438 aa6.88□□□□□ -1.31
NEDD1-211ENST00000557454 PLA2G2DQ9UNK4 145 aa6.88□□□□□ -1.31
NEDD1-211ENST00000557454 DHDHQ9UQ10 334 aa6.88□□□□□ -1.31
NEDD1-211ENST00000557454 CDH10Q9Y6N8 788 aa6.88□□□□□ -1.31
NEDD1-211ENST00000557454 V9GYS6 101 aa6.88□□□□□ -1.31
NEDD1-211ENST00000557454 A0A0G2JLM5 398 aa6.87□□□□□ -1.31
NEDD1-211ENST00000557454 ACOD1A6NK06 481 aa6.87□□□□□ -1.31
NEDD1-211ENST00000557454 B2RBV5 119 aa6.87□□□□□ -1.31
NEDD1-211ENST00000557454 LOC110117498-PIK3R3F6TDL0 507 aa6.87□□□□□ -1.31
NEDD1-211ENST00000557454 SCAF4O95104 1147 aaKnown RBP6.87□□□□□ -1.31
NEDD1-211ENST00000557454 AMBPP02760 352 aa6.87□□□□□ -1.31
NEDD1-211ENST00000557454 TTRP02766 147 aa6.87□□□□□ -1.31
NEDD1-211ENST00000557454 FOLR2P14207 255 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms