RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 GALMQ96C23 342 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 COQ2Q96H96 371 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 Q96MF0 132 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 HDHD3Q9BSH5 251 aaPredicted RBP9.3□□□□□ -0.92
SHMT2-220ENST00000555634 SHARPINQ9H0F6 387 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 Q9N2K0 584 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 MCUBQ9NWR8 336 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 TAS2R3Q9NYW6 316 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 ZNF581Q9P0T4 197 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 ANXA10Q9UJ72 324 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 APCP25054 2843 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 A8MXK9 166 aa9.29□□□□□ -0.92
SHMT2-220ENST00000555634 VWC2LB2RUY7 222 aa9.29□□□□□ -0.92
SHMT2-220ENST00000555634 FABP7O15540 132 aa9.29□□□□□ -0.92
SHMT2-220ENST00000555634 ORC5O43913 435 aa9.29□□□□□ -0.92
SHMT2-220ENST00000555634 SSX5O60225 188 aa9.29□□□□□ -0.92
SHMT2-220ENST00000555634 RAB3DO95716 219 aa9.29□□□□□ -0.92
SHMT2-220ENST00000555634 RBP4P02753 201 aa9.29□□□□□ -0.92
SHMT2-220ENST00000555634 MT-ND4P03905 459 aa9.29□□□□□ -0.92
SHMT2-220ENST00000555634 INHBBP09529 407 aa9.29□□□□□ -0.92
SHMT2-220ENST00000555634 PTHLHP12272 177 aa9.29□□□□□ -0.92
SHMT2-220ENST00000555634 CDK10Q15131 360 aa9.29□□□□□ -0.92
SHMT2-220ENST00000555634 STEAP1BQ6NZ63 245 aa9.29□□□□□ -0.92
SHMT2-220ENST00000555634 GAPTQ8N292 157 aa9.29□□□□□ -0.92
SHMT2-220ENST00000555634 OR5AP2Q8NGF4 316 aa9.29□□□□□ -0.92
SHMT2-220ENST00000555634 OR10J5Q8NHC4 309 aa9.29□□□□□ -0.92
SHMT2-220ENST00000555634 TRIM63Q969Q1 353 aa9.29□□□□□ -0.92
SHMT2-220ENST00000555634 DMRTB1Q96MA1 342 aa9.29□□□□□ -0.92
SHMT2-220ENST00000555634 PRRT1Q99946 306 aa9.29□□□□□ -0.92
SHMT2-220ENST00000555634 DCTN5Q9BTE1 182 aa9.29□□□□□ -0.92
SHMT2-220ENST00000555634 MBNL3Q9NUK0 354 aaKnown RBP9.29□□□□□ -0.92
SHMT2-220ENST00000555634 CALYQ9NYX4 217 aa9.29□□□□□ -0.92
SHMT2-220ENST00000555634 EHFQ9NZC4 300 aa9.29□□□□□ -0.92
SHMT2-220ENST00000555634 ONECUT1Q9UBC0 465 aa9.29□□□□□ -0.92
SHMT2-220ENST00000555634 KLK11Q9UBX7 282 aa9.29□□□□□ -0.92
SHMT2-220ENST00000555634 RPUSD1Q9UJJ7 312 aaKnown RBP9.29□□□□□ -0.92
SHMT2-220ENST00000555634 SCP2D1Q9UJQ7 156 aa9.29□□□□□ -0.92
SHMT2-220ENST00000555634 RBMX2Q9Y388 322 aaKnown RBP9.29□□□□□ -0.92
SHMT2-220ENST00000555634 KIAA2026Q5HYC2 2103 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 PPIAL4CA0A0B4J2A2 164 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 A0A1B0GW55 424 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 ANKRD20A5PA0PJZ0 165 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 B4DSR2 109 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 SDCBPO00560 298 aaPredicted RBP9.28□□□□□ -0.92
SHMT2-220ENST00000555634 DUX4L2P0CJ85 424 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 DUX4L3P0CJ86 424 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 DUX4L4P0CJ87 422 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 DUX4L5P0CJ88 424 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 DUX4L6P0CJ89 424 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 DUX4L7P0CJ90 424 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 PPIAL4GP0DN37 164 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 ZBTB25P24278 435 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 HLA-DMAP28067 261 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 S100GP29377 79 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 HRH1P35367 487 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 RBMXP38159 391 aaKnown RBP9.28□□□□□ -0.92
SHMT2-220ENST00000555634 ECI1P42126 302 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 HERV-K104P61576 105 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 SEC61A1P61619 476 aaKnown RBP9.28□□□□□ -0.92
SHMT2-220ENST00000555634 DYRK1AQ13627 763 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 HMGN3Q15651 99 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 METTL11BQ5VVY1 283 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 OR52W1Q6IF63 320 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 DUX4L9Q6RFH8 374 aaPredicted RBP9.28□□□□□ -0.92
SHMT2-220ENST00000555634 ZNF782Q6ZMW2 699 aaPredicted RBP9.28□□□□□ -0.92
SHMT2-220ENST00000555634 DNM1P46Q6ZS02 220 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 ARRDC1Q8N5I2 433 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 KIR3DL3Q8N743 410 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 TPRX1Q8N7U7 411 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 OR10A7Q8NGE5 316 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 ENKURQ8TC29 256 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 ARL11Q969Q4 196 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 TAF9BQ9HBM6 251 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 C19orf12Q9NSK7 152 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 GNG12Q9UBI6 72 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 DUX4Q9UBX2 424 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 ZNF230Q9UIE0 474 aaPredicted RBP9.28□□□□□ -0.92
SHMT2-220ENST00000555634 JPT1Q9UK76 154 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 ELF5Q9UKW6 265 aaPredicted RBP9.28□□□□□ -0.92
SHMT2-220ENST00000555634 ANAPC10Q9UM13 185 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 SPG11Q96JI7 2443 aa9.28□□□□□ -0.92
SHMT2-220ENST00000555634 NBPF19A0A087WUL8 3843 aa9.27□□□□□ -0.92
SHMT2-220ENST00000555634 IGHV4-61A0A0C4DH41 118 aa9.27□□□□□ -0.93
SHMT2-220ENST00000555634 KBTBD11-OT1A0A1B0GTJ5 212 aa9.27□□□□□ -0.93
SHMT2-220ENST00000555634 LINC00854A0A1B0GVQ3 168 aa9.27□□□□□ -0.93
SHMT2-220ENST00000555634 TNFRSF13BO14836 293 aaPredicted RBP9.27□□□□□ -0.93
SHMT2-220ENST00000555634 BET1O15155 118 aa9.27□□□□□ -0.93
SHMT2-220ENST00000555634 PHF1O43189 567 aaPredicted RBP9.27□□□□□ -0.93
SHMT2-220ENST00000555634 AMY2AP04746 511 aa9.27□□□□□ -0.93
SHMT2-220ENST00000555634 FCER2P06734 321 aa9.27□□□□□ -0.93
SHMT2-220ENST00000555634 ZNF728P0DKX0 622 aa9.27□□□□□ -0.93
SHMT2-220ENST00000555634 GATA3P23771 443 aa9.27□□□□□ -0.93
SHMT2-220ENST00000555634 FPR2P25090 351 aa9.27□□□□□ -0.93
SHMT2-220ENST00000555634 SSTR5P35346 364 aa9.27□□□□□ -0.93
SHMT2-220ENST00000555634 GZMKP49863 264 aa9.27□□□□□ -0.93
SHMT2-220ENST00000555634 ERVFRD-1P60508 538 aa9.27□□□□□ -0.93
SHMT2-220ENST00000555634 LCN2P80188 198 aa9.27□□□□□ -0.93
SHMT2-220ENST00000555634 LOXL1Q08397 574 aaPredicted RBP9.27□□□□□ -0.93
SHMT2-220ENST00000555634 ZNF880Q6PDB4 577 aa9.27□□□□□ -0.93
SHMT2-220ENST00000555634 RTN4RL2Q86UN3 420 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms