RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 MS4A10Q96PG2 267 aa9.38□□□□□ -0.91
ACTN1-216ENST00000556083 TTTY12Q9BZ98 90 aa9.38□□□□□ -0.91
ACTN1-216ENST00000556083 BET1LQ9NYM9 111 aa9.38□□□□□ -0.91
ACTN1-216ENST00000556083 SCN9AQ15858 1988 aa9.38□□□□□ -0.91
ACTN1-216ENST00000556083 A0A1W2PQF6 199 aa9.38□□□□□ -0.91
ACTN1-216ENST00000556083 H0Y980 276 aa9.38□□□□□ -0.91
ACTN1-216ENST00000556083 NEURL1O76050 574 aa9.38□□□□□ -0.91
ACTN1-216ENST00000556083 COL8A1P27658 744 aa9.38□□□□□ -0.91
ACTN1-216ENST00000556083 RPL31P62899 125 aaKnown RBP9.38□□□□□ -0.91
ACTN1-216ENST00000556083 RELBQ01201 579 aa9.38□□□□□ -0.91
ACTN1-216ENST00000556083 EIF4EBP2Q13542 120 aaPredicted RBP9.38□□□□□ -0.91
ACTN1-216ENST00000556083 FAM209BQ5JX69 171 aa9.38□□□□□ -0.91
ACTN1-216ENST00000556083 UBALD1Q8TB05 177 aa9.38□□□□□ -0.91
ACTN1-216ENST00000556083 ZNF714Q96N38 554 aa9.38□□□□□ -0.91
ACTN1-216ENST00000556083 PRSS50Q9UI38 385 aa9.38□□□□□ -0.91
ACTN1-216ENST00000556083 MAP1BP46821 2468 aaKnown RBP9.38□□□□□ -0.91
ACTN1-216ENST00000556083 LOC390937A0A1W2PQ73 354 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 MFNGO00587 321 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 PITX3O75364 302 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 HOXA6P31267 233 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 ERVS71-1P61550 626 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 LAMTOR1Q6IAA8 161 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 PQLC2Q6ZP29 291 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 SSX7Q7RTT5 188 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 SYT8Q8NBV8 401 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 PGLYRP3Q96LB9 341 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 ZNF552Q9H707 407 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-216ENST00000556083 SLC25A10Q9UBX3 287 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-216ENST00000556083 NEU3Q9UQ49 428 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 C11orf94C9JXX5 98 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 NPIPB6E9PJ23 425 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 CDIPTO14735 213 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 OR2J3O76001 311 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 EML2O95834 649 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 ASAH2BP0C7U1 165 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 CCL3P10147 92 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 COX6B1P14854 86 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 PLAC9Q5JTB6 97 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 STPG1Q5TH74 334 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 ANKRD34AQ69YU3 496 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 DNM1P46Q6ZS02 220 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 CXorf67Q86X51 503 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-216ENST00000556083 FAM103A1Q9BTL3 118 aaKnown RBP9.37□□□□□ -0.91
ACTN1-216ENST00000556083 SHISA8B8ZZ34 492 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 C3orf80F5H4A9 247 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 CCL21O00585 134 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 TSPAN2O60636 221 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 ONECUT2O95948 504 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 IGHV4-34P06331 123 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 COL25A1Q9BXS0 654 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-216ENST00000556083 MAP1LC3CQ9BXW4 147 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 A8MWL6 223 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 HYPMO75409 117 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 AGFG2O95081 481 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 WISP3O95389 354 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-216ENST00000556083 SELENOPP49908 381 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 B2MP61769 119 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 C9orf40Q8IXQ3 194 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 TMEM45BQ96B21 275 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 TMUB1Q9BVT8 246 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 PRDM14Q9GZV8 571 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 PARD6AQ9NPB6 346 aa9.37□□□□□ -0.91
ACTN1-216ENST00000556083 CDRT15L2A8MXV6 281 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 J3QR06 171 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 S1PR2O95136 353 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 GYPAP02724 150 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 PRF1P14222 555 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 PRDX2P32119 198 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 RPL27AP46776 148 aaKnown RBP9.36□□□□□ -0.91
ACTN1-216ENST00000556083 ETFDHQ16134 617 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 RNASEKQ6P5S7 137 aaKnown RBP9.36□□□□□ -0.91
ACTN1-216ENST00000556083 SLC23A3Q6PIS1 610 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 Q6ZN92 141 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 ERASQ7Z444 233 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 RHNO1Q9BSD3 238 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 PILRAQ9UKJ1 303 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 HIGD1AQ9Y241 93 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 TTC3P53804 2025 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 CHST1O43916 411 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 CCL4P13236 92 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 ORM2P19652 201 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 CSF2RBP32927 897 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 C19orf57Q0VDD7 668 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 C1orf100Q5SVJ3 147 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 LINC00470Q9BZP3 86 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 RBM38Q9H0Z9 239 aaKnown RBP9.36□□□□□ -0.91
ACTN1-216ENST00000556083 OPN4Q9UHM6 478 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 PTPRZ1P23471 2315 aaPredicted RBP9.36□□□□□ -0.91
ACTN1-216ENST00000556083 IGHV3-64DA0A0J9YX35 117 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 HELTA6NFD8 242 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 VSIG8P0DPA2 414 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 ACAA2P42765 397 aaKnown RBP9.36□□□□□ -0.91
ACTN1-216ENST00000556083 RTP5Q14D33 572 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 ALKBH6Q3KRA9 238 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 PAPPA-AS1Q5QFB9 102 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 FAM78BQ5VT40 261 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 LRP11Q86VZ4 500 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 GAPTQ8N292 157 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 OR1B1Q8NGR6 318 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 PCNPQ8WW12 178 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms