RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 SEC22AQ96IW7 307 aa6.99□□□□□ -1.29
ATXN3-235ENST00000556082 RHOVQ96L33 236 aa6.99□□□□□ -1.29
ATXN3-235ENST00000556082 VKORC1Q9BQB6 163 aa6.99□□□□□ -1.29
ATXN3-235ENST00000556082 MFFQ9GZY8 342 aa6.99□□□□□ -1.29
ATXN3-235ENST00000556082 ASF1BQ9NVP2 202 aa6.99□□□□□ -1.29
ATXN3-235ENST00000556082 TNFSF18Q9UNG2 199 aa6.99□□□□□ -1.29
ATXN3-235ENST00000556082 WIPI2Q9Y4P8 454 aa6.99□□□□□ -1.29
ATXN3-235ENST00000556082 CUL9Q8IWT3 2517 aa6.99□□□□□ -1.29
ATXN3-235ENST00000556082 GTF3C1Q12789 2109 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 FXYD6-FXYD2A0A087WZ82 144 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 IGKV1-6A0A0C4DH72 117 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 C5orf51A6NDU8 294 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 MPPED1O15442 326 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 HAND1O96004 215 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 BMP5P22003 454 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 CD40P25942 277 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 SSTR2P30874 369 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 GNRHRP30968 328 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 KLF3P57682 345 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-235ENST00000556082 LINC00310P59036 64 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 SELENOVP59797 346 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 HLA-DRB3P79483 266 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 FAM27E3Q08E93 113 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 TMEM187Q14656 261 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 HERPUD1Q15011 391 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 SLC35E4Q6ICL7 350 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 ACP7Q6ZNF0 438 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 H1FOOQ8IZA3 346 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-235ENST00000556082 BATF2Q8N1L9 274 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 RDH5Q92781 318 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 C18orf12Q96KH6 178 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 DMRTA2Q96SC8 542 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 RNF126Q9BV68 326 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 TOLLIPQ9H0E2 274 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 METTL8Q9H825 291 aaKnown RBP6.98□□□□□ -1.29
ATXN3-235ENST00000556082 SLC2A9Q9NRM0 540 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 TAAR3PQ9P1P4 343 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 MEMO1Q9Y316 297 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 MAB21L2Q9Y586 359 aa6.98□□□□□ -1.29
ATXN3-235ENST00000556082 AKAP13Q12802 2813 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 C13orf42A0A1B0GVH6 325 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 TMEM30CPA0ZSE6 113 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 LINC00862A6NCI5 91 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 FAM25EA8MYX2 175 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 EEF1E1-BLOC1S5C9J1V9 151 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-235ENST00000556082 GPR31O00270 319 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 CCSO14618 274 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 TSC22D2O75157 780 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 ADAP1O75689 374 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 RP2O75695 350 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 LHBP01229 141 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 IFNA21P01568 189 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 HEXAP06865 529 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 ADH4P08319 380 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 PET100P0DJ07 73 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 CCKARP32238 428 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 HTR2BP41595 481 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 KLRB1Q12918 225 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 HMGN3Q15651 99 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 IGFBP7Q16270 282 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 SMIM21Q3B7S5 101 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 CLLU1Q5K131 121 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 PRSS54Q6PEW0 395 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 TMEM108Q6UXF1 575 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 SLC51BQ86UW2 128 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 LGI3Q8N145 548 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 ZNF565Q8N9K5 539 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 INO80EQ8NBZ0 244 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-235ENST00000556082 RELL2Q8NC24 303 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-235ENST00000556082 OR10J5Q8NHC4 309 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 GLYATL2Q8WU03 294 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 RND1Q92730 232 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 TOMM40LQ969M1 308 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 ERGIC1Q969X5 290 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 MSI2Q96DH6 328 aaKnown RBP6.97□□□□□ -1.29
ATXN3-235ENST00000556082 AKR1E2Q96JD6 320 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 TMEM56Q96MV1 263 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 ARL6Q9H0F7 186 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 NCOR1P1Q9H4R4 102 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 MSL2Q9HCI7 577 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 ZFP57Q9NU63 452 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 DNAJB11Q9UBS4 358 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 UBQLN2Q9UHD9 624 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 ZDHHC8Q9ULC8 765 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 OR2W1Q9Y3N9 320 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 TMEM56-RWDD3S4R434 201 aa6.97□□□□□ -1.29
ATXN3-235ENST00000556082 INTS1Q8N201 2190 aaKnown RBP6.96□□□□□ -1.29
ATXN3-235ENST00000556082 DUXBA0A1W2PPF3 345 aa6.96□□□□□ -1.3
ATXN3-235ENST00000556082 SRRM5B3KS81 715 aa6.96□□□□□ -1.3
ATXN3-235ENST00000556082 SIRPB1O00241 398 aa6.96□□□□□ -1.3
ATXN3-235ENST00000556082 BET1O15155 118 aa6.96□□□□□ -1.3
ATXN3-235ENST00000556082 CFDP00746 253 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-235ENST00000556082 OR5AC1P0C628 307 aa6.96□□□□□ -1.3
ATXN3-235ENST00000556082 RCC1P18754 421 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-235ENST00000556082 FXYD4P59646 89 aa6.96□□□□□ -1.3
ATXN3-235ENST00000556082 EXOSC2Q13868 293 aaKnown RBP6.96□□□□□ -1.3
ATXN3-235ENST00000556082 MSMO1Q15800 293 aa6.96□□□□□ -1.3
ATXN3-235ENST00000556082 CR1LQ2VPA4 569 aa6.96□□□□□ -1.3
ATXN3-235ENST00000556082 FBXL19-AS1Q494R0 122 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms