RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 MIXL1Q9H2W2 232 aa10.4□□□□□ -0.74
SYNE2-219ENST00000555323 GAL3ST2Q9H3Q3 398 aa10.4□□□□□ -0.74
SYNE2-219ENST00000555323 ZMAT3Q9HA38 289 aaKnown RBP10.4□□□□□ -0.74
SYNE2-219ENST00000555323 TRAPPC2LQ9UL33 140 aa10.4□□□□□ -0.74
SYNE2-219ENST00000555323 WNK2Q9Y3S1 2297 aa10.4□□□□□ -0.75
SYNE2-219ENST00000555323 DSCAML1Q8TD84 2053 aa10.39□□□□□ -0.75
SYNE2-219ENST00000555323 TRAV18A0A075B6X5 111 aa10.39□□□□□ -0.75
SYNE2-219ENST00000555323 FSHBP01225 129 aa10.39□□□□□ -0.75
SYNE2-219ENST00000555323 HLA-DQB1P01920 261 aa10.39□□□□□ -0.75
SYNE2-219ENST00000555323 RCC1P18754 421 aaPredicted RBP10.39□□□□□ -0.75
SYNE2-219ENST00000555323 MNDAP41218 407 aa10.39□□□□□ -0.75
SYNE2-219ENST00000555323 FAM120AOSQ5T036 256 aa10.39□□□□□ -0.75
SYNE2-219ENST00000555323 TRAT1Q6PIZ9 186 aa10.39□□□□□ -0.75
SYNE2-219ENST00000555323 TRAPPC6BQ86SZ2 158 aa10.39□□□□□ -0.75
SYNE2-219ENST00000555323 MCFD2Q8NI22 146 aa10.39□□□□□ -0.75
SYNE2-219ENST00000555323 MRGPRDQ8TDS7 321 aa10.39□□□□□ -0.75
SYNE2-219ENST00000555323 CCDC107Q8WV48 283 aa10.39□□□□□ -0.75
SYNE2-219ENST00000555323 AUNIPQ9H7T9 357 aa10.39□□□□□ -0.75
SYNE2-219ENST00000555323 Q9N2K0 584 aa10.39□□□□□ -0.75
SYNE2-219ENST00000555323 C12orf4Q9NQ89 552 aa10.39□□□□□ -0.75
SYNE2-219ENST00000555323 ONECUT1Q9UBC0 465 aa10.39□□□□□ -0.75
SYNE2-219ENST00000555323 MGAT4AQ9UM21 535 aa10.39□□□□□ -0.75
SYNE2-219ENST00000555323 ANK3Q12955 4377 aaKnown RBP10.39□□□□□ -0.75
SYNE2-219ENST00000555323 A0A087X0M5 115 aa10.38□□□□□ -0.75
SYNE2-219ENST00000555323 TRAV39A0A0B4J263 110 aa10.38□□□□□ -0.75
SYNE2-219ENST00000555323 A0A1B0GX30 115 aa10.38□□□□□ -0.75
SYNE2-219ENST00000555323 MEX3AA1L020 520 aaKnown RBP10.38□□□□□ -0.75
SYNE2-219ENST00000555323 F2RL2O00254 374 aa10.38□□□□□ -0.75
SYNE2-219ENST00000555323 MMP23AO75900 390 aa10.38□□□□□ -0.75
SYNE2-219ENST00000555323 CD3GP09693 182 aa10.38□□□□□ -0.75
SYNE2-219ENST00000555323 IGHV1-8P0DP01 117 aa10.38□□□□□ -0.75
SYNE2-219ENST00000555323 DTYMKP23919 212 aa10.38□□□□□ -0.75
SYNE2-219ENST00000555323 BPIFB3P59826 476 aa10.38□□□□□ -0.75
SYNE2-219ENST00000555323 ERVFRD-1P60508 538 aa10.38□□□□□ -0.75
SYNE2-219ENST00000555323 ARFRP1Q13795 201 aa10.38□□□□□ -0.75
SYNE2-219ENST00000555323 TMEM69Q5SWH9 247 aa10.38□□□□□ -0.75
SYNE2-219ENST00000555323 C6orf183Q5T699 404 aa10.38□□□□□ -0.75
SYNE2-219ENST00000555323 OR52W1Q6IF63 320 aa10.38□□□□□ -0.75
SYNE2-219ENST00000555323 Q6ZS49 121 aa10.38□□□□□ -0.75
SYNE2-219ENST00000555323 MOB1BQ7L9L4 216 aa10.38□□□□□ -0.75
SYNE2-219ENST00000555323 VMO1Q7Z5L0 202 aa10.38□□□□□ -0.75
SYNE2-219ENST00000555323 OR52M1Q8NGK5 317 aa10.38□□□□□ -0.75
SYNE2-219ENST00000555323 NANPQ8TBE9 248 aa10.38□□□□□ -0.75
SYNE2-219ENST00000555323 HDHD3Q9BSH5 251 aaPredicted RBP10.38□□□□□ -0.75
SYNE2-219ENST00000555323 PCGF1Q9BSM1 259 aa10.38□□□□□ -0.75
SYNE2-219ENST00000555323 RAB9BQ9NP90 201 aa10.38□□□□□ -0.75
SYNE2-219ENST00000555323 CALYQ9NYX4 217 aa10.38□□□□□ -0.75
SYNE2-219ENST00000555323 ADAM30Q9UKF2 790 aa10.38□□□□□ -0.75
SYNE2-219ENST00000555323 ELF5Q9UKW6 265 aaPredicted RBP10.38□□□□□ -0.75
SYNE2-219ENST00000555323 SVEP1Q4LDE5 3571 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 CENPVL3A0A0U1RRI6 287 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 TMEM235A6NFC5 223 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 C12orf77C9JDV5 145 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 RGS5O15539 181 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 SSX5O60225 188 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 CLPXO76031 633 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 CD34P28906 385 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 TNFSF8P32971 234 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 SSTR5P35346 364 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 GLP1RP43220 463 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 TAS2R20P59543 309 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 MRPS15P82914 257 aaKnown RBP10.37□□□□□ -0.75
SYNE2-219ENST00000555323 HMGN3Q15651 99 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 TMEM30BQ3MIR4 351 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 KLF17Q5JT82 389 aaPredicted RBP10.37□□□□□ -0.75
SYNE2-219ENST00000555323 NCR3LG1Q68D85 454 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 HCP5Q6MZN7 132 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 LAX1Q8IWV1 398 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 C15orf40Q8WUR7 153 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 ARL11Q969Q4 196 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 KIRREL1Q96J84 757 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 SOSTQ9BQB4 213 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 OCSTAMPQ9BR26 566 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 C6orf62Q9GZU0 229 aaPredicted RBP10.37□□□□□ -0.75
SYNE2-219ENST00000555323 HEXA-AS1Q9H8Q6 139 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 TAF9BQ9HBM6 251 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 IDI2-AS1Q9NZ38 188 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 KCNIP1Q9NZI2 227 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 RABL2AQ9UBK7 228 aaPredicted RBP10.37□□□□□ -0.75
SYNE2-219ENST00000555323 RABL2BQ9UNT1 228 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 SESN1Q9Y6P5 492 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 KIAA2026Q5HYC2 2103 aa10.37□□□□□ -0.75
SYNE2-219ENST00000555323 FAM25AB3EWG3 89 aa10.36□□□□□ -0.75
SYNE2-219ENST00000555323 FAM25CB3EWG5 89 aa10.36□□□□□ -0.75
SYNE2-219ENST00000555323 FAM25GB3EWG6 89 aa10.36□□□□□ -0.75
SYNE2-219ENST00000555323 RNASEK-C17orf49H0YIS7 233 aa10.36□□□□□ -0.75
SYNE2-219ENST00000555323 SPINT2O43291 252 aa10.36□□□□□ -0.75
SYNE2-219ENST00000555323 HBZP02008 142 aa10.36□□□□□ -0.75
SYNE2-219ENST00000555323 FCGR3AP08637 254 aa10.36□□□□□ -0.75
SYNE2-219ENST00000555323 OMGP23515 440 aa10.36□□□□□ -0.75
SYNE2-219ENST00000555323 FPR2P25090 351 aa10.36□□□□□ -0.75
SYNE2-219ENST00000555323 TALDO1P37837 337 aa10.36□□□□□ -0.75
SYNE2-219ENST00000555323 GDNFP39905 211 aa10.36□□□□□ -0.75
SYNE2-219ENST00000555323 UBE2E1P51965 193 aa10.36□□□□□ -0.75
SYNE2-219ENST00000555323 LOXL3P58215 753 aa10.36□□□□□ -0.75
SYNE2-219ENST00000555323 HTD2P86397 168 aa10.36□□□□□ -0.75
SYNE2-219ENST00000555323 GUCA2AQ02747 115 aa10.36□□□□□ -0.75
SYNE2-219ENST00000555323 TUSC1Q2TAM9 212 aa10.36□□□□□ -0.75
SYNE2-219ENST00000555323 Q3ZCU0 254 aa10.36□□□□□ -0.75
SYNE2-219ENST00000555323 CNIH2Q6PI25 160 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms