RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 ODF3L1Q8IXM7 274 aa7.65□□□□□ -1.18
SYNE2-217ENST00000555022 VN1R17PQ8TDU5 208 aa7.65□□□□□ -1.18
SYNE2-217ENST00000555022 RCC1LQ96I51 464 aaKnown RBP7.65□□□□□ -1.18
SYNE2-217ENST00000555022 ARV1Q9H2C2 271 aa7.65□□□□□ -1.18
SYNE2-217ENST00000555022 PARD6AQ9NPB6 346 aa7.65□□□□□ -1.18
SYNE2-217ENST00000555022 PRSS50Q9UI38 385 aa7.65□□□□□ -1.18
SYNE2-217ENST00000555022 USF3Q68DE3 2245 aa7.65□□□□□ -1.18
SYNE2-217ENST00000555022 A0A1B0GU03 582 aa7.65□□□□□ -1.18
SYNE2-217ENST00000555022 TRDCB7Z8K6 153 aa7.65□□□□□ -1.18
SYNE2-217ENST00000555022 M0R143 59 aa7.65□□□□□ -1.18
SYNE2-217ENST00000555022 BCAT2O15382 392 aaPredicted RBP7.65□□□□□ -1.18
SYNE2-217ENST00000555022 PSG2P11465 335 aa7.65□□□□□ -1.18
SYNE2-217ENST00000555022 MALLQ13021 153 aa7.65□□□□□ -1.18
SYNE2-217ENST00000555022 ARSJQ5FYB0 599 aaPredicted RBP7.65□□□□□ -1.18
SYNE2-217ENST00000555022 ZNF506Q5JVG8 444 aa7.65□□□□□ -1.18
SYNE2-217ENST00000555022 DEGS2Q6QHC5 323 aa7.65□□□□□ -1.18
SYNE2-217ENST00000555022 MCEMP1Q8IX19 187 aa7.65□□□□□ -1.18
SYNE2-217ENST00000555022 ZNF100Q8IYN0 542 aa7.65□□□□□ -1.18
SYNE2-217ENST00000555022 OR1N1Q8NGS0 311 aa7.65□□□□□ -1.18
SYNE2-217ENST00000555022 MS4A10Q96PG2 267 aa7.65□□□□□ -1.18
SYNE2-217ENST00000555022 OPN3Q9H1Y3 402 aaPredicted RBP7.65□□□□□ -1.18
SYNE2-217ENST00000555022 SLC39A9Q9NUM3 307 aa7.65□□□□□ -1.18
SYNE2-217ENST00000555022 TP53TG5Q9Y2B4 290 aa7.65□□□□□ -1.18
SYNE2-217ENST00000555022 DCHS1Q96JQ0 3298 aa7.65□□□□□ -1.19
SYNE2-217ENST00000555022 ZNF737O75373 536 aa7.65□□□□□ -1.19
SYNE2-217ENST00000555022 CYB5R3P00387 301 aaPredicted RBP7.65□□□□□ -1.19
SYNE2-217ENST00000555022 IGHV4-34P06331 123 aa7.65□□□□□ -1.19
SYNE2-217ENST00000555022 THEM4Q5T1C6 240 aa7.65□□□□□ -1.19
SYNE2-217ENST00000555022 DPPA3Q6W0C5 159 aa7.65□□□□□ -1.19
SYNE2-217ENST00000555022 OR4D5Q8NGN0 318 aa7.65□□□□□ -1.19
SYNE2-217ENST00000555022 DERL1Q9BUN8 251 aa7.65□□□□□ -1.19
SYNE2-217ENST00000555022 ULBP2Q9BZM5 246 aa7.65□□□□□ -1.19
SYNE2-217ENST00000555022 IL23AQ9NPF7 189 aa7.65□□□□□ -1.19
SYNE2-217ENST00000555022 CRIM1Q9NZV1 1036 aa7.65□□□□□ -1.19
SYNE2-217ENST00000555022 RNF24Q9Y225 148 aa7.65□□□□□ -1.19
SYNE2-217ENST00000555022 POLR3KQ9Y2Y1 108 aaPredicted RBP7.65□□□□□ -1.19
SYNE2-217ENST00000555022 CEP250Q9BV73 2442 aa7.65□□□□□ -1.19
SYNE2-217ENST00000555022 A0A096LPE4 126 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 A0A1W2PPZ6 126 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 CEACAM18A8MTB9 384 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 NPIPA2E9PIF3 369 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 NPIPA3F8WFD2 350 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 WDR1O75083 606 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 PITX3O75364 302 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 SERPINE2P07093 398 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 GCH1P30793 250 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 NUBP1P53384 320 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 ZFP36L1Q07352 338 aaKnown RBP7.64□□□□□ -1.19
SYNE2-217ENST00000555022 BSXQ3C1V8 233 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 Q6ZRM9 215 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 SELENOHQ8IZQ5 122 aaKnown RBP7.64□□□□□ -1.19
SYNE2-217ENST00000555022 POC1BQ8TC44 478 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 RHBDD1Q8TEB9 315 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 EXTL1Q92935 676 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 RIMS4Q9H426 269 aaPredicted RBP7.64□□□□□ -1.19
SYNE2-217ENST00000555022 ALKBH4Q9NXW9 302 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 DMDP11532 3685 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 THADAQ6YHU6 1953 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 SPTY2D1-AS1A0A0U1RR47 76 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 F2Z2F3 143 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 CLDN1O95832 211 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 HSPB1P04792 205 aaKnown RBP7.64□□□□□ -1.19
SYNE2-217ENST00000555022 CST2P09228 141 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 FRMD6-AS1P0C7T7 363 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 CDKN1AP38936 164 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 BLKP51451 505 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 ZNF92Q03936 586 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 EXT1Q16394 746 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 GCSAMLQ5JQS6 135 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 OSR2Q8N2R0 312 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 FAM89BQ8N5H3 189 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 CCDC71LQ8N9Z2 235 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 PLPPR1Q8TBJ4 325 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 CCDC74BQ96LY2 380 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 ROS1P08922 2347 aa7.64□□□□□ -1.19
SYNE2-217ENST00000555022 TPRP12270 2363 aaKnown RBP7.64□□□□□ -1.19
SYNE2-217ENST00000555022 PAGE4O60829 102 aa7.63□□□□□ -1.19
SYNE2-217ENST00000555022 TUSC2O75896 110 aa7.63□□□□□ -1.19
SYNE2-217ENST00000555022 LINC00205P59089 165 aa7.63□□□□□ -1.19
SYNE2-217ENST00000555022 KRTDAPP60985 99 aa7.63□□□□□ -1.19
SYNE2-217ENST00000555022 C17orf67Q0P5P2 114 aa7.63□□□□□ -1.19
SYNE2-217ENST00000555022 FOXO1Q12778 655 aa7.63□□□□□ -1.19
SYNE2-217ENST00000555022 KIAA1644Q3SXP7 199 aa7.63□□□□□ -1.19
SYNE2-217ENST00000555022 SYT13Q7L8C5 426 aa7.63□□□□□ -1.19
SYNE2-217ENST00000555022 SLC35E3Q7Z769 313 aa7.63□□□□□ -1.19
SYNE2-217ENST00000555022 ZNF808Q8N4W9 903 aaPredicted RBP7.63□□□□□ -1.19
SYNE2-217ENST00000555022 ATP5SQ99766 215 aa7.63□□□□□ -1.19
SYNE2-217ENST00000555022 SDF2L1Q9HCN8 221 aa7.63□□□□□ -1.19
SYNE2-217ENST00000555022 LYRM2Q9NU23 88 aaPredicted RBP7.63□□□□□ -1.19
SYNE2-217ENST00000555022 TMED3Q9Y3Q3 217 aa7.63□□□□□ -1.19
SYNE2-217ENST00000555022 CACNA1GO43497 2377 aa7.63□□□□□ -1.19
SYNE2-217ENST00000555022 TIAF1O95411 115 aa7.63□□□□□ -1.19
SYNE2-217ENST00000555022 NRASP01111 189 aa7.63□□□□□ -1.19
SYNE2-217ENST00000555022 IGHV3-13P01766 116 aa7.63□□□□□ -1.19
SYNE2-217ENST00000555022 IGHV3-7P01780 117 aa7.63□□□□□ -1.19
SYNE2-217ENST00000555022 TFF1P04155 84 aa7.63□□□□□ -1.19
SYNE2-217ENST00000555022 MSR1P21757 451 aa7.63□□□□□ -1.19
SYNE2-217ENST00000555022 TNFSF10P50591 281 aa7.63□□□□□ -1.19
SYNE2-217ENST00000555022 GPM6AP51674 278 aa7.63□□□□□ -1.19
SYNE2-217ENST00000555022 EIF3IQ13347 325 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms