RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 ADCYAP1P18509 176 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 RCC1P18754 421 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-241ENST00000556374 PTAFRP25105 342 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 ITGA3P26006 1051 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 LPAR6P43657 344 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 HTR5AP47898 357 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 P2RY1P47900 373 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 NPBWR1P48145 328 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 RBP2P50120 134 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 SSR4P51571 173 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 P2RY4P51582 365 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 MTCP1P56278 107 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 PIGPP57054 158 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 FXYD4P59646 89 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 RAB1AP62820 205 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 RBM39Q14498 530 aaKnown RBP3.78□□□□□ -1.8
ATXN3-241ENST00000556374 DAZAP2Q15038 168 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-241ENST00000556374 MIDNQ504T8 468 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 C10orf91Q5T1B1 145 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 PRAMEF20Q5VT98 475 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 SHEQ5VZ18 495 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 GGNBP1Q5YKI7 109 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 PLCXD3Q63HM9 321 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 LCN10Q6JVE6 187 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 SLC25A24Q6NUK1 477 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 DHRS13Q6UX07 377 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 TMEM108Q6UXF1 575 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 TMPPEQ6ZT21 453 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 FOXL2NBQ6ZUU3 175 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 SLC16A14Q7RTX9 510 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 OSR2Q8N2R0 312 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 LRRC18Q8N456 261 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 FAM89BQ8N5H3 189 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 TMEM156Q8N614 296 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 FADS6Q8N9I5 356 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 SUMF2Q8NBJ7 301 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 UBAC2Q8NBM4 344 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 NFAM1Q8NET5 270 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-241ENST00000556374 OR5L1Q8NGL2 311 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 OR14L1PQ8NHC6 308 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 RNASE11Q8TAA1 199 aaKnown RBP3.78□□□□□ -1.8
ATXN3-241ENST00000556374 FAM213BQ8TBF2 198 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 CD300LFQ8TDQ1 290 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 RXFP4Q8TDU9 374 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 GLYATL2Q8WU03 294 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 RNF138Q8WVD3 245 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 KCNE4Q8WWG9 221 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 MAFIPQ8WZ33 124 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 ROBO4Q8WZ75 1007 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 TMEM54Q969K7 222 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 NTNG2Q96CW9 530 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 C14orf79Q96F83 325 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 REEP6Q96HR9 211 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 ABHD14BQ96IU4 210 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 RTBDNQ9BSG5 229 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-241ENST00000556374 RNF126Q9BV68 326 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 SF3B5Q9BWJ5 86 aaKnown RBP3.78□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF442Q9H7R0 627 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 WDR54Q9H977 334 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 FN3KRPQ9HA64 309 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 KCNJ16Q9NPI9 418 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 PNRC2Q9NPJ4 139 aaKnown RBP3.78□□□□□ -1.8
ATXN3-241ENST00000556374 CYTL1Q9NRR1 136 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 GPR173Q9NS66 373 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 C19orf12Q9NSK7 152 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 HSF4Q9ULV5 492 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 RCL1Q9Y2P8 373 aaKnown RBP3.78□□□□□ -1.8
ATXN3-241ENST00000556374 FAM96BQ9Y3D0 163 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 KLF2Q9Y5W3 355 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-241ENST00000556374 SLCO1B1Q9Y6L6 691 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 IGKV1-9A0A0C4DH69 117 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 ZNF816-ZNF321PA0A0X1KG74 233 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 A0A1W2PP11 408 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 DUXBA0A1W2PPF3 345 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 LRP5LA4QPB2 252 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 OR5H15A6NDH6 313 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 BTBD17A6NE02 478 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 UMAD1C9J7I0 102 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 PRSS44E7EML9 344 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 NME2P1O60361 137 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 PDCD6O75340 191 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 PITX3O75364 302 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 CDS2O95674 445 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 CER1O95813 267 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 NRASP01111 189 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 IFNA1P01562 189 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 IFNA17P01571 189 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 IGLV3-1P01715 115 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 IGHEP01854 428 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 HBE1P02100 147 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 MT-ND4LP03901 98 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 OPN1LWP04000 364 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 SNRNP70P08621 437 aaKnown RBP3.77□□□□□ -1.81
ATXN3-241ENST00000556374 CD63P08962 238 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 CST2P09228 141 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 OR5AC1P0C628 307 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 SPP1P10451 314 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 FOLR2P14207 255 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 LIFP15018 202 aa3.77□□□□□ -1.81
ATXN3-241ENST00000556374 ZNF708P17019 499 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms