RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 TIMD4Q96H15 378 aa8.28□□□□□ -1.08
PSEN1-213ENST00000555386 SMR3AQ99954 134 aa8.28□□□□□ -1.08
PSEN1-213ENST00000555386 FGF23Q9GZV9 251 aaPredicted RBP8.28□□□□□ -1.08
PSEN1-213ENST00000555386 MFFQ9GZY8 342 aa8.28□□□□□ -1.08
PSEN1-213ENST00000555386 ARL6Q9H0F7 186 aa8.28□□□□□ -1.08
PSEN1-213ENST00000555386 FN3KRPQ9HA64 309 aa8.28□□□□□ -1.08
PSEN1-213ENST00000555386 COMMD9Q9P000 198 aa8.28□□□□□ -1.08
PSEN1-213ENST00000555386 SHPKQ9UHJ6 478 aa8.28□□□□□ -1.08
PSEN1-213ENST00000555386 MPC1Q9Y5U8 109 aa8.28□□□□□ -1.08
PSEN1-213ENST00000555386 ABCA2Q9BZC7 2435 aa8.28□□□□□ -1.08
PSEN1-213ENST00000555386 OR5H14A6NHG9 310 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 LRRC30A6NM36 301 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 OR2AT4A6NND4 320 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 CDIPTO14735 213 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 SOCS1O15524 211 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 OR2F2O95006 317 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 SLC25A16P16260 332 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 MGMTP16455 207 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 USF1P22415 310 aaPredicted RBP8.27□□□□□ -1.09
PSEN1-213ENST00000555386 CD80P33681 288 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 CD200P41217 278 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 ECI1P42126 302 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 TMEM33P57088 247 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 IL13RA1P78552 427 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 CYCSP99999 105 aaKnown RBP8.27□□□□□ -1.09
PSEN1-213ENST00000555386 MZT1Q08AG7 82 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 ZNF154Q13106 437 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 PPP1R1AQ13522 171 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 OR2F1Q13607 317 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 CNN3Q15417 329 aaKnown RBP8.27□□□□□ -1.09
PSEN1-213ENST00000555386 SURF2Q15527 256 aaPredicted RBP8.27□□□□□ -1.09
PSEN1-213ENST00000555386 UBE2V2Q15819 145 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 MICBQ29980 383 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 SLC22A6Q4U2R8 563 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 TMEM128Q5BJH2 165 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 CRIP3Q6Q6R5 217 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 Q71RC1 249 aaPredicted RBP8.27□□□□□ -1.09
PSEN1-213ENST00000555386 COMMD7Q86VX2 200 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 SPERTQ8NA61 448 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 OR51T1Q8NGJ9 327 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 OR11L1Q8NGX0 322 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 ST8SIA4Q92187 359 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 RAB1CQ92928 201 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 WDR89Q96FK6 387 aaPredicted RBP8.27□□□□□ -1.09
PSEN1-213ENST00000555386 TECTBQ96PL2 329 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 SPACA5Q96QH8 159 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 BANF2Q9H503 90 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 WIPI2Q9Y4P8 454 aa8.27□□□□□ -1.09
PSEN1-213ENST00000555386 SONP18583 2426 aaKnown RBP8.27□□□□□ -1.09
PSEN1-213ENST00000555386 IGHV3OR15-7A0A075B7D8 119 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 TRAV14DV4A0A0A6YYC5 116 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 A0A1B0GW55 424 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 A0A1B0GWJ7 208 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 DBX1A6NMT0 343 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 TMEM178BH3BS89 294 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 NDUFS8O00217 210 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 PMP2P02689 132 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 CSN2P05814 226 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 DUX4L2P0CJ85 424 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 DUX4L3P0CJ86 424 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 DUX4L4P0CJ87 422 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 DUX4L5P0CJ88 424 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 DUX4L6P0CJ89 424 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 DUX4L7P0CJ90 424 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 FPR2P25090 351 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 IL2RGP31785 369 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 UBA52P62987 128 aaKnown RBP8.26□□□□□ -1.09
PSEN1-213ENST00000555386 MRPS11P82912 194 aaKnown RBP8.26□□□□□ -1.09
PSEN1-213ENST00000555386 ARFRP1Q13795 201 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 CEACAM21Q3KPI0 293 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 TOR2AQ5JU69 321 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 C11orf87Q6NUJ2 197 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 HAGHLQ6PII5 290 aaPredicted RBP8.26□□□□□ -1.09
PSEN1-213ENST00000555386 RNF144BQ7Z419 303 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 ZNF546Q86UE3 836 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 KCNRGQ8N5I3 272 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 OR5H2Q8NGV7 314 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 LRRC29Q8WV35 223 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 ARHGAP5-AS1Q96IT6 56 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 PDCD10Q9BUL8 212 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 PECRQ9BY49 303 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 LPAR2Q9HBW0 351 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 DUX4Q9UBX2 424 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 TNFSF18Q9UNG2 199 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 GPR132Q9UNW8 380 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 SLC7A11Q9UPY5 501 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.26□□□□□ -1.09
PSEN1-213ENST00000555386 VWC2LB2RUY7 222 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 AMY2BP19961 511 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 BLVRBP30043 206 aaPredicted RBP8.26□□□□□ -1.09
PSEN1-213ENST00000555386 HAAOP46952 286 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 GNG3P63215 75 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 AANATQ16613 207 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 TMEM42Q69YG0 159 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 ASCL4Q6XD76 172 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 C17orf107Q6ZR85 190 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 LHFPL2Q6ZUX7 228 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 LHFPL1Q86WI0 220 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 SCCPDHQ8NBX0 429 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 OR5A2Q8NGI9 324 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms