RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 A6NDX4 124 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 OOSP1A8MZH6 123 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 BUB1B-PAK6H3BSN5 160 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 M0QZK8 103 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 CDRT1O95170 752 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 CELP19835 753 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 SERPINA2P20848 420 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 VDAC2P45880 294 aaPredicted RBP5.9□□□□□ -1.47
SCFD1-222ENST00000556768 OR3A4PP47883 348 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 ADARB1P78563 741 aaKnown RBP5.9□□□□□ -1.47
SCFD1-222ENST00000556768 MADCAM1Q13477 382 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 MPV17LQ2QL34 196 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 PIGYQ3MUY2 71 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 ATAD3CQ5T2N8 411 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 DMKNQ6E0U4 476 aaPredicted RBP5.9□□□□□ -1.47
SCFD1-222ENST00000556768 XAF1Q6GPH4 301 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 CRIP3Q6Q6R5 217 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 SLC16A12Q6ZSM3 486 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 TCF23Q7RTU1 214 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 CDH26Q8IXH8 852 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 DYNAPQ8N1N2 210 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 C11orf44Q8N8P7 122 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 Q8NFD4 153 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 OR10A7Q8NGE5 316 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 OR4P4Q8NGL7 312 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 OR10K1Q8NGX5 313 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 OR10X1Q8NGY0 326 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 MUL1Q969V5 352 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 DPCDQ9BVM2 203 aaPredicted RBP5.9□□□□□ -1.47
SCFD1-222ENST00000556768 IL36GQ9NZH8 169 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 KIF25Q9UIL4 384 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 SIGLEC9Q9Y336 463 aa5.9□□□□□ -1.47
SCFD1-222ENST00000556768 TRAV24A0A0B4J272 114 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 PNMA8CA0A1B0GUJ8 204 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 TMEM30CPA0ZSE6 113 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 FAM172BPA6NC97 362 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 MCRIP1C9JLW8 97 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 PTGES3LE9PB15 166 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 CHST1O43916 411 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 MMP23AO75900 390 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 IGLV1-47P01700 117 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 CD34P28906 385 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 WNT4P56705 351 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 RBM11P57052 281 aaKnown RBP5.89□□□□□ -1.47
SCFD1-222ENST00000556768 KRTAP10-3P60369 221 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 PAX5Q02548 391 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 CD69Q07108 199 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 DOC2BQ14184 412 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 HLA-DRB5Q30154 266 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 NHLRC3Q5JS37 347 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 OGFRL1Q5TC84 451 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-222ENST00000556768 ASCL4Q6XD76 172 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 AHSA2Q719I0 299 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 RNF144BQ7Z419 303 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 CENPVQ7Z7K6 275 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-222ENST00000556768 MS4A15Q8N5U1 240 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 SUMF2Q8NBJ7 301 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 RGP1Q92546 391 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-222ENST00000556768 MYDGFQ969H8 173 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 MISP3Q96FF7 219 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 COQ2Q96H96 371 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 OR5M11Q96RB7 305 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 MND1Q9BWT6 205 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 MMP28Q9H239 520 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 VCX3BQ9H321 246 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 PLCXD1Q9NUJ7 323 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 CALYQ9NYX4 217 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 IDI2-AS1Q9NZ38 188 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 PSORS1C1Q9UIG5 152 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 FOXJ3Q9UPW0 622 aa5.89□□□□□ -1.47
SCFD1-222ENST00000556768 A0A087X0M5 115 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 A0A1B0GX30 115 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 A0A1W2PPK0 400 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 FAM90A22PA8MWA6 464 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 J3QR06 171 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 GEMIN2O14893 280 aaKnown RBP5.88□□□□□ -1.47
SCFD1-222ENST00000556768 CASQ2O14958 399 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-222ENST00000556768 SPINT2O43291 252 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 XPNPEP2O43895 674 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 GPX5O75715 221 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 LY86O95711 162 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 IL1AP01583 271 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 MAS1P04201 325 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 GNAO1P09471 354 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 RPS16P62249 146 aaKnown RBP5.88□□□□□ -1.47
SCFD1-222ENST00000556768 BLCAPP62952 87 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 HES1Q14469 280 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 LTC4SQ16873 150 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 AWAT2Q6E213 333 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 CCBE1Q6UXH8 406 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-222ENST00000556768 Q8N2B8 174 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 NKAIN3Q8N8D7 197 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 ZFP41Q8N8Y5 198 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 OR4F17Q8NGA8 305 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 RFESDQ8TAC1 157 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 MRGPRDQ8TDS7 321 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 TOMM40LQ969M1 308 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 ARL11Q969Q4 196 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 KIRREL1Q96J84 757 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 OR14A2Q96R54 314 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms