RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 PRPF19Q9UMS4 504 aaKnown RBP3.17□□□□□ -1.9
PRPF39-209ENST00000556353 COPS3Q9UNS2 423 aa3.17□□□□□ -1.9
PRPF39-209ENST00000556353 ZNF835Q9Y2P0 537 aa3.17□□□□□ -1.9
PRPF39-209ENST00000556353 CSDC2Q9Y534 153 aaKnown RBP3.17□□□□□ -1.9
PRPF39-209ENST00000556353 FLVCR1Q9Y5Y0 555 aa3.17□□□□□ -1.9
PRPF39-209ENST00000556353 TGP01266 2768 aa3.17□□□□□ -1.9
PRPF39-209ENST00000556353 MALRD1Q5VYJ5 2156 aa3.17□□□□□ -1.9
PRPF39-209ENST00000556353 IGKV3D-11A0A0A0MRZ8 115 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 TRAV17A0A0B4J275 112 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 OR11H12B2RN74 326 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 TSTD3H0UI37 97 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 TEX46H3BTG2 121 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 DLEU1O43261 78 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 TPST2O60704 377 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 SLC19A2O60779 497 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 AQP8O94778 261 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 WISP3O95389 354 aaPredicted RBP3.16□□□□□ -1.9
PRPF39-209ENST00000556353 NUDT17P0C025 328 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 PET100P0DJ07 73 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 RD3LP0DJH9 198 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 NPR2P20594 1047 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 UQCRC2P22695 453 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 ELK4P28324 431 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 HTR1EP28566 365 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 CMPK1P30085 196 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 GNRHRP30968 328 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 RPA3P35244 121 aaPredicted RBP3.16□□□□□ -1.9
PRPF39-209ENST00000556353 CFHR2P36980 270 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 RFC3P40938 356 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 CRYBB2P43320 205 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 CCR6P51684 374 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 RPL19P84098 196 aaKnown RBP3.16□□□□□ -1.9
PRPF39-209ENST00000556353 TFF3Q07654 80 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 AESQ08117 197 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 PUDPQ08623 228 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 APOFQ13790 326 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 FAM53BQ14153 422 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 GRK1Q15835 563 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 NDUFA9Q16795 377 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 ZNF630Q2M218 657 aaPredicted RBP3.16□□□□□ -1.9
PRPF39-209ENST00000556353 SFT2D3Q587I9 215 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 RNASE10Q5GAN6 216 aaKnown RBP3.16□□□□□ -1.9
PRPF39-209ENST00000556353 GCSAMLQ5JQS6 135 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 FAM45BPQ6NSW5 357 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 ACSM5Q6NUN0 579 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 MED27Q6P2C8 311 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 CD164L2Q6UWJ8 174 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 SBSNQ6UWP8 590 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 DPY19L2P2Q6ZN68 376 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 ZNF836Q6ZNA1 936 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 C16orf47Q6ZP98 133 aaPredicted RBP3.16□□□□□ -1.9
PRPF39-209ENST00000556353 FAM220AQ7Z4H9 259 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 RANBP3LQ86VV4 465 aaPredicted RBP3.16□□□□□ -1.9
PRPF39-209ENST00000556353 SLC22A16Q86VW1 577 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 RIMKLAQ8IXN7 391 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 PGAM4Q8N0Y7 254 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 CADM2Q8N3J6 435 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 LRRC18Q8N456 261 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 CLDN22Q8N7P3 220 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 C8orf31Q8N9H6 132 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 OR11H1Q8NG94 326 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 OR10W1Q8NGF6 305 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 OR9A2Q8NGT5 310 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 OR11H2Q8NH07 326 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 OR51Q1Q8NH59 317 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 COQ8AQ8NI60 647 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 LGALS14Q8TCE9 139 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 GIPC3Q8TF64 312 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 C11orf40Q8WZ69 217 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 PTH2Q96A98 100 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 TMEM45BQ96B21 275 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 CREB3L1Q96BA8 519 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 RNF170Q96K19 258 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 TMEM56Q96MV1 263 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 GPR137Q96N19 417 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 FOPNLQ96NB1 174 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 TMEM109Q9BVC6 243 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 GGACTQ9BVM4 153 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 ULBP2Q9BZM5 246 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 TPT1P8Q9HAU6 139 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 TMBIM4Q9HC24 238 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 TMEM138Q9NPI0 162 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 SPANXA1Q9NS26 97 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 C14orf105Q9NVL8 296 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 ZNF225Q9UK10 706 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 PDE10AQ9Y233 779 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 TMEM56-RWDD3S4R434 201 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 VWFP04275 2813 aa3.16□□□□□ -1.9
PRPF39-209ENST00000556353 HEATR1Q9H583 2144 aaKnown RBP3.16□□□□□ -1.9
PRPF39-209ENST00000556353 MEGF8Q7Z7M0 2845 aa3.15□□□□□ -1.9
PRPF39-209ENST00000556353 MGAM2Q2M2H8 2515 aa3.15□□□□□ -1.91
PRPF39-209ENST00000556353 TRAV8-7A0A075B6U6 113 aa3.15□□□□□ -1.91
PRPF39-209ENST00000556353 KBTBD11-OT1A0A1B0GTJ5 212 aa3.15□□□□□ -1.91
PRPF39-209ENST00000556353 GJE1A6NN92 205 aa3.15□□□□□ -1.91
PRPF39-209ENST00000556353 B4DXG7 233 aa3.15□□□□□ -1.91
PRPF39-209ENST00000556353 DISC1C4P0D8 188 aa3.15□□□□□ -1.91
PRPF39-209ENST00000556353 CCL21O00585 134 aa3.15□□□□□ -1.91
PRPF39-209ENST00000556353 MAGEB4O15481 346 aaPredicted RBP3.15□□□□□ -1.91
PRPF39-209ENST00000556353 PIAS1O75925 651 aa3.15□□□□□ -1.91
PRPF39-209ENST00000556353 C1QAP02745 245 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms